RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ZKSCAN2Q63HK3 967 aa14.9□□□□□ -0.02
SOX2-OT-228ENST00000597828 FASTKD5Q7L8L6 764 aaKnown RBP14.9□□□□□ -0.02
SOX2-OT-228ENST00000597828 ADGRA1Q86SQ6 560 aa14.9□□□□□ -0.02
SOX2-OT-228ENST00000597828 TEX11Q8IYF3 940 aa14.9□□□□□ -0.02
SOX2-OT-228ENST00000597828 FPGT-TNNI3KV9GXZ4 949 aa14.9□□□□□ -0.02
SOX2-OT-228ENST00000597828 TRIOBPQ9H2D6 2365 aa14.9□□□□□ -0.02
SOX2-OT-228ENST00000597828 RLBP1P12271 317 aa14.89□□□□□ -0.03
SOX2-OT-228ENST00000597828 FCGRTP55899 365 aa14.89□□□□□ -0.03
SOX2-OT-228ENST00000597828 GSTO1P78417 241 aa14.89□□□□□ -0.03
SOX2-OT-228ENST00000597828 TTC39AQ5SRH9 613 aa14.89□□□□□ -0.03
SOX2-OT-228ENST00000597828 GCC1Q96CN9 775 aa14.89□□□□□ -0.03
SOX2-OT-228ENST00000597828 AATFQ9NY61 560 aaKnown RBP eCLIP14.89□□□□□ -0.03
SOX2-OT-228ENST00000597828 TLR7Q9NYK1 1049 aaKnown RBP14.89□□□□□ -0.03
SOX2-OT-228ENST00000597828 LRP2BPQ9P2M1 347 aa14.89□□□□□ -0.03
SOX2-OT-228ENST00000597828 COL11A1P12107 1806 aaPredicted RBP14.89□□□□□ -0.03
SOX2-OT-228ENST00000597828 ZNFX1Q9P2E3 1918 aaKnown RBP14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 TBC1D12O60347 775 aa14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 LDHCP07864 332 aa14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 UQCRFS1P1P0C7P4 283 aa14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 CCL5P13501 91 aa14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 ELNP15502 786 aa14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 HOXD10P28358 340 aa14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 HNRNPUQ00839 825 aaKnown RBP eCLIP14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 OS9Q13438 667 aaPredicted RBP14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 SHROOM1Q2M3G4 852 aaPredicted RBP14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 SMCR8Q8TEV9 937 aaPredicted RBP14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 AGTPBP1Q9UPW5 1226 aa14.88□□□□□ -0.03
SOX2-OT-228ENST00000597828 CYP2E1P05181 493 aaPredicted RBP14.87□□□□□ -0.03
SOX2-OT-228ENST00000597828 SPP2Q13103 211 aa14.87□□□□□ -0.03
SOX2-OT-228ENST00000597828 NAA16Q6N069 864 aaPredicted RBP14.87□□□□□ -0.03
SOX2-OT-228ENST00000597828 MAPKAPK5Q8IW41 473 aa14.87□□□□□ -0.03
SOX2-OT-228ENST00000597828 ANKRD13CQ8N6S4 541 aa14.87□□□□□ -0.03
SOX2-OT-228ENST00000597828 SSH3Q8TE77 659 aa14.87□□□□□ -0.03
SOX2-OT-228ENST00000597828 UNC93B1Q9H1C4 597 aa14.87□□□□□ -0.03
SOX2-OT-228ENST00000597828 DNAJC18Q9H819 358 aa14.87□□□□□ -0.03
SOX2-OT-228ENST00000597828 BIN2Q9UBW5 565 aaPredicted RBP14.87□□□□□ -0.03
SOX2-OT-228ENST00000597828 SLC45A1Q9Y2W3 748 aa14.87□□□□□ -0.03
SOX2-OT-228ENST00000597828 RLFQ13129 1914 aa14.87□□□□□ -0.03
SOX2-OT-228ENST00000597828 H0YGN5 161 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 TNPO2O14787 897 aaKnown RBP14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 SURF6O75683 361 aaKnown RBP14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 CAP2P40123 477 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 ZAP70P43403 619 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 FLT3LGP49771 235 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 HMGCS2P54868 508 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 JAG1P78504 1218 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 ATP8B2P98198 1209 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 ITPRIPQ8IWB1 547 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 RNF208Q9H0X6 261 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 GPR108Q9NPR9 543 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 PIH1D3Q9NQM4 214 aaKnown RBP14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 PCDH10Q9P2E7 1040 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 DBNLQ9UJU6 430 aaKnown RBP14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 COLQQ9Y215 455 aaPredicted RBP14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 NDUFB9Q9Y6M9 179 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 FLT1P17948 1338 aa14.86□□□□□ -0.03
SOX2-OT-228ENST00000597828 ADCY3O60266 1144 aa14.85□□□□□ -0.03
SOX2-OT-228ENST00000597828 DYNLL1P63167 89 aaKnown RBP14.85□□□□□ -0.03
SOX2-OT-228ENST00000597828 DIEXFQ68CQ4 756 aaKnown RBP14.85□□□□□ -0.03
SOX2-OT-228ENST00000597828 FTSJ3Q8IY81 847 aaKnown RBP14.85□□□□□ -0.03
SOX2-OT-228ENST00000597828 ZNF280CQ8ND82 737 aa14.85□□□□□ -0.03
SOX2-OT-228ENST00000597828 SLAIN1Q8ND83 568 aa14.85□□□□□ -0.03
SOX2-OT-228ENST00000597828 TGFBRAP1Q8WUH2 860 aa14.85□□□□□ -0.03
SOX2-OT-228ENST00000597828 CCDC8Q9H0W5 538 aaPredicted RBP14.85□□□□□ -0.03
SOX2-OT-228ENST00000597828 TAOK2Q9UL54 1235 aa14.85□□□□□ -0.03
SOX2-OT-228ENST00000597828 A0A0G2JMZ2 1700 aa14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 PEX10O60683 326 aa14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 GDF11O95390 407 aa14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 MAP4K4O95819 1239 aaPredicted RBP14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 INHAP05111 366 aa14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 GJB1P08034 283 aa14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 GJA8P48165 433 aa14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 UBXN2AP68543 259 aa14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 CCDC158Q5M9N0 1113 aa14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 MIER1Q8N108 512 aa14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 PROCA1Q8NCQ7 364 aaPredicted RBP14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 NOL10Q9BSC4 688 aaKnown RBP14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 SAP30BPQ9UHR5 308 aaKnown RBP14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 PLXNA1Q9UIW2 1896 aa14.84□□□□□ -0.03
SOX2-OT-228ENST00000597828 SZT2Q5T011 3432 aa14.83□□□□□ -0.03
SOX2-OT-228ENST00000597828 ZBTB7BO15156 539 aaPredicted RBP14.83□□□□□ -0.04
SOX2-OT-228ENST00000597828 FXR1P51114 621 aaKnown RBP eCLIP14.83□□□□□ -0.04
SOX2-OT-228ENST00000597828 MTMR2Q13614 643 aa14.83□□□□□ -0.04
SOX2-OT-228ENST00000597828 FAM110CQ1W6H9 321 aa14.83□□□□□ -0.04
SOX2-OT-228ENST00000597828 UBE2Q1Q7Z7E8 422 aa14.83□□□□□ -0.04
SOX2-OT-228ENST00000597828 U2AF1L4Q8WU68 220 aaKnown RBP14.83□□□□□ -0.04
SOX2-OT-228ENST00000597828 EAF2Q96CJ1 260 aaPredicted RBP14.83□□□□□ -0.04
SOX2-OT-228ENST00000597828 ASCC2Q9H1I8 757 aaPredicted RBP14.83□□□□□ -0.04
SOX2-OT-228ENST00000597828 HERC5Q9UII4 1024 aaKnown RBP14.83□□□□□ -0.04
SOX2-OT-228ENST00000597828 PNMA3Q9UL41 463 aa14.83□□□□□ -0.04
SOX2-OT-228ENST00000597828 PALD1Q9ULE6 856 aa14.83□□□□□ -0.04
SOX2-OT-228ENST00000597828 USP17L5A8MUK1 530 aa14.82□□□□□ -0.04
SOX2-OT-228ENST00000597828 PPP4CP60510 307 aa14.82□□□□□ -0.04
SOX2-OT-228ENST00000597828 PI4KBQ9UBF8 816 aa14.82□□□□□ -0.04
SOX2-OT-228ENST00000597828 NOP58Q9Y2X3 529 aaKnown RBP14.82□□□□□ -0.04
SOX2-OT-228ENST00000597828 FARP2O94887 1054 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 BAG3O95817 575 aa14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 IRF5Q13568 498 aa14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 SH3D19Q5HYK7 790 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms