RNA–Protein interactions for RNA: ENST00000598127.1

PAF1-207, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-207ENST00000598127 SIPA1L1O43166 1804 aa25.09■■□□□ 1.61
PAF1-207ENST00000598127 CTNND1O60716 968 aaKnown RBP25.08■■□□□ 1.61
PAF1-207ENST00000598127 MBD4O95243 580 aa25.08■■□□□ 1.61
PAF1-207ENST00000598127 PLEKHM2Q8IWE5 1019 aa25.08■■□□□ 1.61
PAF1-207ENST00000598127 RNF186Q9NXI6 227 aa25.08■■□□□ 1.61
PAF1-207ENST00000598127 HLA-DOAP06340 250 aa25.07■■□□□ 1.6
PAF1-207ENST00000598127 PPATQ06203 517 aa25.07■■□□□ 1.6
PAF1-207ENST00000598127 OTUD5Q96G74 571 aa25.07■■□□□ 1.6
PAF1-207ENST00000598127 PUS7LQ9H0K6 701 aaKnown RBP25.07■■□□□ 1.6
PAF1-207ENST00000598127 OSBPL3Q9H4L5 887 aa25.07■■□□□ 1.6
PAF1-207ENST00000598127 SAGE1Q9NXZ1 904 aa25.07■■□□□ 1.6
PAF1-207ENST00000598127 FAM196BA6NMK8 535 aa25.06■■□□□ 1.6
PAF1-207ENST00000598127 HSPA8P11142 646 aaKnown RBP25.06■■□□□ 1.6
PAF1-207ENST00000598127 PPIL2Q13356 520 aa25.06■■□□□ 1.6
PAF1-207ENST00000598127 SCYL3Q8IZE3 742 aa25.06■■□□□ 1.6
PAF1-207ENST00000598127 APPBP2Q92624 585 aa25.06■■□□□ 1.6
PAF1-207ENST00000598127 EVI5LQ96CN4 794 aa25.06■■□□□ 1.6
PAF1-207ENST00000598127 MS4A4AQ96JQ5 239 aa25.06■■□□□ 1.6
PAF1-207ENST00000598127 FSD1Q9BTV5 496 aa25.06■■□□□ 1.6
PAF1-207ENST00000598127 NAV1Q8NEY1 1877 aa25.06■■□□□ 1.6
PAF1-207ENST00000598127 DOCK1Q14185 1865 aa25.05■■□□□ 1.6
PAF1-207ENST00000598127 TESPA1A2RU30 521 aaPredicted RBP25.05■■□□□ 1.6
PAF1-207ENST00000598127 TRPA1O75762 1119 aa25.05■■□□□ 1.6
PAF1-207ENST00000598127 GTF2A2P52657 109 aa25.05■■□□□ 1.6
PAF1-207ENST00000598127 TTC6Q86TZ1 520 aa25.05■■□□□ 1.6
PAF1-207ENST00000598127 SDR42E1Q8WUS8 393 aa25.05■■□□□ 1.6
PAF1-207ENST00000598127 DCP1AQ9NPI6 582 aaPredicted RBP25.05■■□□□ 1.6
PAF1-207ENST00000598127 ATP8A2Q9NTI2 1148 aa25.05■■□□□ 1.6
PAF1-207ENST00000598127 BAZ2AQ9UIF9 1905 aaKnown RBP25.04■■□□□ 1.6
PAF1-207ENST00000598127 LBX1P52954 281 aa25.04■■□□□ 1.6
PAF1-207ENST00000598127 CRACR2BQ8N4Y2 399 aaPredicted RBP25.04■■□□□ 1.6
PAF1-207ENST00000598127 OSBP2Q969R2 916 aa25.04■■□□□ 1.6
PAF1-207ENST00000598127 PICK1Q9NRD5 415 aa25.04■■□□□ 1.6
PAF1-207ENST00000598127 ATAD5Q96QE3 1844 aa25.03■■□□□ 1.6
PAF1-207ENST00000598127 IRF6O14896 467 aa25.03■■□□□ 1.6
PAF1-207ENST00000598127 PRKAB2O43741 272 aa25.03■■□□□ 1.6
PAF1-207ENST00000598127 POLR3DP05423 398 aaPredicted RBP25.03■■□□□ 1.6
PAF1-207ENST00000598127 IFNL1Q8IU54 200 aa25.03■■□□□ 1.6
PAF1-207ENST00000598127 STRBPQ96SI9 672 aaKnown RBP25.03■■□□□ 1.6
PAF1-207ENST00000598127 TRIM34Q9BYJ4 488 aa25.03■■□□□ 1.6
PAF1-207ENST00000598127 EHD4Q9H223 541 aa25.03■■□□□ 1.6
PAF1-207ENST00000598127 PRDM10Q9NQV6 1147 aa25.03■■□□□ 1.6
PAF1-207ENST00000598127 MCM9Q9NXL9 1143 aa25.03■■□□□ 1.6
PAF1-207ENST00000598127 PTPRAP18433 802 aa25.02■■□□□ 1.6
PAF1-207ENST00000598127 CAP2P40123 477 aa25.02■■□□□ 1.6
PAF1-207ENST00000598127 SLC4A8Q2Y0W8 1093 aa25.02■■□□□ 1.6
PAF1-207ENST00000598127 TICAM2Q86XR7 235 aa25.02■■□□□ 1.6
PAF1-207ENST00000598127 DNAJC18Q9H819 358 aa25.02■■□□□ 1.6
PAF1-207ENST00000598127 SERPINB13Q9UIV8 391 aa25.02■■□□□ 1.6
PAF1-207ENST00000598127 TSKSQ9UJT2 592 aa25.02■■□□□ 1.6
PAF1-207ENST00000598127 SLC4A4Q9Y6R1 1079 aa25.02■■□□□ 1.6
PAF1-207ENST00000598127 DDX60LQ5H9U9 1706 aaKnown RBP25.02■■□□□ 1.6
PAF1-207ENST00000598127 PHIPQ8WWQ0 1821 aa25.01■■□□□ 1.59
PAF1-207ENST00000598127 ALDH1A1P00352 501 aa25.01■■□□□ 1.59
PAF1-207ENST00000598127 PLCD1P51178 756 aa25.01■■□□□ 1.59
PAF1-207ENST00000598127 SNAPC2Q13487 334 aa25.01■■□□□ 1.59
PAF1-207ENST00000598127 RRP1BQ14684 758 aaKnown RBP25.01■■□□□ 1.59
PAF1-207ENST00000598127 OTUD7BQ6GQQ9 843 aa25.01■■□□□ 1.59
PAF1-207ENST00000598127 CETPP11597 493 aa25■■□□□ 1.59
PAF1-207ENST00000598127 ZMYM1Q5SVZ6 1142 aa25■■□□□ 1.59
PAF1-207ENST00000598127 DDRGK1Q96HY6 314 aa25■■□□□ 1.59
PAF1-207ENST00000598127 PTPN18Q99952 460 aa25■■□□□ 1.59
PAF1-207ENST00000598127 KCNH4Q9UQ05 1017 aa25■■□□□ 1.59
PAF1-207ENST00000598127 ZHX2Q9Y6X8 837 aa25■■□□□ 1.59
PAF1-207ENST00000598127 CASP8AP2Q9UKL3 1982 aa25■■□□□ 1.59
PAF1-207ENST00000598127 CCL15-CCL14A0A0B4J2E2 113 aa24.99■■□□□ 1.59
PAF1-207ENST00000598127 TRIM6-TRIM34B2RNG4 842 aa24.99■■□□□ 1.59
PAF1-207ENST00000598127 IGF2BP3O00425 579 aaKnown RBP eCLIP24.99■■□□□ 1.59
PAF1-207ENST00000598127 CXCL11O14625 94 aa24.99■■□□□ 1.59
PAF1-207ENST00000598127 PDE4AP27815 886 aa24.99■■□□□ 1.59
PAF1-207ENST00000598127 CCL15Q16663 113 aa24.99■■□□□ 1.59
PAF1-207ENST00000598127 BRI3BPQ8WY22 251 aa24.99■■□□□ 1.59
PAF1-207ENST00000598127 GPAA1O43292 621 aa24.98■■□□□ 1.59
PAF1-207ENST00000598127 TATDN1Q6P1N9 297 aa24.98■■□□□ 1.59
PAF1-207ENST00000598127 CFHR5Q9BXR6 569 aa24.98■■□□□ 1.59
PAF1-207ENST00000598127 GINM1Q9NU53 330 aa24.98■■□□□ 1.59
PAF1-207ENST00000598127 AFG3L2Q9Y4W6 797 aa24.98■■□□□ 1.59
PAF1-207ENST00000598127 M0R2C6 588 aa24.97■■□□□ 1.59
PAF1-207ENST00000598127 CENPBP07199 599 aaPredicted RBP24.97■■□□□ 1.59
PAF1-207ENST00000598127 GNAT2P19087 354 aa24.97■■□□□ 1.59
PAF1-207ENST00000598127 GABPAQ06546 454 aa24.97■■□□□ 1.59
PAF1-207ENST00000598127 GIMAP6Q6P9H5 292 aa24.97■■□□□ 1.59
PAF1-207ENST00000598127 SEC62Q99442 399 aaKnown RBP24.97■■□□□ 1.59
PAF1-207ENST00000598127 TAOK2Q9UL54 1235 aa24.97■■□□□ 1.59
PAF1-207ENST00000598127 GSG1L2A8MUP6 293 aa24.96■■□□□ 1.59
PAF1-207ENST00000598127 USP17L12C9JPN9 530 aa24.96■■□□□ 1.59
PAF1-207ENST00000598127 USP17L21D6R901 530 aa24.96■■□□□ 1.59
PAF1-207ENST00000598127 TBC1D8O95759 1140 aa24.96■■□□□ 1.59
PAF1-207ENST00000598127 ASNSP08243 561 aa24.96■■□□□ 1.59
PAF1-207ENST00000598127 AMOTL1Q8IY63 956 aa24.96■■□□□ 1.59
PAF1-207ENST00000598127 RILPL2Q969X0 211 aa24.96■■□□□ 1.59
PAF1-207ENST00000598127 TBC1D2Q9BYX2 928 aa24.96■■□□□ 1.59
PAF1-207ENST00000598127 PTPRFP10586 1907 aa24.96■■□□□ 1.59
PAF1-207ENST00000598127 USP17L5A8MUK1 530 aa24.95■■□□□ 1.58
PAF1-207ENST00000598127 C12orf60Q5U649 245 aa24.95■■□□□ 1.58
PAF1-207ENST00000598127 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.95■■□□□ 1.58
PAF1-207ENST00000598127 MYH8P13535 1937 aa24.94■■□□□ 1.58
PAF1-207ENST00000598127 PATL2C9JE40 543 aaKnown RBP24.94■■□□□ 1.58
PAF1-207ENST00000598127 CYP2D6P10635 497 aa24.94■■□□□ 1.58
PAF1-207ENST00000598127 COL13A1Q5TAT6 717 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms