RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 PPIL2Q13356 520 aa20.22■□□□□ 0.83
SSBP4-204ENST00000597724 METTL16Q86W50 562 aaKnown RBP20.22■□□□□ 0.83
SSBP4-204ENST00000597724 FOXP4Q8IVH2 680 aaPredicted RBP20.22■□□□□ 0.83
SSBP4-204ENST00000597724 SCYL3Q8IZE3 742 aa20.22■□□□□ 0.83
SSBP4-204ENST00000597724 CRNKL1Q9BZJ0 848 aaKnown RBP20.22■□□□□ 0.83
SSBP4-204ENST00000597724 STAP2Q9UGK3 403 aa20.22■□□□□ 0.83
SSBP4-204ENST00000597724 SAP30BPQ9UHR5 308 aaKnown RBP20.22■□□□□ 0.83
SSBP4-204ENST00000597724 IGF2BP3O00425 579 aaKnown RBP eCLIP20.21■□□□□ 0.83
SSBP4-204ENST00000597724 IRF6O14896 467 aa20.21■□□□□ 0.83
SSBP4-204ENST00000597724 ALDH1A1P00352 501 aa20.21■□□□□ 0.83
SSBP4-204ENST00000597724 B4GALNT3Q6L9W6 998 aa20.21■□□□□ 0.83
SSBP4-204ENST00000597724 PTPN18Q99952 460 aa20.21■□□□□ 0.83
SSBP4-204ENST00000597724 CFHR5Q9BXR6 569 aa20.21■□□□□ 0.83
SSBP4-204ENST00000597724 SIPA1L1O43166 1804 aa20.2■□□□□ 0.82
SSBP4-204ENST00000597724 MYH1P12882 1939 aa20.2■□□□□ 0.82
SSBP4-204ENST00000597724 CCL15-CCL14A0A0B4J2E2 113 aa20.2■□□□□ 0.82
SSBP4-204ENST00000597724 CCL15Q16663 113 aa20.2■□□□□ 0.82
SSBP4-204ENST00000597724 LCORLQ8N3X6 602 aa20.2■□□□□ 0.82
SSBP4-204ENST00000597724 BRI3BPQ8WY22 251 aa20.2■□□□□ 0.82
SSBP4-204ENST00000597724 ARMT1Q9H993 441 aa20.2■□□□□ 0.82
SSBP4-204ENST00000597724 MBD4O95243 580 aa20.19■□□□□ 0.82
SSBP4-204ENST00000597724 TBC1D8O95759 1140 aa20.19■□□□□ 0.82
SSBP4-204ENST00000597724 HLA-DOAP06340 250 aa20.19■□□□□ 0.82
SSBP4-204ENST00000597724 PTPRAP18433 802 aa20.19■□□□□ 0.82
SSBP4-204ENST00000597724 PDE1AP54750 535 aa20.19■□□□□ 0.82
SSBP4-204ENST00000597724 NUCB1Q02818 461 aa20.19■□□□□ 0.82
SSBP4-204ENST00000597724 SNAPC2Q13487 334 aa20.19■□□□□ 0.82
SSBP4-204ENST00000597724 LNPKQ9C0E8 428 aa20.19■□□□□ 0.82
SSBP4-204ENST00000597724 PICK1Q9NRD5 415 aa20.19■□□□□ 0.82
SSBP4-204ENST00000597724 KCNH4Q9UQ05 1017 aa20.19■□□□□ 0.82
SSBP4-204ENST00000597724 CASP8AP2Q9UKL3 1982 aa20.18■□□□□ 0.82
SSBP4-204ENST00000597724 CETPP11597 493 aa20.18■□□□□ 0.82
SSBP4-204ENST00000597724 CAP2P40123 477 aa20.18■□□□□ 0.82
SSBP4-204ENST00000597724 RRP1BQ14684 758 aaKnown RBP20.18■□□□□ 0.82
SSBP4-204ENST00000597724 SLC4A8Q2Y0W8 1093 aa20.18■□□□□ 0.82
SSBP4-204ENST00000597724 OTUD7BQ6GQQ9 843 aa20.18■□□□□ 0.82
SSBP4-204ENST00000597724 CHD1LQ86WJ1 897 aa20.18■□□□□ 0.82
SSBP4-204ENST00000597724 CRACR2BQ8N4Y2 399 aaPredicted RBP20.18■□□□□ 0.82
SSBP4-204ENST00000597724 PUS7LQ9H0K6 701 aaKnown RBP20.18■□□□□ 0.82
SSBP4-204ENST00000597724 DNAJC18Q9H819 358 aa20.18■□□□□ 0.82
SSBP4-204ENST00000597724 ZHX2Q9Y6X8 837 aa20.18■□□□□ 0.82
SSBP4-204ENST00000597724 RNF113AO15541 343 aaKnown RBP20.17■□□□□ 0.82
SSBP4-204ENST00000597724 TTC6Q86TZ1 520 aa20.17■□□□□ 0.82
SSBP4-204ENST00000597724 SDR42E1Q8WUS8 393 aa20.17■□□□□ 0.82
SSBP4-204ENST00000597724 R3HDMLQ9H3Y0 253 aa20.17■□□□□ 0.82
SSBP4-204ENST00000597724 DCP1AQ9NPI6 582 aaPredicted RBP20.17■□□□□ 0.82
SSBP4-204ENST00000597724 DOCK1Q14185 1865 aa20.17■□□□□ 0.82
SSBP4-204ENST00000597724 CXCL11O14625 94 aa20.16■□□□□ 0.82
SSBP4-204ENST00000597724 PRKAB2O43741 272 aa20.16■□□□□ 0.82
SSBP4-204ENST00000597724 ZFYP08048 801 aaPredicted RBP20.16■□□□□ 0.82
SSBP4-204ENST00000597724 NOM1Q5C9Z4 860 aaKnown RBP20.16■□□□□ 0.82
SSBP4-204ENST00000597724 TRIM34Q9BYJ4 488 aa20.16■□□□□ 0.82
SSBP4-204ENST00000597724 EHD4Q9H223 541 aa20.16■□□□□ 0.82
SSBP4-204ENST00000597724 AFG3L2Q9Y4W6 797 aa20.16■□□□□ 0.82
SSBP4-204ENST00000597724 DDX60LQ5H9U9 1706 aaKnown RBP20.16■□□□□ 0.82
SSBP4-204ENST00000597724 PLCD1P51178 756 aa20.15■□□□□ 0.82
SSBP4-204ENST00000597724 LRRFIP1Q32MZ4 808 aaKnown RBP20.15■□□□□ 0.82
SSBP4-204ENST00000597724 TNS4Q8IZW8 715 aa20.15■□□□□ 0.82
SSBP4-204ENST00000597724 FAM43AQ8N2R8 423 aa20.15■□□□□ 0.82
SSBP4-204ENST00000597724 APPBP2Q92624 585 aa20.15■□□□□ 0.82
SSBP4-204ENST00000597724 OSBP2Q969R2 916 aa20.15■□□□□ 0.82
SSBP4-204ENST00000597724 ATP8A2Q9NTI2 1148 aa20.15■□□□□ 0.82
SSBP4-204ENST00000597724 MCM9Q9NXL9 1143 aa20.15■□□□□ 0.82
SSBP4-204ENST00000597724 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.15■□□□□ 0.82
SSBP4-204ENST00000597724 SERPINB13Q9UIV8 391 aa20.15■□□□□ 0.82
SSBP4-204ENST00000597724 NAV1Q8NEY1 1877 aa20.14■□□□□ 0.81
SSBP4-204ENST00000597724 BTBD19C9JJ37 291 aa20.14■□□□□ 0.81
SSBP4-204ENST00000597724 GPR25O00155 361 aa20.14■□□□□ 0.81
SSBP4-204ENST00000597724 POLR3DP05423 398 aaPredicted RBP20.14■□□□□ 0.81
SSBP4-204ENST00000597724 MOGSQ13724 837 aa20.14■□□□□ 0.81
SSBP4-204ENST00000597724 CCDC84Q86UT8 332 aaPredicted RBP20.14■□□□□ 0.81
SSBP4-204ENST00000597724 PHIPQ8WWQ0 1821 aa20.13■□□□□ 0.81
SSBP4-204ENST00000597724 JAG1P78504 1218 aa20.13■□□□□ 0.81
SSBP4-204ENST00000597724 CRHR2Q13324 411 aa20.13■□□□□ 0.81
SSBP4-204ENST00000597724 TATDN1Q6P1N9 297 aa20.13■□□□□ 0.81
SSBP4-204ENST00000597724 PLEKHM2Q8IWE5 1019 aa20.13■□□□□ 0.81
SSBP4-204ENST00000597724 STRBPQ96SI9 672 aaKnown RBP20.13■□□□□ 0.81
SSBP4-204ENST00000597724 FSD1Q9BTV5 496 aa20.13■□□□□ 0.81
SSBP4-204ENST00000597724 ZCCHC17Q9NP64 241 aaKnown RBP20.13■□□□□ 0.81
SSBP4-204ENST00000597724 SLC4A4Q9Y6R1 1079 aa20.13■□□□□ 0.81
SSBP4-204ENST00000597724 ATAD5Q96QE3 1844 aa20.13■□□□□ 0.81
SSBP4-204ENST00000597724 A0A0G2JLL6 359 aaPredicted RBP20.12■□□□□ 0.81
SSBP4-204ENST00000597724 PRRT2Q7Z6L0 340 aaPredicted RBP20.12■□□□□ 0.81
SSBP4-204ENST00000597724 ANKRD23Q86SG2 305 aa20.12■□□□□ 0.81
SSBP4-204ENST00000597724 ZNF296Q8WUU4 475 aaPredicted RBP20.12■□□□□ 0.81
SSBP4-204ENST00000597724 EVI5LQ96CN4 794 aa20.12■□□□□ 0.81
SSBP4-204ENST00000597724 OSBPL3Q9H4L5 887 aa20.12■□□□□ 0.81
SSBP4-204ENST00000597724 GINM1Q9NU53 330 aa20.12■□□□□ 0.81
SSBP4-204ENST00000597724 USP17L5A8MUK1 530 aa20.11■□□□□ 0.81
SSBP4-204ENST00000597724 ASNSP08243 561 aa20.11■□□□□ 0.81
SSBP4-204ENST00000597724 EVX2Q03828 476 aa20.11■□□□□ 0.81
SSBP4-204ENST00000597724 GABPAQ06546 454 aa20.11■□□□□ 0.81
SSBP4-204ENST00000597724 TAF1CQ15572 869 aaPredicted RBP20.11■□□□□ 0.81
SSBP4-204ENST00000597724 TBC1D2Q9BYX2 928 aa20.11■□□□□ 0.81
SSBP4-204ENST00000597724 TRIM75PA6NK02 468 aa20.1■□□□□ 0.81
SSBP4-204ENST00000597724 M0R2C6 588 aa20.1■□□□□ 0.81
SSBP4-204ENST00000597724 GDF11O95390 407 aa20.1■□□□□ 0.81
SSBP4-204ENST00000597724 SHROOM1Q2M3G4 852 aaPredicted RBP20.1■□□□□ 0.81
SSBP4-204ENST00000597724 ZMYM1Q5SVZ6 1142 aa20.1■□□□□ 0.81
SSBP4-204ENST00000597724 GPAT2Q6NUI2 795 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms