RNA–Protein interactions for RNA: ENST00000592763.5

ILF3-222, Transcript of interleukin enhancer binding factor 3, human

TSL 5 BASIC

Gene ILF3, Length 3,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-222	ENST00000592763	JMY	Q8N9B5	988 aa		12.54	□□□□□ -0.4
ILF3-222	ENST00000592763	CNKSR1	Q969H4	720 aa		12.54	□□□□□ -0.4
ILF3-222	ENST00000592763	ATP8A2	Q9NTI2	1148 aa		12.54	□□□□□ -0.4
ILF3-222	ENST00000592763	PKD1L3	Q7Z443	1732 aa		12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	GRIK5	Q16478	980 aa		12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	SOGA3	Q5TF21	947 aa		12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	TEKT1	Q969V4	418 aa		12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	CABP5	Q9NP86	173 aa		12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	ARPP21	Q9UBL0	812 aa	Predicted RBP	12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	PSD	A5PKW4	1024 aa	Predicted RBP	12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	FAM196B	A6NMK8	535 aa		12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	CDC27	P30260	824 aa		12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	DIS3L2	Q8IYB7	885 aa	Known RBP	12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	SPC24	Q8NBT2	197 aa		12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	AFDN	P55196	1824 aa	Known RBP	12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	TCRBV5S4A2T	A0A5A2	114 aa		12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	UBE2Q2L	H0YL09	131 aa		12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	ST3GAL1	Q11201	340 aa		12.53	□□□□□ -0.4
ILF3-222	ENST00000592763	BTBD18	B2RXH4	712 aa		12.52	□□□□□ -0.4
ILF3-222	ENST00000592763	EVX2	Q03828	476 aa		12.52	□□□□□ -0.4
ILF3-222	ENST00000592763	SEC63	Q9UGP8	760 aa	Known RBP	12.52	□□□□□ -0.4
ILF3-222	ENST00000592763	GJA3	Q9Y6H8	435 aa		12.52	□□□□□ -0.4
ILF3-222	ENST00000592763	CLRN2	A0PK11	232 aa		12.52	□□□□□ -0.41
ILF3-222	ENST00000592763	LIG1	P18858	919 aa		12.52	□□□□□ -0.41
ILF3-222	ENST00000592763	TM4SF1	P30408	202 aa		12.52	□□□□□ -0.41
ILF3-222	ENST00000592763	JDP2	Q8WYK2	163 aa		12.52	□□□□□ -0.41
ILF3-222	ENST00000592763	SRGN	P10124	158 aa		12.52	□□□□□ -0.41
ILF3-222	ENST00000592763	KCNB2	Q92953	911 aa		12.52	□□□□□ -0.41
ILF3-222	ENST00000592763	CPVL	Q9H3G5	476 aa		12.52	□□□□□ -0.41
ILF3-222	ENST00000592763	USP25	Q9UHP3	1055 aa		12.52	□□□□□ -0.41
ILF3-222	ENST00000592763	ATP6V0A2	Q9Y487	856 aa		12.52	□□□□□ -0.41
ILF3-222	ENST00000592763	SPTLC2	O15270	562 aa		12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	SP8	Q8IXZ3	490 aa		12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	FBXO18	Q8NFZ0	1043 aa		12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	GPCPD1	Q9NPB8	672 aa		12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	ZMYM6	O95789	1325 aa		12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	PLSCR1	O15162	318 aa		12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	PNMA1	Q8ND90	353 aa		12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	CRAMP1	Q96RY5	1269 aa		12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	LETM1	O95202	739 aa	Predicted RBP	12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	LRSAM1	Q6UWE0	723 aa		12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	LRRC47	Q8N1G4	583 aa	Known RBP	12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	COA1	Q9GZY4	146 aa		12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	RBSN	Q9H1K0	784 aa		12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	LY9	Q9HBG7	655 aa		12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	SCAF8	Q9UPN6	1271 aa	Known RBP	12.51	□□□□□ -0.41
ILF3-222	ENST00000592763	TDRD7	Q8NHU6	1098 aa	Known RBP	12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	CCDC34	Q96HJ3	373 aa		12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	TRIM5	Q9C035	493 aa		12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	NOL7	Q9UMY1	257 aa	Known RBP	12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	RTL9	Q8NET4	1388 aa		12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	TCP10L2	B9ZVM9	353 aa		12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	CTDNEP1	O95476	244 aa		12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	ENAH	Q8N8S7	591 aa	Predicted RBP	12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	STAG1	Q8WVM7	1258 aa		12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	RIOK1	Q9BRS2	568 aa	Known RBP	12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	KCNQ5	Q9NR82	932 aa		12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	CLIP2	Q9UDT6	1046 aa		12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	DOT1L	Q8TEK3	1739 aa		12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	CCDC194	A0A1B0GVG4	234 aa		12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	PLCD1	P51178	756 aa		12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	ZYX	Q15942	572 aa	Known RBP	12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	UBA5	Q9GZZ9	404 aa		12.5	□□□□□ -0.41
ILF3-222	ENST00000592763	PNPLA7	Q6ZV29	1317 aa		12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	PLEKHA8P1	O95397	391 aa		12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	DEXI	O95424	95 aa		12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	DHX8	Q14562	1220 aa	Known RBP	12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	R3HDM1	Q15032	1099 aa	Known RBP	12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	TTLL6	Q8N841	843 aa		12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	UIMC1	Q96RL1	719 aa		12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	CLIC4	Q9Y696	253 aa		12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	NR5A1	Q13285	461 aa		12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	IGDCC4	Q8TDY8	1250 aa		12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.49	□□□□□ -0.41	8e-6	■■□□□ 14
ILF3-222	ENST00000592763	AK9	Q5TCS8	1911 aa		12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	FRMPD2	Q68DX3	1309 aa	Predicted RBP	12.49	□□□□□ -0.41
ILF3-222	ENST00000592763		A0A087WWV3	80 aa		12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	PES1	O00541	588 aa	Known RBP	12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	FOXP2	O15409	715 aa		12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	GOLGB1	Q14789	3259 aa	Known RBP	12.49	□□□□□ -0.41
ILF3-222	ENST00000592763	ARFGEF2	Q9Y6D5	1785 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	NR1I2	O75469	434 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	ZNF174	Q15697	407 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	ALX1	Q15699	326 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	MYSM1	Q5VVJ2	828 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	EP400	Q96L91	3159 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	ECE2	O60344	883 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	CALM1	P0DP23	149 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	CALM2	P0DP24	149 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	CALM3	P0DP25	149 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	GUCY1A2	P33402	732 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	CLEC10A	Q8IUN9	316 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	LIFR	P42702	1097 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	NAPA	P54920	295 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	ANO1	Q5XXA6	986 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	TMC4	Q7Z404	712 aa		12.48	□□□□□ -0.41
ILF3-222	ENST00000592763	TDRD3	Q9H7E2	651 aa	Known RBP	12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms