RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 MFSD6Q6ZSS7 791 aa17.33■□□□□ 0.36
CAPN12-202ENST00000593700 KRT23Q9C075 422 aa17.33■□□□□ 0.36
CAPN12-202ENST00000593700 NMRK2Q9NPI5 230 aa17.33■□□□□ 0.36
CAPN12-202ENST00000593700 MCM9Q9NXL9 1143 aa17.33■□□□□ 0.36
CAPN12-202ENST00000593700 GPRC5DQ9NZD1 345 aa17.33■□□□□ 0.36
CAPN12-202ENST00000593700 ANAPC4Q9UJX5 808 aa17.33■□□□□ 0.36
CAPN12-202ENST00000593700 WDR19Q8NEZ3 1342 aa17.32■□□□□ 0.36
CAPN12-202ENST00000593700 MINDY4BA8MYZ0 360 aa17.32■□□□□ 0.36
CAPN12-202ENST00000593700 KIF3CO14782 793 aa17.32■□□□□ 0.36
CAPN12-202ENST00000593700 GMPSP49915 693 aaPredicted RBP17.32■□□□□ 0.36
CAPN12-202ENST00000593700 SBK1Q52WX2 424 aa17.32■□□□□ 0.36
CAPN12-202ENST00000593700 AKNAD1Q5T1N1 836 aa17.32■□□□□ 0.36
CAPN12-202ENST00000593700 USP50Q70EL3 339 aaPredicted RBP17.32■□□□□ 0.36
CAPN12-202ENST00000593700 RBM46Q8TBY0 533 aaKnown RBP17.32■□□□□ 0.36
CAPN12-202ENST00000593700 TGFBRAP1Q8WUH2 860 aa17.32■□□□□ 0.36
CAPN12-202ENST00000593700 STAG1Q8WVM7 1258 aa17.32■□□□□ 0.36
CAPN12-202ENST00000593700 ZNF287Q9HBT7 754 aa17.32■□□□□ 0.36
CAPN12-202ENST00000593700 ADARB2Q9NS39 739 aaKnown RBP17.32■□□□□ 0.36
CAPN12-202ENST00000593700 ROBO3Q96MS0 1386 aa17.31■□□□□ 0.36
CAPN12-202ENST00000593700 FLT1P17948 1338 aa17.31■□□□□ 0.36
CAPN12-202ENST00000593700 TOMM70O94826 608 aa17.31■□□□□ 0.36
CAPN12-202ENST00000593700 USP17L8P0C7I0 530 aa17.31■□□□□ 0.36
CAPN12-202ENST00000593700 MCM5P33992 734 aa17.31■□□□□ 0.36
CAPN12-202ENST00000593700 EPHX2P34913 555 aa17.31■□□□□ 0.36
CAPN12-202ENST00000593700 RHBDL3P58872 404 aa17.31■□□□□ 0.36
CAPN12-202ENST00000593700 DHX32Q7L7V1 743 aaKnown RBP17.31■□□□□ 0.36
CAPN12-202ENST00000593700 TAF1DQ9H5J8 278 aaPredicted RBP17.31■□□□□ 0.36
CAPN12-202ENST00000593700 TOMM22Q9NS69 142 aa17.31■□□□□ 0.36
CAPN12-202ENST00000593700 USP40Q9NVE5 1235 aa17.31■□□□□ 0.36
CAPN12-202ENST00000593700 POTECB2RU33 542 aa17.3■□□□□ 0.36
CAPN12-202ENST00000593700 MYO1BO43795 1136 aa17.3■□□□□ 0.36
CAPN12-202ENST00000593700 POLR3DP05423 398 aaPredicted RBP17.3■□□□□ 0.36
CAPN12-202ENST00000593700 PDE4BQ07343 736 aa17.3■□□□□ 0.36
CAPN12-202ENST00000593700 DLGAP5Q15398 846 aa17.3■□□□□ 0.36
CAPN12-202ENST00000593700 CFAP100Q494V2 611 aa17.3■□□□□ 0.36
CAPN12-202ENST00000593700 STOX1Q6ZVD7 989 aa17.3■□□□□ 0.36
CAPN12-202ENST00000593700 TBC1D10CQ8IV04 446 aa17.3■□□□□ 0.36
CAPN12-202ENST00000593700 TTC14Q96N46 770 aa17.3■□□□□ 0.36
CAPN12-202ENST00000593700 GMLQ99445 158 aa17.3■□□□□ 0.36
CAPN12-202ENST00000593700 ALDH8A1Q9H2A2 487 aaPredicted RBP17.3■□□□□ 0.36
CAPN12-202ENST00000593700 CNOT7Q9UIV1 285 aaKnown RBP17.3■□□□□ 0.36
CAPN12-202ENST00000593700 COL2A1P02458 1487 aaPredicted RBP17.3■□□□□ 0.36
CAPN12-202ENST00000593700 USP17L12C9JPN9 530 aa17.29■□□□□ 0.36
CAPN12-202ENST00000593700 USP17L21D6R901 530 aa17.29■□□□□ 0.36
CAPN12-202ENST00000593700 FSTL1Q12841 308 aa17.29■□□□□ 0.36
CAPN12-202ENST00000593700 SART3Q15020 963 aaKnown RBP17.29■□□□□ 0.36
CAPN12-202ENST00000593700 CTR9Q6PD62 1173 aa17.29■□□□□ 0.36
CAPN12-202ENST00000593700 LDHDQ86WU2 507 aa17.29■□□□□ 0.36
CAPN12-202ENST00000593700 MAPKAPK5Q8IW41 473 aa17.29■□□□□ 0.36
CAPN12-202ENST00000593700 ZSCAN31Q96LW9 406 aaPredicted RBP17.29■□□□□ 0.36
CAPN12-202ENST00000593700 SH2B1Q9NRF2 756 aaPredicted RBP17.29■□□□□ 0.36
CAPN12-202ENST00000593700 HLA-DOAP06340 250 aa17.28■□□□□ 0.36
CAPN12-202ENST00000593700 AK2P54819 239 aa17.28■□□□□ 0.36
CAPN12-202ENST00000593700 CTDSPL2Q05D32 466 aa17.28■□□□□ 0.36
CAPN12-202ENST00000593700 APOBEC3HQ6NTF7 200 aaKnown RBP17.28■□□□□ 0.36
CAPN12-202ENST00000593700 CDC42EP5Q6NZY7 148 aa17.28■□□□□ 0.36
CAPN12-202ENST00000593700 TTC6Q86TZ1 520 aa17.28■□□□□ 0.36
CAPN12-202ENST00000593700 MICALL2Q8IY33 904 aa17.28■□□□□ 0.36
CAPN12-202ENST00000593700 MB21D2Q8IYB1 491 aaPredicted RBP17.28■□□□□ 0.36
CAPN12-202ENST00000593700 SMC1BQ8NDV3 1235 aa17.28■□□□□ 0.36
CAPN12-202ENST00000593700 ZC3H15Q8WU90 426 aaKnown RBP17.28■□□□□ 0.36
CAPN12-202ENST00000593700 ESR2Q92731 530 aa17.28■□□□□ 0.36
CAPN12-202ENST00000593700 MTA3Q9BTC8 594 aa17.28■□□□□ 0.36
CAPN12-202ENST00000593700 LIMCH1Q9UPQ0 1083 aa17.28■□□□□ 0.36
CAPN12-202ENST00000593700 TAF6LQ9Y6J9 622 aa17.28■□□□□ 0.36
CAPN12-202ENST00000593700 NEDD4P46934 1319 aa17.27■□□□□ 0.36
CAPN12-202ENST00000593700 SIPA1L1O43166 1804 aa17.27■□□□□ 0.36
CAPN12-202ENST00000593700 ERICH2A1L162 156 aa17.27■□□□□ 0.36
CAPN12-202ENST00000593700 EPS15P42566 896 aa17.27■□□□□ 0.36
CAPN12-202ENST00000593700 ZNF280AP59817 542 aaPredicted RBP17.27■□□□□ 0.36
CAPN12-202ENST00000593700 PICALMQ13492 652 aa17.27■□□□□ 0.36
CAPN12-202ENST00000593700 C12orf60Q5U649 245 aa17.27■□□□□ 0.36
CAPN12-202ENST00000593700 MTMR14Q8NCE2 650 aa17.27■□□□□ 0.36
CAPN12-202ENST00000593700 CHMP4CQ96CF2 233 aa17.27■□□□□ 0.36
CAPN12-202ENST00000593700 TMEM87BQ96K49 555 aa17.27■□□□□ 0.36
CAPN12-202ENST00000593700 MKRN1Q9UHC7 482 aaKnown RBP17.27■□□□□ 0.36
CAPN12-202ENST00000593700 B4E1Z4 1266 aa17.26■□□□□ 0.35
CAPN12-202ENST00000593700 CD2BP2O95400 341 aaKnown RBP17.26■□□□□ 0.35
CAPN12-202ENST00000593700 CPA1P15085 419 aa17.26■□□□□ 0.35
CAPN12-202ENST00000593700 RRP12Q5JTH9 1297 aaKnown RBP17.26■□□□□ 0.35
CAPN12-202ENST00000593700 Q6ZUG5 572 aa17.26■□□□□ 0.35
CAPN12-202ENST00000593700 NOL8Q76FK4 1167 aaKnown RBP17.26■□□□□ 0.35
CAPN12-202ENST00000593700 IDI2Q9BXS1 227 aa17.26■□□□□ 0.35
CAPN12-202ENST00000593700 NBPF3Q9H094 633 aa17.26■□□□□ 0.35
CAPN12-202ENST00000593700 OSBPL5Q9H0X9 879 aaPredicted RBP17.26■□□□□ 0.35
CAPN12-202ENST00000593700 DHX36Q9H2U1 1008 aaKnown RBP17.26■□□□□ 0.35
CAPN12-202ENST00000593700 PRC1O43663 620 aa17.25■□□□□ 0.35
CAPN12-202ENST00000593700 ORC4O43929 436 aa17.25■□□□□ 0.35
CAPN12-202ENST00000593700 WDHD1O75717 1129 aaPredicted RBP17.25■□□□□ 0.35
CAPN12-202ENST00000593700 PSEN1P49768 467 aa17.25■□□□□ 0.35
CAPN12-202ENST00000593700 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
CAPN12-202ENST00000593700 FBXL16Q8N461 479 aa17.25■□□□□ 0.35
CAPN12-202ENST00000593700 UBAC1Q9BSL1 405 aa17.25■□□□□ 0.35
CAPN12-202ENST00000593700 SAP30BPQ9UHR5 308 aaKnown RBP17.25■□□□□ 0.35
CAPN12-202ENST00000593700 MYH6P13533 1939 aa17.24■□□□□ 0.35
CAPN12-202ENST00000593700 ENTPD3O75355 529 aa17.24■□□□□ 0.35
CAPN12-202ENST00000593700 EAPPQ56P03 285 aaPredicted RBP17.24■□□□□ 0.35
CAPN12-202ENST00000593700 TMX3Q96JJ7 454 aa17.24■□□□□ 0.35
CAPN12-202ENST00000593700 TRIM34Q9BYJ4 488 aa17.24■□□□□ 0.35
CAPN12-202ENST00000593700 MYOZ2Q9NPC6 264 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms