RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.45■■□□□ 1.82
HOMER3-206ENST00000594439 SREBF2Q12772 1141 aa26.44■■□□□ 1.82
HOMER3-206ENST00000594439 METTL16Q86W50 562 aaKnown RBP26.44■■□□□ 1.82
HOMER3-206ENST00000594439 PLEKHM2Q8IWE5 1019 aa26.44■■□□□ 1.82
HOMER3-206ENST00000594439 PUS7LQ9H0K6 701 aaKnown RBP26.44■■□□□ 1.82
HOMER3-206ENST00000594439 RNF186Q9NXI6 227 aa26.44■■□□□ 1.82
HOMER3-206ENST00000594439 HERC5Q9UII4 1024 aaKnown RBP26.44■■□□□ 1.82
HOMER3-206ENST00000594439 ZFYP08048 801 aaPredicted RBP26.43■■□□□ 1.82
HOMER3-206ENST00000594439 SAGE1Q9NXZ1 904 aa26.43■■□□□ 1.82
HOMER3-206ENST00000594439 CTNND1O60716 968 aaKnown RBP26.42■■□□□ 1.82
HOMER3-206ENST00000594439 INHBEP58166 350 aa26.42■■□□□ 1.82
HOMER3-206ENST00000594439 PPATQ06203 517 aa26.42■■□□□ 1.82
HOMER3-206ENST00000594439 PPIL2Q13356 520 aa26.42■■□□□ 1.82
HOMER3-206ENST00000594439 FOXP4Q8IVH2 680 aaPredicted RBP26.42■■□□□ 1.82
HOMER3-206ENST00000594439 SCYL3Q8IZE3 742 aa26.42■■□□□ 1.82
HOMER3-206ENST00000594439 SDR42E1Q8WUS8 393 aa26.42■■□□□ 1.82
HOMER3-206ENST00000594439 APPBP2Q92624 585 aa26.42■■□□□ 1.82
HOMER3-206ENST00000594439 MS4A4AQ96JQ5 239 aa26.42■■□□□ 1.82
HOMER3-206ENST00000594439 DNAJC18Q9H819 358 aa26.42■■□□□ 1.82
HOMER3-206ENST00000594439 TSKSQ9UJT2 592 aa26.42■■□□□ 1.82
HOMER3-206ENST00000594439 TESPA1A2RU30 521 aaPredicted RBP26.41■■□□□ 1.82
HOMER3-206ENST00000594439 PRKAB2O43741 272 aa26.41■■□□□ 1.82
HOMER3-206ENST00000594439 TRPA1O75762 1119 aa26.41■■□□□ 1.82
HOMER3-206ENST00000594439 HLA-DOAP06340 250 aa26.41■■□□□ 1.82
HOMER3-206ENST00000594439 RRP1BQ14684 758 aaKnown RBP26.41■■□□□ 1.82
HOMER3-206ENST00000594439 SLC4A8Q2Y0W8 1093 aa26.41■■□□□ 1.82
HOMER3-206ENST00000594439 OSBP2Q969R2 916 aa26.41■■□□□ 1.82
HOMER3-206ENST00000594439 FSD1Q9BTV5 496 aa26.41■■□□□ 1.82
HOMER3-206ENST00000594439 OSBPL3Q9H4L5 887 aa26.41■■□□□ 1.82
HOMER3-206ENST00000594439 ATAD5Q96QE3 1844 aa26.41■■□□□ 1.82
HOMER3-206ENST00000594439 LBX1P52954 281 aa26.4■■□□□ 1.82
HOMER3-206ENST00000594439 LRRFIP1Q32MZ4 808 aaKnown RBP26.4■■□□□ 1.82
HOMER3-206ENST00000594439 DCP1AQ9NPI6 582 aaPredicted RBP26.4■■□□□ 1.82
HOMER3-206ENST00000594439 PHIPQ8WWQ0 1821 aa26.39■■□□□ 1.82
HOMER3-206ENST00000594439 BAZ2AQ9UIF9 1905 aaKnown RBP26.39■■□□□ 1.82
HOMER3-206ENST00000594439 IRF6O14896 467 aa26.39■■□□□ 1.82
HOMER3-206ENST00000594439 EVI5LQ96CN4 794 aa26.39■■□□□ 1.82
HOMER3-206ENST00000594439 IGF2BP3O00425 579 aaKnown RBP eCLIP26.38■■□□□ 1.81
HOMER3-206ENST00000594439 GTF2A2P52657 109 aa26.38■■□□□ 1.81
HOMER3-206ENST00000594439 TTC6Q86TZ1 520 aa26.38■■□□□ 1.81
HOMER3-206ENST00000594439 IFNL1Q8IU54 200 aa26.38■■□□□ 1.81
HOMER3-206ENST00000594439 CRACR2BQ8N4Y2 399 aaPredicted RBP26.38■■□□□ 1.81
HOMER3-206ENST00000594439 BRI3BPQ8WY22 251 aa26.38■■□□□ 1.81
HOMER3-206ENST00000594439 STRBPQ96SI9 672 aaKnown RBP26.38■■□□□ 1.81
HOMER3-206ENST00000594439 EHD4Q9H223 541 aa26.38■■□□□ 1.81
HOMER3-206ENST00000594439 PRDM10Q9NQV6 1147 aa26.38■■□□□ 1.81
HOMER3-206ENST00000594439 PICK1Q9NRD5 415 aa26.38■■□□□ 1.81
HOMER3-206ENST00000594439 ATP8A2Q9NTI2 1148 aa26.38■■□□□ 1.81
HOMER3-206ENST00000594439 MCM9Q9NXL9 1143 aa26.38■■□□□ 1.81
HOMER3-206ENST00000594439 PTPRAP18433 802 aa26.37■■□□□ 1.81
HOMER3-206ENST00000594439 PDE4AP27815 886 aa26.37■■□□□ 1.81
HOMER3-206ENST00000594439 CAP2P40123 477 aa26.37■■□□□ 1.81
HOMER3-206ENST00000594439 PLCD1P51178 756 aa26.37■■□□□ 1.81
HOMER3-206ENST00000594439 PTPN18Q99952 460 aa26.37■■□□□ 1.81
HOMER3-206ENST00000594439 KCNH4Q9UQ05 1017 aa26.37■■□□□ 1.81
HOMER3-206ENST00000594439 SLC4A4Q9Y6R1 1079 aa26.37■■□□□ 1.81
HOMER3-206ENST00000594439 CCL15-CCL14A0A0B4J2E2 113 aa26.36■■□□□ 1.81
HOMER3-206ENST00000594439 M0R2C6 588 aa26.36■■□□□ 1.81
HOMER3-206ENST00000594439 POLR3DP05423 398 aaPredicted RBP26.36■■□□□ 1.81
HOMER3-206ENST00000594439 CCL15Q16663 113 aa26.36■■□□□ 1.81
HOMER3-206ENST00000594439 ZMYM1Q5SVZ6 1142 aa26.36■■□□□ 1.81
HOMER3-206ENST00000594439 TRIM34Q9BYJ4 488 aa26.36■■□□□ 1.81
HOMER3-206ENST00000594439 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.36■■□□□ 1.81
HOMER3-206ENST00000594439 SERPINB13Q9UIV8 391 aa26.36■■□□□ 1.81
HOMER3-206ENST00000594439 EVX2Q03828 476 aa26.35■■□□□ 1.81
HOMER3-206ENST00000594439 SNAPC2Q13487 334 aa26.35■■□□□ 1.81
HOMER3-206ENST00000594439 ZHX2Q9Y6X8 837 aa26.35■■□□□ 1.81
HOMER3-206ENST00000594439 GPAA1O43292 621 aa26.34■■□□□ 1.81
HOMER3-206ENST00000594439 CYP2D6P10635 497 aa26.34■■□□□ 1.81
HOMER3-206ENST00000594439 CETPP11597 493 aa26.34■■□□□ 1.81
HOMER3-206ENST00000594439 SEC62Q99442 399 aaKnown RBP26.34■■□□□ 1.81
HOMER3-206ENST00000594439 PTPRFP10586 1907 aa26.33■■□□□ 1.81
HOMER3-206ENST00000594439 ALDH1A1P00352 501 aa26.33■■□□□ 1.81
HOMER3-206ENST00000594439 JAG1P78504 1218 aa26.33■■□□□ 1.81
HOMER3-206ENST00000594439 GABPAQ06546 454 aa26.33■■□□□ 1.81
HOMER3-206ENST00000594439 TATDN1Q6P1N9 297 aa26.33■■□□□ 1.81
HOMER3-206ENST00000594439 CCDC84Q86UT8 332 aaPredicted RBP26.33■■□□□ 1.81
HOMER3-206ENST00000594439 CFHR5Q9BXR6 569 aa26.33■■□□□ 1.81
HOMER3-206ENST00000594439 AFG3L2Q9Y4W6 797 aa26.33■■□□□ 1.81
HOMER3-206ENST00000594439 GSG1L2A8MUP6 293 aa26.32■■□□□ 1.8
HOMER3-206ENST00000594439 CXCL11O14625 94 aa26.32■■□□□ 1.8
HOMER3-206ENST00000594439 TBC1D8O95759 1140 aa26.32■■□□□ 1.8
HOMER3-206ENST00000594439 COL13A1Q5TAT6 717 aaPredicted RBP26.32■■□□□ 1.8
HOMER3-206ENST00000594439 CASP8AP2Q9UKL3 1982 aa26.32■■□□□ 1.8
HOMER3-206ENST00000594439 TRIM6-TRIM34B2RNG4 842 aa26.31■■□□□ 1.8
HOMER3-206ENST00000594439 SHROOM1Q2M3G4 852 aaPredicted RBP26.31■■□□□ 1.8
HOMER3-206ENST00000594439 OTUD7BQ6GQQ9 843 aa26.31■■□□□ 1.8
HOMER3-206ENST00000594439 TICAM2Q86XR7 235 aa26.31■■□□□ 1.8
HOMER3-206ENST00000594439 USP17L12C9JPN9 530 aa26.3■■□□□ 1.8
HOMER3-206ENST00000594439 USP17L21D6R901 530 aa26.3■■□□□ 1.8
HOMER3-206ENST00000594439 GDF11O95390 407 aa26.3■■□□□ 1.8
HOMER3-206ENST00000594439 SHMT1P34896 483 aa26.3■■□□□ 1.8
HOMER3-206ENST00000594439 MOGSQ13724 837 aa26.3■■□□□ 1.8
HOMER3-206ENST00000594439 C12orf60Q5U649 245 aa26.3■■□□□ 1.8
HOMER3-206ENST00000594439 FAM43AQ8N2R8 423 aa26.3■■□□□ 1.8
HOMER3-206ENST00000594439 DDRGK1Q96HY6 314 aa26.3■■□□□ 1.8
HOMER3-206ENST00000594439 R3HDMLQ9H3Y0 253 aa26.3■■□□□ 1.8
HOMER3-206ENST00000594439 GINM1Q9NU53 330 aa26.3■■□□□ 1.8
HOMER3-206ENST00000594439 CYP2D7A0A087X1C5 515 aa26.29■■□□□ 1.8
HOMER3-206ENST00000594439 BTBD19C9JJ37 291 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms