RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 FSD1Q9BTV5 496 aa21.98■■□□□ 1.11
ZNF558-204ENST00000596172 SAP30BPQ9UHR5 308 aaKnown RBP21.98■■□□□ 1.11
ZNF558-204ENST00000596172 MKRN3Q13064 507 aaKnown RBP21.97■■□□□ 1.11
ZNF558-204ENST00000596172 SCYL3Q8IZE3 742 aa21.97■■□□□ 1.11
ZNF558-204ENST00000596172 STRBPQ96SI9 672 aaKnown RBP21.97■■□□□ 1.11
ZNF558-204ENST00000596172 EHD4Q9H223 541 aa21.97■■□□□ 1.11
ZNF558-204ENST00000596172 DCP1AQ9NPI6 582 aaPredicted RBP21.97■■□□□ 1.11
ZNF558-204ENST00000596172 SAGE1Q9NXZ1 904 aa21.97■■□□□ 1.11
ZNF558-204ENST00000596172 TAOK2Q9UL54 1235 aa21.97■■□□□ 1.11
ZNF558-204ENST00000596172 TESPA1A2RU30 521 aaPredicted RBP21.96■■□□□ 1.11
ZNF558-204ENST00000596172 FOXN1O15353 648 aa21.96■■□□□ 1.11
ZNF558-204ENST00000596172 SLURP2P0DP57 97 aa21.96■■□□□ 1.11
ZNF558-204ENST00000596172 CTCFP49711 727 aaPredicted RBP21.96■■□□□ 1.11
ZNF558-204ENST00000596172 PPIL2Q13356 520 aa21.96■■□□□ 1.11
ZNF558-204ENST00000596172 CNKSR2Q8WXI2 1034 aa21.96■■□□□ 1.11
ZNF558-204ENST00000596172 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.96■■□□□ 1.11
ZNF558-204ENST00000596172 AK9Q5TCS8 1911 aa21.96■■□□□ 1.11
ZNF558-204ENST00000596172 FOCADQ5VW36 1801 aa21.95■■□□□ 1.1
ZNF558-204ENST00000596172 GTF2A2P52657 109 aa21.95■■□□□ 1.1
ZNF558-204ENST00000596172 ZMYM1Q5SVZ6 1142 aa21.95■■□□□ 1.1
ZNF558-204ENST00000596172 SDR42E1Q8WUS8 393 aa21.95■■□□□ 1.1
ZNF558-204ENST00000596172 OTUD5Q96G74 571 aa21.95■■□□□ 1.1
ZNF558-204ENST00000596172 MS4A4AQ96JQ5 239 aa21.95■■□□□ 1.1
ZNF558-204ENST00000596172 OTOFQ9HC10 1997 aa21.95■■□□□ 1.1
ZNF558-204ENST00000596172 PRKAB2O43741 272 aa21.94■■□□□ 1.1
ZNF558-204ENST00000596172 PDE4AP27815 886 aa21.94■■□□□ 1.1
ZNF558-204ENST00000596172 GIMAP6Q6P9H5 292 aa21.94■■□□□ 1.1
ZNF558-204ENST00000596172 CRACR2BQ8N4Y2 399 aaPredicted RBP21.94■■□□□ 1.1
ZNF558-204ENST00000596172 DNAJC18Q9H819 358 aa21.94■■□□□ 1.1
ZNF558-204ENST00000596172 PICK1Q9NRD5 415 aa21.94■■□□□ 1.1
ZNF558-204ENST00000596172 RNF186Q9NXI6 227 aa21.94■■□□□ 1.1
ZNF558-204ENST00000596172 MCM9Q9NXL9 1143 aa21.94■■□□□ 1.1
ZNF558-204ENST00000596172 SERPINB13Q9UIV8 391 aa21.94■■□□□ 1.1
ZNF558-204ENST00000596172 SLC4A4Q9Y6R1 1079 aa21.94■■□□□ 1.1
ZNF558-204ENST00000596172 FAM196BA6NMK8 535 aa21.93■■□□□ 1.1
ZNF558-204ENST00000596172 IRF6O14896 467 aa21.93■■□□□ 1.1
ZNF558-204ENST00000596172 POLR3DP05423 398 aaPredicted RBP21.93■■□□□ 1.1
ZNF558-204ENST00000596172 PTPRAP18433 802 aa21.93■■□□□ 1.1
ZNF558-204ENST00000596172 GNAT2P19087 354 aa21.93■■□□□ 1.1
ZNF558-204ENST00000596172 CAP2P40123 477 aa21.93■■□□□ 1.1
ZNF558-204ENST00000596172 DDRGK1Q96HY6 314 aa21.93■■□□□ 1.1
ZNF558-204ENST00000596172 CDK5RAP2Q96SN8 1893 aa21.93■■□□□ 1.1
ZNF558-204ENST00000596172 TRIM34Q9BYJ4 488 aa21.93■■□□□ 1.1
ZNF558-204ENST00000596172 GINM1Q9NU53 330 aa21.93■■□□□ 1.1
ZNF558-204ENST00000596172 KCNH4Q9UQ05 1017 aa21.93■■□□□ 1.1
ZNF558-204ENST00000596172 ALDH1A1P00352 501 aa21.92■■□□□ 1.1
ZNF558-204ENST00000596172 NEFLP07196 543 aa21.92■■□□□ 1.1
ZNF558-204ENST00000596172 PLCD1P51178 756 aa21.92■■□□□ 1.1
ZNF558-204ENST00000596172 SNAPC2Q13487 334 aa21.92■■□□□ 1.1
ZNF558-204ENST00000596172 TATDN1Q6P1N9 297 aa21.92■■□□□ 1.1
ZNF558-204ENST00000596172 CENPQQ7L2Z9 268 aaPredicted RBP21.92■■□□□ 1.1
ZNF558-204ENST00000596172 IFNL1Q8IU54 200 aa21.92■■□□□ 1.1
ZNF558-204ENST00000596172 MYH7P12883 1935 aa21.92■■□□□ 1.1
ZNF558-204ENST00000596172 TRIM6-TRIM34B2RNG4 842 aa21.91■■□□□ 1.1
ZNF558-204ENST00000596172 M0R2C6 588 aa21.91■■□□□ 1.1
ZNF558-204ENST00000596172 CXCL11O14625 94 aa21.91■■□□□ 1.1
ZNF558-204ENST00000596172 GPAA1O43292 621 aa21.91■■□□□ 1.1
ZNF558-204ENST00000596172 HSPA8P11142 646 aaKnown RBP21.91■■□□□ 1.1
ZNF558-204ENST00000596172 CETPP11597 493 aa21.91■■□□□ 1.1
ZNF558-204ENST00000596172 GABPAQ06546 454 aa21.91■■□□□ 1.1
ZNF558-204ENST00000596172 RRP1BQ14684 758 aaKnown RBP21.91■■□□□ 1.1
ZNF558-204ENST00000596172 OTUD7BQ6GQQ9 843 aa21.91■■□□□ 1.1
ZNF558-204ENST00000596172 CFHR5Q9BXR6 569 aa21.91■■□□□ 1.1
ZNF558-204ENST00000596172 TBC1D2Q9BYX2 928 aa21.91■■□□□ 1.1
ZNF558-204ENST00000596172 GSG1L2A8MUP6 293 aa21.9■■□□□ 1.1
ZNF558-204ENST00000596172 TRPA1O75762 1119 aa21.9■■□□□ 1.1
ZNF558-204ENST00000596172 BRI3BPQ8WY22 251 aa21.9■■□□□ 1.1
ZNF558-204ENST00000596172 PRDM10Q9NQV6 1147 aa21.9■■□□□ 1.1
ZNF558-204ENST00000596172 HELLSQ9NRZ9 838 aa21.9■■□□□ 1.1
ZNF558-204ENST00000596172 AFG3L2Q9Y4W6 797 aa21.9■■□□□ 1.1
ZNF558-204ENST00000596172 ZHX2Q9Y6X8 837 aa21.9■■□□□ 1.1
ZNF558-204ENST00000596172 CCL15-CCL14A0A0B4J2E2 113 aa21.89■■□□□ 1.09
ZNF558-204ENST00000596172 PATL2C9JE40 543 aaKnown RBP21.89■■□□□ 1.09
ZNF558-204ENST00000596172 CCL15Q16663 113 aa21.89■■□□□ 1.09
ZNF558-204ENST00000596172 C12orf60Q5U649 245 aa21.89■■□□□ 1.09
ZNF558-204ENST00000596172 AMOTL1Q8IY63 956 aa21.89■■□□□ 1.09
ZNF558-204ENST00000596172 RILPL2Q969X0 211 aa21.89■■□□□ 1.09
ZNF558-204ENST00000596172 SEC62Q99442 399 aaKnown RBP21.89■■□□□ 1.09
ZNF558-204ENST00000596172 PTPN18Q99952 460 aa21.89■■□□□ 1.09
ZNF558-204ENST00000596172 SIPA1L1O43166 1804 aa21.88■■□□□ 1.09
ZNF558-204ENST00000596172 USP17L12C9JPN9 530 aa21.88■■□□□ 1.09
ZNF558-204ENST00000596172 USP17L21D6R901 530 aa21.88■■□□□ 1.09
ZNF558-204ENST00000596172 IGF2BP3O00425 579 aaKnown RBP eCLIP21.88■■□□□ 1.09
ZNF558-204ENST00000596172 ASNSP08243 561 aa21.88■■□□□ 1.09
ZNF558-204ENST00000596172 SLC4A8Q2Y0W8 1093 aa21.88■■□□□ 1.09
ZNF558-204ENST00000596172 SBK1Q52WX2 424 aa21.88■■□□□ 1.09
ZNF558-204ENST00000596172 CTR9Q6PD62 1173 aa21.88■■□□□ 1.09
ZNF558-204ENST00000596172 ZCCHC17Q9NP64 241 aaKnown RBP21.88■■□□□ 1.09
ZNF558-204ENST00000596172 LAMB1P07942 1786 aa21.88■■□□□ 1.09
ZNF558-204ENST00000596172 DDX60LQ5H9U9 1706 aaKnown RBP21.87■■□□□ 1.09
ZNF558-204ENST00000596172 USP17L5A8MUK1 530 aa21.87■■□□□ 1.09
ZNF558-204ENST00000596172 SHMT1P34896 483 aa21.87■■□□□ 1.09
ZNF558-204ENST00000596172 LBX1P52954 281 aa21.87■■□□□ 1.09
ZNF558-204ENST00000596172 ERICH6BQ5W0A0 696 aa21.87■■□□□ 1.09
ZNF558-204ENST00000596172 ARPP21Q9UBL0 812 aaPredicted RBP21.87■■□□□ 1.09
ZNF558-204ENST00000596172 SWAP70Q9UH65 585 aa21.87■■□□□ 1.09
ZNF558-204ENST00000596172 MYH1P12882 1939 aa21.86■■□□□ 1.09
ZNF558-204ENST00000596172 CYP2D6P10635 497 aa21.86■■□□□ 1.09
ZNF558-204ENST00000596172 SDSP20132 328 aa21.86■■□□□ 1.09
ZNF558-204ENST00000596172 MCMDC2Q4G0Z9 681 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms