RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 TRIM75PA6NK02 468 aa14.61□□□□□ -0.07
SOD3-202ENST00000593742 PDHXO00330 501 aa14.61□□□□□ -0.07
SOD3-202ENST00000593742 PLCG2P16885 1265 aa14.61□□□□□ -0.07
SOD3-202ENST00000593742 PTPRAP18433 802 aa14.61□□□□□ -0.07
SOD3-202ENST00000593742 PDE3AQ14432 1141 aa14.61□□□□□ -0.07
SOD3-202ENST00000593742 GADL1Q6ZQY3 521 aa14.61□□□□□ -0.07
SOD3-202ENST00000593742 SAP30BPQ9UHR5 308 aaKnown RBP14.61□□□□□ -0.07
SOD3-202ENST00000593742 KCNH4Q9UQ05 1017 aa14.61□□□□□ -0.07
SOD3-202ENST00000593742 DOCK1Q14185 1865 aa14.61□□□□□ -0.07
SOD3-202ENST00000593742 MAP4K4O95819 1239 aaPredicted RBP14.6□□□□□ -0.07
SOD3-202ENST00000593742 CAP1Q01518 475 aa14.6□□□□□ -0.07
SOD3-202ENST00000593742 MLLT1Q03111 559 aaPredicted RBP14.6□□□□□ -0.07
SOD3-202ENST00000593742 MAP3K12Q12852 859 aa14.6□□□□□ -0.07
SOD3-202ENST00000593742 TRIM34Q9BYJ4 488 aa14.6□□□□□ -0.07
SOD3-202ENST00000593742 CPA4Q9UI42 421 aa14.6□□□□□ -0.07
SOD3-202ENST00000593742 FLT1P17948 1338 aa14.6□□□□□ -0.07
SOD3-202ENST00000593742 TLR2O60603 784 aa14.59□□□□□ -0.07
SOD3-202ENST00000593742 CTNND1O60716 968 aaKnown RBP14.59□□□□□ -0.07
SOD3-202ENST00000593742 RAB11FIP3O75154 756 aa14.59□□□□□ -0.07
SOD3-202ENST00000593742 USP5P45974 858 aa14.59□□□□□ -0.07
SOD3-202ENST00000593742 ANKRD23Q86SG2 305 aa14.59□□□□□ -0.07
SOD3-202ENST00000593742 CRACR2BQ8N4Y2 399 aaPredicted RBP14.59□□□□□ -0.07
SOD3-202ENST00000593742 PALD1Q9ULE6 856 aa14.59□□□□□ -0.07
SOD3-202ENST00000593742 GOLIM4O00461 696 aa14.58□□□□□ -0.08
SOD3-202ENST00000593742 CXCL11O14625 94 aa14.58□□□□□ -0.08
SOD3-202ENST00000593742 SMARCA5O60264 1052 aaPredicted RBP14.58□□□□□ -0.08
SOD3-202ENST00000593742 TBC1D12O60347 775 aa14.58□□□□□ -0.08
SOD3-202ENST00000593742 CYP2C8P10632 490 aa14.58□□□□□ -0.08
SOD3-202ENST00000593742 PPP4CP60510 307 aa14.58□□□□□ -0.08
SOD3-202ENST00000593742 MAP3K10Q02779 954 aa14.58□□□□□ -0.08
SOD3-202ENST00000593742 KIF22Q14807 665 aa14.58□□□□□ -0.08
SOD3-202ENST00000593742 CHRDL2Q6WN34 429 aa14.58□□□□□ -0.08
SOD3-202ENST00000593742 ARHGAP39Q9C0H5 1083 aa14.58□□□□□ -0.08
SOD3-202ENST00000593742 ZCCHC17Q9NP64 241 aaKnown RBP14.58□□□□□ -0.08
SOD3-202ENST00000593742 PI4KBQ9UBF8 816 aa14.58□□□□□ -0.08
SOD3-202ENST00000593742 PTPN22Q9Y2R2 807 aa14.58□□□□□ -0.08
SOD3-202ENST00000593742 CDK5RAP2Q96SN8 1893 aa14.58□□□□□ -0.08
SOD3-202ENST00000593742 COL2A1P02458 1487 aaPredicted RBP14.57□□□□□ -0.08
SOD3-202ENST00000593742 ZSWIM8A7E2V4 1837 aa14.57□□□□□ -0.08
SOD3-202ENST00000593742 MOGSQ13724 837 aa14.57□□□□□ -0.08
SOD3-202ENST00000593742 RRP1BQ14684 758 aaKnown RBP14.57□□□□□ -0.08
SOD3-202ENST00000593742 TTF1Q15361 905 aaPredicted RBP14.57□□□□□ -0.08
SOD3-202ENST00000593742 FASTKD5Q7L8L6 764 aaKnown RBP14.57□□□□□ -0.08
SOD3-202ENST00000593742 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
SOD3-202ENST00000593742 PARK7Q99497 189 aaKnown RBP14.57□□□□□ -0.08
SOD3-202ENST00000593742 DHX36Q9H2U1 1008 aaKnown RBP14.57□□□□□ -0.08
SOD3-202ENST00000593742 BOLA2Q9H3K6 86 aa14.57□□□□□ -0.08
SOD3-202ENST00000593742 AFG3L2Q9Y4W6 797 aa14.57□□□□□ -0.08
SOD3-202ENST00000593742 ATAD5Q96QE3 1844 aa14.57□□□□□ -0.08
SOD3-202ENST00000593742 CENPFP49454 3210 aa14.56□□□□□ -0.08
SOD3-202ENST00000593742 KIAA0100Q14667 2235 aaKnown RBP14.56□□□□□ -0.08
SOD3-202ENST00000593742 A0A0G2JLL6 359 aaPredicted RBP14.56□□□□□ -0.08
SOD3-202ENST00000593742 GDF11O95390 407 aa14.56□□□□□ -0.08
SOD3-202ENST00000593742 MYCP01106 439 aaPredicted RBP14.56□□□□□ -0.08
SOD3-202ENST00000593742 HLA-DOAP06340 250 aa14.56□□□□□ -0.08
SOD3-202ENST00000593742 LACTBP83111 547 aaPredicted RBP14.56□□□□□ -0.08
SOD3-202ENST00000593742 ARHGEF6Q15052 776 aa14.56□□□□□ -0.08
SOD3-202ENST00000593742 SLC9C2Q5TAH2 1124 aa14.56□□□□□ -0.08
SOD3-202ENST00000593742 GPAT2Q6NUI2 795 aa14.56□□□□□ -0.08
SOD3-202ENST00000593742 PRRT2Q7Z6L0 340 aaPredicted RBP14.56□□□□□ -0.08
SOD3-202ENST00000593742 LRRCC1Q9C099 1032 aa14.56□□□□□ -0.08
SOD3-202ENST00000593742 HERC5Q9UII4 1024 aaKnown RBP14.56□□□□□ -0.08
SOD3-202ENST00000593742 FOCADQ5VW36 1801 aa14.56□□□□□ -0.08
SOD3-202ENST00000593742 HTTP42858 3142 aa14.56□□□□□ -0.08
SOD3-202ENST00000593742 PDE4DIPQ5VU43 2346 aa14.55□□□□□ -0.08
SOD3-202ENST00000593742 SIPA1L1O43166 1804 aa14.55□□□□□ -0.08
SOD3-202ENST00000593742 PHIPQ8WWQ0 1821 aa14.55□□□□□ -0.08
SOD3-202ENST00000593742 MAGEB6P1A0A0J9YX57 407 aa14.55□□□□□ -0.08
SOD3-202ENST00000593742 PDE6AP16499 860 aa14.55□□□□□ -0.08
SOD3-202ENST00000593742 CAP2P40123 477 aa14.55□□□□□ -0.08
SOD3-202ENST00000593742 RGS19P49795 217 aa14.55□□□□□ -0.08
SOD3-202ENST00000593742 SPP2Q13103 211 aa14.55□□□□□ -0.08
SOD3-202ENST00000593742 SMCR8Q8TEV9 937 aaPredicted RBP14.55□□□□□ -0.08
SOD3-202ENST00000593742 PTCH2Q9Y6C5 1203 aa14.55□□□□□ -0.08
SOD3-202ENST00000593742 PTPRFP10586 1907 aa14.54□□□□□ -0.08
SOD3-202ENST00000593742 MYH1P12882 1939 aa14.54□□□□□ -0.08
SOD3-202ENST00000593742 IGSF3O75054 1194 aa14.54□□□□□ -0.08
SOD3-202ENST00000593742 HMGCS2P54868 508 aa14.54□□□□□ -0.08
SOD3-202ENST00000593742 SHROOM1Q2M3G4 852 aaPredicted RBP14.54□□□□□ -0.08
SOD3-202ENST00000593742 TREML2Q5T2D2 321 aa14.54□□□□□ -0.08
SOD3-202ENST00000593742 C17orf99Q6UX52 265 aa14.54□□□□□ -0.08
SOD3-202ENST00000593742 ZNF280CQ8ND82 737 aa14.54□□□□□ -0.08
SOD3-202ENST00000593742 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.54□□□□□ -0.08
SOD3-202ENST00000593742 DNAJC18Q9H819 358 aa14.54□□□□□ -0.08
SOD3-202ENST00000593742 PAG1Q9NWQ8 432 aa14.54□□□□□ -0.08
SOD3-202ENST00000593742 ZNF532Q9HCE3 1301 aa14.54□□□□□ -0.08
SOD3-202ENST00000593742 ADGRA2Q96PE1 1338 aa14.53□□□□□ -0.08
SOD3-202ENST00000593742 USP17L5A8MUK1 530 aa14.53□□□□□ -0.08
SOD3-202ENST00000593742 FMNL1O95466 1100 aaPredicted RBP14.53□□□□□ -0.08
SOD3-202ENST00000593742 PSMC4P43686 418 aa14.53□□□□□ -0.08
SOD3-202ENST00000593742 RRP1P56182 461 aaKnown RBP14.53□□□□□ -0.08
SOD3-202ENST00000593742 SLFNL1Q499Z3 407 aa14.53□□□□□ -0.08
SOD3-202ENST00000593742 SLC9C1Q4G0N8 1177 aa14.53□□□□□ -0.08
SOD3-202ENST00000593742 AS3MTQ9HBK9 375 aa14.53□□□□□ -0.08
SOD3-202ENST00000593742 CTGFP29279 349 aa14.52□□□□□ -0.09
SOD3-202ENST00000593742 CERS3Q8IU89 383 aa14.52□□□□□ -0.09
SOD3-202ENST00000593742 FOXP4Q8IVH2 680 aaPredicted RBP14.52□□□□□ -0.09
SOD3-202ENST00000593742 SPDYE1Q8NFV5 336 aaPredicted RBP14.52□□□□□ -0.09
SOD3-202ENST00000593742 SH3TC2Q8TF17 1288 aa14.52□□□□□ -0.09
SOD3-202ENST00000593742 RIOK1Q9BRS2 568 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms