RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 TRIM17Q9Y577 477 aa18.72■□□□□ 0.59
XRCC1-206ENST00000597811 COL2A1P02458 1487 aaPredicted RBP18.71■□□□□ 0.59
XRCC1-206ENST00000597811 MAP4K4O95819 1239 aaPredicted RBP18.71■□□□□ 0.59
XRCC1-206ENST00000597811 SOX10P56693 466 aa18.71■□□□□ 0.59
XRCC1-206ENST00000597811 SP3Q02447 781 aa18.71■□□□□ 0.59
XRCC1-206ENST00000597811 SCYL3Q8IZE3 742 aa18.71■□□□□ 0.59
XRCC1-206ENST00000597811 SH3RF3Q8TEJ3 882 aaPredicted RBP18.71■□□□□ 0.59
XRCC1-206ENST00000597811 ERO1AQ96HE7 468 aa18.71■□□□□ 0.59
XRCC1-206ENST00000597811 PAG1Q9NWQ8 432 aa18.71■□□□□ 0.59
XRCC1-206ENST00000597811 MYH1P12882 1939 aa18.7■□□□□ 0.58
XRCC1-206ENST00000597811 TSHZ3Q63HK5 1081 aa18.7■□□□□ 0.58
XRCC1-206ENST00000597811 TEX11Q8IYF3 940 aa18.7■□□□□ 0.58
XRCC1-206ENST00000597811 EDC3Q96F86 508 aaKnown RBP18.7■□□□□ 0.58
XRCC1-206ENST00000597811 OSBPL5Q9H0X9 879 aaPredicted RBP18.7■□□□□ 0.58
XRCC1-206ENST00000597811 ZCCHC17Q9NP64 241 aaKnown RBP18.7■□□□□ 0.58
XRCC1-206ENST00000597811 PDE4DIPQ5VU43 2346 aa18.69■□□□□ 0.58
XRCC1-206ENST00000597811 FAM196BA6NMK8 535 aa18.69■□□□□ 0.58
XRCC1-206ENST00000597811 IGHDP01880 384 aa18.69■□□□□ 0.58
XRCC1-206ENST00000597811 PLCG2P16885 1265 aa18.69■□□□□ 0.58
XRCC1-206ENST00000597811 MLLT1Q03111 559 aaPredicted RBP18.69■□□□□ 0.58
XRCC1-206ENST00000597811 MOGSQ13724 837 aa18.69■□□□□ 0.58
XRCC1-206ENST00000597811 MIGA1Q8NAN2 632 aa18.69■□□□□ 0.58
XRCC1-206ENST00000597811 HAUS7Q99871 368 aa18.69■□□□□ 0.58
XRCC1-206ENST00000597811 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.69■□□□□ 0.58
XRCC1-206ENST00000597811 MKI67P46013 3256 aaKnown RBP18.68■□□□□ 0.58
XRCC1-206ENST00000597811 ERC2O15083 957 aa18.68■□□□□ 0.58
XRCC1-206ENST00000597811 IGSF3O75054 1194 aa18.68■□□□□ 0.58
XRCC1-206ENST00000597811 PTPRAP18433 802 aa18.68■□□□□ 0.58
XRCC1-206ENST00000597811 SLC9C2Q5TAH2 1124 aa18.68■□□□□ 0.58
XRCC1-206ENST00000597811 PICK1Q9NRD5 415 aa18.68■□□□□ 0.58
XRCC1-206ENST00000597811 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.68■□□□□ 0.58
XRCC1-206ENST00000597811 KIAA0100Q14667 2235 aaKnown RBP18.68■□□□□ 0.58
XRCC1-206ENST00000597811 TBC1D12O60347 775 aa18.67■□□□□ 0.58
XRCC1-206ENST00000597811 TLR2O60603 784 aa18.67■□□□□ 0.58
XRCC1-206ENST00000597811 PPP4CP60510 307 aa18.67■□□□□ 0.58
XRCC1-206ENST00000597811 ANKRD23Q86SG2 305 aa18.67■□□□□ 0.58
XRCC1-206ENST00000597811 EFCC1Q9HA90 598 aa18.67■□□□□ 0.58
XRCC1-206ENST00000597811 ZHX2Q9Y6X8 837 aa18.67■□□□□ 0.58
XRCC1-206ENST00000597811 MGAMO43451 1857 aa18.67■□□□□ 0.58
XRCC1-206ENST00000597811 PDHXO00330 501 aa18.66■□□□□ 0.58
XRCC1-206ENST00000597811 CXCL11O14625 94 aa18.66■□□□□ 0.58
XRCC1-206ENST00000597811 CTNND1O60716 968 aaKnown RBP18.66■□□□□ 0.58
XRCC1-206ENST00000597811 MX1P20591 662 aa18.66■□□□□ 0.58
XRCC1-206ENST00000597811 DYNLL1P63167 89 aaKnown RBP18.66■□□□□ 0.58
XRCC1-206ENST00000597811 OTUD7AQ8TE49 926 aaPredicted RBP18.66■□□□□ 0.58
XRCC1-206ENST00000597811 LNPKQ9C0E8 428 aa18.66■□□□□ 0.58
XRCC1-206ENST00000597811 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.66■□□□□ 0.58
XRCC1-206ENST00000597811 PTPN22Q9Y2R2 807 aa18.66■□□□□ 0.58
XRCC1-206ENST00000597811 AFG3L2Q9Y4W6 797 aa18.66■□□□□ 0.58
XRCC1-206ENST00000597811 TTC41PQ6P2S7 1318 aa18.66■□□□□ 0.58
XRCC1-206ENST00000597811 LOC285556D6RIA3 1793 aa18.65■□□□□ 0.58
XRCC1-206ENST00000597811 PDE6AP16499 860 aa18.65■□□□□ 0.58
XRCC1-206ENST00000597811 USP5P45974 858 aa18.65■□□□□ 0.58
XRCC1-206ENST00000597811 ZSCAN25Q6NSZ9 544 aa18.65■□□□□ 0.58
XRCC1-206ENST00000597811 CCDC84Q86UT8 332 aaPredicted RBP18.65■□□□□ 0.58
XRCC1-206ENST00000597811 MAPKAPK5Q8IW41 473 aa18.65■□□□□ 0.58
XRCC1-206ENST00000597811 TGFBRAP1Q8WUH2 860 aa18.65■□□□□ 0.58
XRCC1-206ENST00000597811 FLT1P17948 1338 aa18.65■□□□□ 0.58
XRCC1-206ENST00000597811 ZNF532Q9HCE3 1301 aa18.65■□□□□ 0.58
XRCC1-206ENST00000597811 RBBP6Q7Z6E9 1792 aaKnown RBP18.65■□□□□ 0.58
XRCC1-206ENST00000597811 MYH7P12883 1935 aa18.64■□□□□ 0.58
XRCC1-206ENST00000597811 A0A0G2JLL6 359 aaPredicted RBP18.64■□□□□ 0.57
XRCC1-206ENST00000597811 MAGEB6P1A0A0J9YX57 407 aa18.64■□□□□ 0.57
XRCC1-206ENST00000597811 RRP1BQ14684 758 aaKnown RBP18.64■□□□□ 0.57
XRCC1-206ENST00000597811 GPAT2Q6NUI2 795 aa18.64■□□□□ 0.57
XRCC1-206ENST00000597811 TMED8Q6PL24 325 aaPredicted RBP18.64■□□□□ 0.57
XRCC1-206ENST00000597811 PRRT2Q7Z6L0 340 aaPredicted RBP18.64■□□□□ 0.57
XRCC1-206ENST00000597811 CERS3Q8IU89 383 aa18.64■□□□□ 0.57
XRCC1-206ENST00000597811 SMC5Q8IY18 1101 aa18.64■□□□□ 0.57
XRCC1-206ENST00000597811 ARHGAP39Q9C0H5 1083 aa18.64■□□□□ 0.57
XRCC1-206ENST00000597811 ADGRA2Q96PE1 1338 aa18.64■□□□□ 0.57
XRCC1-206ENST00000597811 DDX60LQ5H9U9 1706 aaKnown RBP18.63■□□□□ 0.57
XRCC1-206ENST00000597811 NAV1Q8NEY1 1877 aa18.63■□□□□ 0.57
XRCC1-206ENST00000597811 GLRX3O76003 335 aaKnown RBP18.63■□□□□ 0.57
XRCC1-206ENST00000597811 CENPBP07199 599 aaPredicted RBP18.63■□□□□ 0.57
XRCC1-206ENST00000597811 C17orf99Q6UX52 265 aa18.63■□□□□ 0.57
XRCC1-206ENST00000597811 PI4KBQ9UBF8 816 aa18.63■□□□□ 0.57
XRCC1-206ENST00000597811 CPA4Q9UI42 421 aa18.63■□□□□ 0.57
XRCC1-206ENST00000597811 TRIM75PA6NK02 468 aa18.62■□□□□ 0.57
XRCC1-206ENST00000597811 LACTBP83111 547 aaPredicted RBP18.62■□□□□ 0.57
XRCC1-206ENST00000597811 CHD1LQ86WJ1 897 aa18.62■□□□□ 0.57
XRCC1-206ENST00000597811 TRIM34Q9BYJ4 488 aa18.62■□□□□ 0.57
XRCC1-206ENST00000597811 DHX36Q9H2U1 1008 aaKnown RBP18.62■□□□□ 0.57
XRCC1-206ENST00000597811 HERC5Q9UII4 1024 aaKnown RBP18.62■□□□□ 0.57
XRCC1-206ENST00000597811 NEFLP07196 543 aa18.61■□□□□ 0.57
XRCC1-206ENST00000597811 CYP2C8P10632 490 aa18.61■□□□□ 0.57
XRCC1-206ENST00000597811 ADD2P35612 726 aa18.61■□□□□ 0.57
XRCC1-206ENST00000597811 CAP2P40123 477 aa18.61■□□□□ 0.57
XRCC1-206ENST00000597811 SLC4A8Q2Y0W8 1093 aa18.61■□□□□ 0.57
XRCC1-206ENST00000597811 GADL1Q6ZQY3 521 aa18.61■□□□□ 0.57
XRCC1-206ENST00000597811 FASTKD5Q7L8L6 764 aaKnown RBP18.61■□□□□ 0.57
XRCC1-206ENST00000597811 DNAJC18Q9H819 358 aa18.61■□□□□ 0.57
XRCC1-206ENST00000597811 SAP30BPQ9UHR5 308 aaKnown RBP18.61■□□□□ 0.57
XRCC1-206ENST00000597811 PALD1Q9ULE6 856 aa18.61■□□□□ 0.57
XRCC1-206ENST00000597811 ECM2O94769 699 aaPredicted RBP18.6■□□□□ 0.57
XRCC1-206ENST00000597811 CTGFP29279 349 aa18.6■□□□□ 0.57
XRCC1-206ENST00000597811 NUCB1Q02818 461 aa18.6■□□□□ 0.57
XRCC1-206ENST00000597811 ARHGEF6Q15052 776 aa18.6■□□□□ 0.57
XRCC1-206ENST00000597811 LRRFIP1Q32MZ4 808 aaKnown RBP18.6■□□□□ 0.57
XRCC1-206ENST00000597811 KBTBD3Q8NAB2 608 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms