RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 PPP4CP60510 307 aa21.9■■□□□ 1.1
HOMER3-208ENST00000595756 PDE3AQ14432 1141 aa21.9■■□□□ 1.1
HOMER3-208ENST00000595756 TRIM47Q96LD4 638 aa21.9■■□□□ 1.1
HOMER3-208ENST00000595756 TBC1D2Q9BYX2 928 aa21.9■■□□□ 1.1
HOMER3-208ENST00000595756 CHMP4BQ9H444 224 aaKnown RBP21.9■■□□□ 1.1
HOMER3-208ENST00000595756 AATFQ9NY61 560 aaKnown RBP eCLIP21.9■■□□□ 1.1
HOMER3-208ENST00000595756 TLR7Q9NYK1 1049 aaKnown RBP21.9■■□□□ 1.1
HOMER3-208ENST00000595756 HERC5Q9UII4 1024 aaKnown RBP21.9■■□□□ 1.1
HOMER3-208ENST00000595756 FAM196BA6NMK8 535 aa21.89■■□□□ 1.09
HOMER3-208ENST00000595756 CYP2C8P10632 490 aa21.89■■□□□ 1.09
HOMER3-208ENST00000595756 PSMC4P43686 418 aa21.89■■□□□ 1.09
HOMER3-208ENST00000595756 GADL1Q6ZQY3 521 aa21.89■■□□□ 1.09
HOMER3-208ENST00000595756 ERC1Q8IUD2 1116 aa21.89■■□□□ 1.09
HOMER3-208ENST00000595756 PANK1Q8TE04 598 aa21.89■■□□□ 1.09
HOMER3-208ENST00000595756 EAF2Q96CJ1 260 aaPredicted RBP21.89■■□□□ 1.09
HOMER3-208ENST00000595756 TMEM106CQ9BVX2 250 aa21.89■■□□□ 1.09
HOMER3-208ENST00000595756 DHX36Q9H2U1 1008 aaKnown RBP21.89■■□□□ 1.09
HOMER3-208ENST00000595756 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.89■■□□□ 1.09
HOMER3-208ENST00000595756 SRRDQ9UH36 339 aa21.89■■□□□ 1.09
HOMER3-208ENST00000595756 FLT1P17948 1338 aa21.88■■□□□ 1.09
HOMER3-208ENST00000595756 TRIM75PA6NK02 468 aa21.88■■□□□ 1.09
HOMER3-208ENST00000595756 ZAP70P43403 619 aa21.88■■□□□ 1.09
HOMER3-208ENST00000595756 ADGRA1Q86SQ6 560 aa21.88■■□□□ 1.09
HOMER3-208ENST00000595756 AGTPBP1Q9UPW5 1226 aa21.88■■□□□ 1.09
HOMER3-208ENST00000595756 DDX60LQ5H9U9 1706 aaKnown RBP21.87■■□□□ 1.09
HOMER3-208ENST00000595756 MYH1P12882 1939 aa21.87■■□□□ 1.09
HOMER3-208ENST00000595756 OSBPP22059 807 aa21.87■■□□□ 1.09
HOMER3-208ENST00000595756 HOXD10P28358 340 aa21.87■■□□□ 1.09
HOMER3-208ENST00000595756 CCDC8Q9H0W5 538 aaPredicted RBP21.87■■□□□ 1.09
HOMER3-208ENST00000595756 PIH1D3Q9NQM4 214 aaKnown RBP21.87■■□□□ 1.09
HOMER3-208ENST00000595756 PI4KBQ9UBF8 816 aa21.87■■□□□ 1.09
HOMER3-208ENST00000595756 MYPNQ86TC9 1320 aa21.86■■□□□ 1.09
HOMER3-208ENST00000595756 FMNL1O95466 1100 aaPredicted RBP21.86■■□□□ 1.09
HOMER3-208ENST00000595756 CAP2P40123 477 aa21.86■■□□□ 1.09
HOMER3-208ENST00000595756 FCGRTP55899 365 aa21.86■■□□□ 1.09
HOMER3-208ENST00000595756 TMED8Q6PL24 325 aaPredicted RBP21.86■■□□□ 1.09
HOMER3-208ENST00000595756 CCDC84Q86UT8 332 aaPredicted RBP21.86■■□□□ 1.09
HOMER3-208ENST00000595756 PROCA1Q8NCQ7 364 aaPredicted RBP21.86■■□□□ 1.09
HOMER3-208ENST00000595756 SH3TC2Q8TF17 1288 aa21.86■■□□□ 1.09
HOMER3-208ENST00000595756 EXOC6BQ9Y2D4 811 aa21.86■■□□□ 1.09
HOMER3-208ENST00000595756 EN2P19622 333 aaPredicted RBP21.85■■□□□ 1.09
HOMER3-208ENST00000595756 HSP90AB4PQ58FF6 505 aa21.85■■□□□ 1.09
HOMER3-208ENST00000595756 CERS3Q8IU89 383 aa21.85■■□□□ 1.09
HOMER3-208ENST00000595756 ZNF280CQ8ND82 737 aa21.85■■□□□ 1.09
HOMER3-208ENST00000595756 PNMA3Q9UL41 463 aa21.85■■□□□ 1.09
HOMER3-208ENST00000595756 DDX19BQ9UMR2 479 aa21.85■■□□□ 1.09
HOMER3-208ENST00000595756 SLC4A8Q2Y0W8 1093 aa21.84■■□□□ 1.09
HOMER3-208ENST00000595756 METTL16Q86W50 562 aaKnown RBP21.84■■□□□ 1.09
HOMER3-208ENST00000595756 MAPKAPK5Q8IW41 473 aa21.84■■□□□ 1.09
HOMER3-208ENST00000595756 RAET1EQ8TD07 263 aa21.84■■□□□ 1.09
HOMER3-208ENST00000595756 SMCR8Q8TEV9 937 aaPredicted RBP21.84■■□□□ 1.09
HOMER3-208ENST00000595756 TGFBRAP1Q8WUH2 860 aa21.84■■□□□ 1.09
HOMER3-208ENST00000595756 NAV1Q8NEY1 1877 aa21.83■■□□□ 1.09
HOMER3-208ENST00000595756 RRP1BQ14684 758 aaKnown RBP21.83■■□□□ 1.09
HOMER3-208ENST00000595756 AACSQ86V21 672 aa21.83■■□□□ 1.09
HOMER3-208ENST00000595756 DNAJC18Q9H819 358 aa21.83■■□□□ 1.09
HOMER3-208ENST00000595756 AS3MTQ9HBK9 375 aa21.83■■□□□ 1.09
HOMER3-208ENST00000595756 USP17L5A8MUK1 530 aa21.82■■□□□ 1.08
HOMER3-208ENST00000595756 IDH1O75874 414 aaKnown RBP21.82■■□□□ 1.08
HOMER3-208ENST00000595756 ECM2O94769 699 aaPredicted RBP21.82■■□□□ 1.08
HOMER3-208ENST00000595756 GRK4P32298 578 aa21.82■■□□□ 1.08
HOMER3-208ENST00000595756 RRP1P56182 461 aaKnown RBP21.82■■□□□ 1.08
HOMER3-208ENST00000595756 PRKCZQ05513 592 aa21.82■■□□□ 1.08
HOMER3-208ENST00000595756 SPP2Q13103 211 aa21.82■■□□□ 1.08
HOMER3-208ENST00000595756 TREML2Q5T2D2 321 aa21.82■■□□□ 1.08
HOMER3-208ENST00000595756 ASNSP08243 561 aa21.81■■□□□ 1.08
HOMER3-208ENST00000595756 CYP7A1P22680 504 aa21.81■■□□□ 1.08
HOMER3-208ENST00000595756 PABPC4Q13310 644 aaKnown RBP eCLIP21.81■■□□□ 1.08
HOMER3-208ENST00000595756 SH3D19Q5HYK7 790 aa21.81■■□□□ 1.08
HOMER3-208ENST00000595756 GINM1Q9NU53 330 aa21.81■■□□□ 1.08
HOMER3-208ENST00000595756 HLA-DOAP06340 250 aa21.8■■□□□ 1.08
HOMER3-208ENST00000595756 HMGCS2P54868 508 aa21.8■■□□□ 1.08
HOMER3-208ENST00000595756 FAM110CQ1W6H9 321 aa21.8■■□□□ 1.08
HOMER3-208ENST00000595756 FOXP4Q8IVH2 680 aaPredicted RBP21.8■■□□□ 1.08
HOMER3-208ENST00000595756 RPAP2Q8IXW5 612 aaPredicted RBP21.8■■□□□ 1.08
HOMER3-208ENST00000595756 CRACR2BQ8N4Y2 399 aaPredicted RBP21.8■■□□□ 1.08
HOMER3-208ENST00000595756 SLAIN1Q8ND83 568 aa21.8■■□□□ 1.08
HOMER3-208ENST00000595756 RHPN1Q8TCX5 695 aa21.8■■□□□ 1.08
HOMER3-208ENST00000595756 WDR18Q9BV38 432 aa21.8■■□□□ 1.08
HOMER3-208ENST00000595756 TRIM34Q9BYJ4 488 aa21.8■■□□□ 1.08
HOMER3-208ENST00000595756 HMMRO75330 724 aa21.79■■□□□ 1.08
HOMER3-208ENST00000595756 MYCP01106 439 aaPredicted RBP21.79■■□□□ 1.08
HOMER3-208ENST00000595756 DYNLL1P63167 89 aaKnown RBP21.79■■□□□ 1.08
HOMER3-208ENST00000595756 MAP3K12Q12852 859 aa21.79■■□□□ 1.08
HOMER3-208ENST00000595756 MAGEB6Q8N7X4 407 aa21.79■■□□□ 1.08
HOMER3-208ENST00000595756 PALD1Q9ULE6 856 aa21.79■■□□□ 1.08
HOMER3-208ENST00000595756 COG6Q9Y2V7 657 aa21.79■■□□□ 1.08
HOMER3-208ENST00000595756 NDUFB9Q9Y6M9 179 aa21.79■■□□□ 1.08
HOMER3-208ENST00000595756 MIGA1Q8NAN2 632 aa21.78■■□□□ 1.08
HOMER3-208ENST00000595756 KIF1BPQ96EK5 621 aa21.78■■□□□ 1.08
HOMER3-208ENST00000595756 ANTXR1Q9H6X2 564 aa21.78■■□□□ 1.08
HOMER3-208ENST00000595756 IL1RAPL2Q9NP60 686 aa21.78■■□□□ 1.08
HOMER3-208ENST00000595756 ZBTB40Q9NUA8 1239 aa21.78■■□□□ 1.08
HOMER3-208ENST00000595756 TNPO2O14787 897 aaKnown RBP21.77■■□□□ 1.08
HOMER3-208ENST00000595756 GCLCP48506 637 aaPredicted RBP21.77■■□□□ 1.08
HOMER3-208ENST00000595756 UBXN2AP68543 259 aa21.77■■□□□ 1.08
HOMER3-208ENST00000595756 TTF1Q15361 905 aaPredicted RBP21.77■■□□□ 1.08
HOMER3-208ENST00000595756 MTFR1Q15390 333 aa21.77■■□□□ 1.08
HOMER3-208ENST00000595756 CLASRPQ8N2M8 674 aaKnown RBP21.77■■□□□ 1.08
HOMER3-208ENST00000595756 ANKRD13CQ8N6S4 541 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms