RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 NAPBQ9H115 298 aa11.09□□□□□ -0.63
ZNF548-203ENST00000594668 PHIPQ8WWQ0 1821 aa11.09□□□□□ -0.63
ZNF548-203ENST00000594668 DOCK1Q14185 1865 aa11.08□□□□□ -0.64
ZNF548-203ENST00000594668 TBC1D12O60347 775 aa11.08□□□□□ -0.64
ZNF548-203ENST00000594668 HLA-DOAP06340 250 aa11.08□□□□□ -0.64
ZNF548-203ENST00000594668 GABPAQ06546 454 aa11.08□□□□□ -0.64
ZNF548-203ENST00000594668 RRP1BQ14684 758 aaKnown RBP11.08□□□□□ -0.64
ZNF548-203ENST00000594668 C8orf34Q49A92 452 aa11.08□□□□□ -0.64
ZNF548-203ENST00000594668 STK11IPQ8N1F8 1099 aa11.08□□□□□ -0.64
ZNF548-203ENST00000594668 MAP4K1Q92918 833 aa11.08□□□□□ -0.64
ZNF548-203ENST00000594668 DYNLL2Q96FJ2 89 aa11.08□□□□□ -0.64
ZNF548-203ENST00000594668 DNAJC18Q9H819 358 aa11.08□□□□□ -0.64
ZNF548-203ENST00000594668 INCENPQ9NQS7 918 aa11.08□□□□□ -0.64
ZNF548-203ENST00000594668 ARPP21Q9UBL0 812 aaPredicted RBP11.08□□□□□ -0.64
ZNF548-203ENST00000594668 TACC3Q9Y6A5 838 aa11.08□□□□□ -0.64
ZNF548-203ENST00000594668 PHF20L1A8MW92 1017 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 UBE2Q2LH0YL09 131 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 SEC24BO95487 1268 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 NF2P35240 595 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 HAND2P61296 217 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 CTDSPL2Q05D32 466 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 PPARAQ07869 468 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 KIAA1211Q6ZU35 1233 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 SLC44A5Q8NCS7 719 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 KLRG1Q96E93 195 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 EHD4Q9H223 541 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.07□□□□□ -0.64
ZNF548-203ENST00000594668 GBA2Q9HCG7 927 aaPredicted RBP11.07□□□□□ -0.64
ZNF548-203ENST00000594668 ANO2Q9NQ90 1003 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 SERPINB13Q9UIV8 391 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 ANGEL1Q9UNK9 670 aaKnown RBP11.07□□□□□ -0.64
ZNF548-203ENST00000594668 ZMYM6O95789 1325 aa11.07□□□□□ -0.64
ZNF548-203ENST00000594668 MYH4Q9Y623 1939 aa11.06□□□□□ -0.64
ZNF548-203ENST00000594668 PPP1R12BO60237 982 aaPredicted RBP11.06□□□□□ -0.64
ZNF548-203ENST00000594668 SHMT1P34896 483 aa11.06□□□□□ -0.64
ZNF548-203ENST00000594668 CDK8P49336 464 aa11.06□□□□□ -0.64
ZNF548-203ENST00000594668 TTLL12Q14166 644 aaPredicted RBP11.06□□□□□ -0.64
ZNF548-203ENST00000594668 MAP3K11Q16584 847 aa11.06□□□□□ -0.64
ZNF548-203ENST00000594668 DCAF15Q66K64 600 aa11.06□□□□□ -0.64
ZNF548-203ENST00000594668 AMOTL1Q8IY63 956 aa11.06□□□□□ -0.64
ZNF548-203ENST00000594668 CRACR2BQ8N4Y2 399 aaPredicted RBP11.06□□□□□ -0.64
ZNF548-203ENST00000594668 C2orf69Q8N8R5 385 aa11.06□□□□□ -0.64
ZNF548-203ENST00000594668 HOOK2Q96ED9 719 aa11.06□□□□□ -0.64
ZNF548-203ENST00000594668 ZNF341Q9BYN7 854 aa11.06□□□□□ -0.64
ZNF548-203ENST00000594668 NBPF3Q9H094 633 aa11.06□□□□□ -0.64
ZNF548-203ENST00000594668 HERC5Q9UII4 1024 aaKnown RBP11.06□□□□□ -0.64
ZNF548-203ENST00000594668 ZNF112Q9UJU3 913 aa11.06□□□□□ -0.64
ZNF548-203ENST00000594668 ANAPC4Q9UJX5 808 aa11.06□□□□□ -0.64
ZNF548-203ENST00000594668 RBM8AQ9Y5S9 174 aaKnown RBP11.06□□□□□ -0.64
ZNF548-203ENST00000594668 GREB1LQ9C091 1923 aaPredicted RBP11.05□□□□□ -0.64
ZNF548-203ENST00000594668 TMEM88BA6NKF7 163 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 ZNF213O14771 459 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 INPP5BP32019 993 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 APLP1P51693 650 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 C1QTNF8P60827 252 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 JAG1P78504 1218 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 NECTIN1Q15223 517 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 SHROOM1Q2M3G4 852 aaPredicted RBP11.05□□□□□ -0.64
ZNF548-203ENST00000594668 TATDN1Q6P1N9 297 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.05□□□□□ -0.64
ZNF548-203ENST00000594668 C16orf86Q6ZW13 317 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 ARMC9Q7Z3E5 817 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.05□□□□□ -0.64
ZNF548-203ENST00000594668 ZKSCAN4Q969J2 545 aaPredicted RBP11.05□□□□□ -0.64
ZNF548-203ENST00000594668 CTNNA3Q9UI47 895 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 TAF6LQ9Y6J9 622 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 U3KPZ7 1027 aaPredicted RBP11.05□□□□□ -0.64
ZNF548-203ENST00000594668 PTPRFP10586 1907 aa11.05□□□□□ -0.64
ZNF548-203ENST00000594668 ROBO3Q96MS0 1386 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 CYP21A2P08686 494 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 FGRP09769 529 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 IREB2P48200 963 aaKnown RBP11.04□□□□□ -0.64
ZNF548-203ENST00000594668 FKBP1BP68106 108 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 MAP3K9P80192 1104 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 IMMTQ16891 758 aaKnown RBP11.04□□□□□ -0.64
ZNF548-203ENST00000594668 LDLRAD1Q5T700 205 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 SAPCD2Q86UD0 394 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 TBC1D10CQ8IV04 446 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 NKX2-3Q8TAU0 364 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 CLMNQ96JQ2 1002 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 WRNIP1Q96S55 665 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 USP26Q9BXU7 913 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 TRIM34Q9BYJ4 488 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 TLL2Q9Y6L7 1015 aa11.04□□□□□ -0.64
ZNF548-203ENST00000594668 SLC27A2O14975 620 aa11.03□□□□□ -0.64
ZNF548-203ENST00000594668 PRDM1O75626 825 aa11.03□□□□□ -0.64
ZNF548-203ENST00000594668 REC8O95072 547 aa11.03□□□□□ -0.64
ZNF548-203ENST00000594668 RASA1P20936 1047 aa11.03□□□□□ -0.64
ZNF548-203ENST00000594668 CAP2P40123 477 aa11.03□□□□□ -0.64
ZNF548-203ENST00000594668 HTRA3P83110 453 aa11.03□□□□□ -0.64
ZNF548-203ENST00000594668 VGLL4Q14135 290 aa11.03□□□□□ -0.64
ZNF548-203ENST00000594668 CERKLQ49MI3 558 aaPredicted RBP11.03□□□□□ -0.64
ZNF548-203ENST00000594668 AKNAD1Q5T1N1 836 aa11.03□□□□□ -0.64
ZNF548-203ENST00000594668 CREB3L3Q68CJ9 461 aa11.03□□□□□ -0.64
ZNF548-203ENST00000594668 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.03□□□□□ -0.64
ZNF548-203ENST00000594668 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.03□□□□□ -0.64
ZNF548-203ENST00000594668 SWAP70Q9UH65 585 aa11.03□□□□□ -0.64
ZNF548-203ENST00000594668 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.03□□□□□ -0.64
ZNF548-203ENST00000594668 CTNND1O60716 968 aaKnown RBP11.02□□□□□ -0.65
ZNF548-203ENST00000594668 GDF11O95390 407 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms