RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 SMC5Q8IY18 1101 aa13.32□□□□□ -0.28
SHKBP1-206ENST00000595523 CFHR5Q9BXR6 569 aa13.32□□□□□ -0.28
SHKBP1-206ENST00000595523 DNAJC18Q9H819 358 aa13.32□□□□□ -0.28
SHKBP1-206ENST00000595523 SAP30BPQ9UHR5 308 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-206ENST00000595523 PALD1Q9ULE6 856 aa13.32□□□□□ -0.28
SHKBP1-206ENST00000595523 TTC41PQ6P2S7 1318 aa13.32□□□□□ -0.28
SHKBP1-206ENST00000595523 ZSWIM8A7E2V4 1837 aa13.32□□□□□ -0.28
SHKBP1-206ENST00000595523 MAGEB6P1A0A0J9YX57 407 aa13.31□□□□□ -0.28
SHKBP1-206ENST00000595523 GTF2A2P52657 109 aa13.31□□□□□ -0.28
SHKBP1-206ENST00000595523 METTL16Q86W50 562 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-206ENST00000595523 CERS3Q8IU89 383 aa13.31□□□□□ -0.28
SHKBP1-206ENST00000595523 SCYL3Q8IZE3 742 aa13.31□□□□□ -0.28
SHKBP1-206ENST00000595523 LCORLQ8N3X6 602 aa13.31□□□□□ -0.28
SHKBP1-206ENST00000595523 GPATCH3Q96I76 525 aa13.31□□□□□ -0.28
SHKBP1-206ENST00000595523 DHX36Q9H2U1 1008 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-206ENST00000595523 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.31□□□□□ -0.28
SHKBP1-206ENST00000595523 KCNH4Q9UQ05 1017 aa13.31□□□□□ -0.28
SHKBP1-206ENST00000595523 CCL15-CCL14A0A0B4J2E2 113 aa13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 CTNND1O60716 968 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 PTPRAP18433 802 aa13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 MX1P20591 662 aa13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 MOGSQ13724 837 aa13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 CCL15Q16663 113 aa13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 SLC4A8Q2Y0W8 1093 aa13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 CCDC84Q86UT8 332 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 TNS4Q8IZW8 715 aa13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 KBTBD3Q8NAB2 608 aa13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 PI4KBQ9UBF8 816 aa13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 HERC5Q9UII4 1024 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 CENPFP49454 3210 aa13.3□□□□□ -0.28
SHKBP1-206ENST00000595523 ALDH1A1P00352 501 aa13.29□□□□□ -0.28
SHKBP1-206ENST00000595523 USP5P45974 858 aa13.29□□□□□ -0.28
SHKBP1-206ENST00000595523 JAG1P78504 1218 aa13.29□□□□□ -0.28
SHKBP1-206ENST00000595523 EVX2Q03828 476 aa13.29□□□□□ -0.28
SHKBP1-206ENST00000595523 SNAPC2Q13487 334 aa13.29□□□□□ -0.28
SHKBP1-206ENST00000595523 UBE3CQ15386 1083 aa13.29□□□□□ -0.28
SHKBP1-206ENST00000595523 SHROOM1Q2M3G4 852 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-206ENST00000595523 FAM43AQ8N2R8 423 aa13.29□□□□□ -0.28
SHKBP1-206ENST00000595523 SDR42E1Q8WUS8 393 aa13.29□□□□□ -0.28
SHKBP1-206ENST00000595523 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.29□□□□□ -0.282e-8■■■■■ 26.9
SHKBP1-206ENST00000595523 PUS7LQ9H0K6 701 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-206ENST00000595523 RWDD1Q9H446 243 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-206ENST00000595523 ARMT1Q9H993 441 aa13.29□□□□□ -0.28
SHKBP1-206ENST00000595523 MGAMO43451 1857 aa13.28□□□□□ -0.28
SHKBP1-206ENST00000595523 BTBD19C9JJ37 291 aa13.28□□□□□ -0.28
SHKBP1-206ENST00000595523 PRKAB2O43741 272 aa13.28□□□□□ -0.28
SHKBP1-206ENST00000595523 MBD4O95243 580 aa13.28□□□□□ -0.28
SHKBP1-206ENST00000595523 CETPP11597 493 aa13.28□□□□□ -0.28
SHKBP1-206ENST00000595523 CAP2P40123 477 aa13.28□□□□□ -0.28
SHKBP1-206ENST00000595523 CRHR2Q13324 411 aa13.28□□□□□ -0.28
SHKBP1-206ENST00000595523 NOM1Q5C9Z4 860 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-206ENST00000595523 ZNF296Q8WUU4 475 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-206ENST00000595523 CRNKL1Q9BZJ0 848 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-206ENST00000595523 STAP2Q9UGK3 403 aa13.28□□□□□ -0.28
SHKBP1-206ENST00000595523 AFG3L2Q9Y4W6 797 aa13.28□□□□□ -0.28
SHKBP1-206ENST00000595523 GPR25O00155 361 aa13.27□□□□□ -0.29
SHKBP1-206ENST00000595523 ERC2O15083 957 aa13.27□□□□□ -0.29
SHKBP1-206ENST00000595523 GLRX3O76003 335 aaKnown RBP13.27□□□□□ -0.29
SHKBP1-206ENST00000595523 PLCD1P51178 756 aa13.27□□□□□ -0.29
SHKBP1-206ENST00000595523 PDE1AP54750 535 aa13.27□□□□□ -0.29
SHKBP1-206ENST00000595523 FOXP4Q8IVH2 680 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-206ENST00000595523 LNPKQ9C0E8 428 aa13.27□□□□□ -0.29
SHKBP1-206ENST00000595523 DCP1AQ9NPI6 582 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-206ENST00000595523 PICK1Q9NRD5 415 aa13.27□□□□□ -0.29
SHKBP1-206ENST00000595523 ZHX2Q9Y6X8 837 aa13.27□□□□□ -0.29
SHKBP1-206ENST00000595523 A0A0G2JLL6 359 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-206ENST00000595523 CXCL11O14625 94 aa13.26□□□□□ -0.29
SHKBP1-206ENST00000595523 HLA-DOAP06340 250 aa13.26□□□□□ -0.29
SHKBP1-206ENST00000595523 CYP2D6P10635 497 aa13.26□□□□□ -0.29
SHKBP1-206ENST00000595523 OTUD7BQ6GQQ9 843 aa13.26□□□□□ -0.29
SHKBP1-206ENST00000595523 B4GALNT3Q6L9W6 998 aa13.26□□□□□ -0.29
SHKBP1-206ENST00000595523 ZSCAN25Q6NSZ9 544 aa13.26□□□□□ -0.29
SHKBP1-206ENST00000595523 PRRT2Q7Z6L0 340 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-206ENST00000595523 OSBP2Q969R2 916 aa13.26□□□□□ -0.29
SHKBP1-206ENST00000595523 GREB1LQ9C091 1923 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-206ENST00000595523 EHD4Q9H223 541 aa13.26□□□□□ -0.29
SHKBP1-206ENST00000595523 DOCK3Q8IZD9 2030 aa13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 SMIM22K7EJ46 135 aa13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 RNF113AO15541 343 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 GDF11O95390 407 aa13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 CAP1Q01518 475 aa13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 NUCB1Q02818 461 aa13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 GABPAQ06546 454 aa13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 TAF1CQ15572 869 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 IFFO2Q5TF58 517 aa13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 GPAT2Q6NUI2 795 aa13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 TATDN1Q6P1N9 297 aa13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 CHD1LQ86WJ1 897 aa13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 CRACR2BQ8N4Y2 399 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 MCM9Q9NXL9 1143 aa13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 SERPINB13Q9UIV8 391 aa13.25□□□□□ -0.29
SHKBP1-206ENST00000595523 ADGRA2Q96PE1 1338 aa13.24□□□□□ -0.29
SHKBP1-206ENST00000595523 TRIM75PA6NK02 468 aa13.24□□□□□ -0.29
SHKBP1-206ENST00000595523 M0R2C6 588 aa13.24□□□□□ -0.29
SHKBP1-206ENST00000595523 SHMT1P34896 483 aa13.24□□□□□ -0.29
SHKBP1-206ENST00000595523 ANKRD23Q86SG2 305 aa13.24□□□□□ -0.29
SHKBP1-206ENST00000595523 TTC6Q86TZ1 520 aa13.24□□□□□ -0.29
SHKBP1-206ENST00000595523 APPBP2Q92624 585 aa13.24□□□□□ -0.29
SHKBP1-206ENST00000595523 STRBPQ96SI9 672 aaKnown RBP13.24□□□□□ -0.29
SHKBP1-206ENST00000595523 MCOLN1Q9GZU1 580 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms