RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 MIGA1Q8NAN2 632 aa16.9■□□□□ 0.3
APOC1-208ENST00000592535 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.9■□□□□ 0.3
APOC1-208ENST00000592535 PDHXO00330 501 aa16.89■□□□□ 0.29
APOC1-208ENST00000592535 TLR2O60603 784 aa16.89■□□□□ 0.29
APOC1-208ENST00000592535 RGS19P49795 217 aa16.89■□□□□ 0.29
APOC1-208ENST00000592535 RRP1BQ14684 758 aaKnown RBP16.89■□□□□ 0.29
APOC1-208ENST00000592535 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
APOC1-208ENST00000592535 DNAJC2Q99543 621 aaKnown RBP16.89■□□□□ 0.29
APOC1-208ENST00000592535 DHX36Q9H2U1 1008 aaKnown RBP16.89■□□□□ 0.29
APOC1-208ENST00000592535 PI4KBQ9UBF8 816 aa16.89■□□□□ 0.29
APOC1-208ENST00000592535 AFG3L2Q9Y4W6 797 aa16.89■□□□□ 0.29
APOC1-208ENST00000592535 MYH7P12883 1935 aa16.88■□□□□ 0.29
APOC1-208ENST00000592535 A0A0G2JLL6 359 aaPredicted RBP16.88■□□□□ 0.29
APOC1-208ENST00000592535 GOLIM4O00461 696 aa16.88■□□□□ 0.29
APOC1-208ENST00000592535 SMARCA5O60264 1052 aaPredicted RBP16.88■□□□□ 0.29
APOC1-208ENST00000592535 SOX10P56693 466 aa16.88■□□□□ 0.29
APOC1-208ENST00000592535 TTF1Q15361 905 aaPredicted RBP16.88■□□□□ 0.29
APOC1-208ENST00000592535 GPAT2Q6NUI2 795 aa16.88■□□□□ 0.29
APOC1-208ENST00000592535 PRRT2Q7Z6L0 340 aaPredicted RBP16.88■□□□□ 0.29
APOC1-208ENST00000592535 LRRCC1Q9C099 1032 aa16.88■□□□□ 0.29
APOC1-208ENST00000592535 EFCC1Q9HA90 598 aa16.88■□□□□ 0.29
APOC1-208ENST00000592535 SAP30BPQ9UHR5 308 aaKnown RBP16.88■□□□□ 0.29
APOC1-208ENST00000592535 HERC5Q9UII4 1024 aaKnown RBP16.88■□□□□ 0.29
APOC1-208ENST00000592535 PALD1Q9ULE6 856 aa16.88■□□□□ 0.29
APOC1-208ENST00000592535 NAV1Q8NEY1 1877 aa16.87■□□□□ 0.29
APOC1-208ENST00000592535 CAP2P40123 477 aa16.87■□□□□ 0.29
APOC1-208ENST00000592535 EDC3Q96F86 508 aaKnown RBP16.87■□□□□ 0.29
APOC1-208ENST00000592535 DNAJC18Q9H819 358 aa16.87■□□□□ 0.29
APOC1-208ENST00000592535 PTPN22Q9Y2R2 807 aa16.87■□□□□ 0.29
APOC1-208ENST00000592535 ADGRA2Q96PE1 1338 aa16.87■□□□□ 0.29
APOC1-208ENST00000592535 DDX60LQ5H9U9 1706 aaKnown RBP16.87■□□□□ 0.29
APOC1-208ENST00000592535 TRIM75PA6NK02 468 aa16.86■□□□□ 0.29
APOC1-208ENST00000592535 PDE6AP16499 860 aa16.86■□□□□ 0.29
APOC1-208ENST00000592535 RRP1P56182 461 aaKnown RBP16.86■□□□□ 0.29
APOC1-208ENST00000592535 SLC4A8Q2Y0W8 1093 aa16.86■□□□□ 0.29
APOC1-208ENST00000592535 TMED8Q6PL24 325 aaPredicted RBP16.86■□□□□ 0.29
APOC1-208ENST00000592535 C17orf99Q6UX52 265 aa16.86■□□□□ 0.29
APOC1-208ENST00000592535 GADL1Q6ZQY3 521 aa16.86■□□□□ 0.29
APOC1-208ENST00000592535 CERS3Q8IU89 383 aa16.86■□□□□ 0.29
APOC1-208ENST00000592535 BOLA2Q9H3K6 86 aa16.86■□□□□ 0.29
APOC1-208ENST00000592535 CPA4Q9UI42 421 aa16.86■□□□□ 0.29
APOC1-208ENST00000592535 LOC285556D6RIA3 1793 aa16.86■□□□□ 0.29
APOC1-208ENST00000592535 ATP5JP18859 108 aa16.85■□□□□ 0.29
APOC1-208ENST00000592535 USP5P45974 858 aa16.85■□□□□ 0.29
APOC1-208ENST00000592535 MLLT1Q03111 559 aaPredicted RBP16.85■□□□□ 0.29
APOC1-208ENST00000592535 SLC9C2Q5TAH2 1124 aa16.85■□□□□ 0.29
APOC1-208ENST00000592535 FASTKD5Q7L8L6 764 aaKnown RBP16.85■□□□□ 0.29
APOC1-208ENST00000592535 FOXP4Q8IVH2 680 aaPredicted RBP16.85■□□□□ 0.29
APOC1-208ENST00000592535 CRACR2BQ8N4Y2 399 aaPredicted RBP16.85■□□□□ 0.29
APOC1-208ENST00000592535 RIOK1Q9BRS2 568 aaKnown RBP16.85■□□□□ 0.29
APOC1-208ENST00000592535 ARHGAP39Q9C0H5 1083 aa16.85■□□□□ 0.29
APOC1-208ENST00000592535 DCTPP1Q9H773 170 aa16.85■□□□□ 0.29
APOC1-208ENST00000592535 MGAMO43451 1857 aa16.84■□□□□ 0.29
APOC1-208ENST00000592535 MAGEB6P1A0A0J9YX57 407 aa16.84■□□□□ 0.29
APOC1-208ENST00000592535 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
APOC1-208ENST00000592535 HLA-DOAP06340 250 aa16.84■□□□□ 0.29
APOC1-208ENST00000592535 CYP2C8P10632 490 aa16.84■□□□□ 0.29
APOC1-208ENST00000592535 JAG1P78504 1218 aa16.84■□□□□ 0.29
APOC1-208ENST00000592535 LACTBP83111 547 aaPredicted RBP16.84■□□□□ 0.29
APOC1-208ENST00000592535 SPP2Q13103 211 aa16.84■□□□□ 0.29
APOC1-208ENST00000592535 METTL16Q86W50 562 aaKnown RBP16.84■□□□□ 0.29
APOC1-208ENST00000592535 PARK7Q99497 189 aaKnown RBP16.84■□□□□ 0.29
APOC1-208ENST00000592535 TRIM34Q9BYJ4 488 aa16.84■□□□□ 0.29
APOC1-208ENST00000592535 PAG1Q9NWQ8 432 aa16.84■□□□□ 0.29
APOC1-208ENST00000592535 ZNF532Q9HCE3 1301 aa16.84■□□□□ 0.29
APOC1-208ENST00000592535 TCRBV5S4A2TA0A5A2 114 aa16.83■□□□□ 0.28
APOC1-208ENST00000592535 ARHGEF6Q15052 776 aa16.83■□□□□ 0.28
APOC1-208ENST00000592535 SHROOM1Q2M3G4 852 aaPredicted RBP16.83■□□□□ 0.28
APOC1-208ENST00000592535 HAUS7Q99871 368 aa16.83■□□□□ 0.28
APOC1-208ENST00000592535 PCDHB15Q9Y5E8 787 aa16.83■□□□□ 0.28
APOC1-208ENST00000592535 USP17L5A8MUK1 530 aa16.82■□□□□ 0.28
APOC1-208ENST00000592535 GDF11O95390 407 aa16.82■□□□□ 0.28
APOC1-208ENST00000592535 CTGFP29279 349 aa16.82■□□□□ 0.28
APOC1-208ENST00000592535 KIF22Q14807 665 aa16.82■□□□□ 0.28
APOC1-208ENST00000592535 SLFNL1Q499Z3 407 aa16.82■□□□□ 0.28
APOC1-208ENST00000592535 ZNF280CQ8ND82 737 aa16.82■□□□□ 0.28
APOC1-208ENST00000592535 TBC1D2Q9BYX2 928 aa16.82■□□□□ 0.28
APOC1-208ENST00000592535 SLC45A1Q9Y2W3 748 aa16.82■□□□□ 0.28
APOC1-208ENST00000592535 BCRP11274 1271 aa16.81■□□□□ 0.28
APOC1-208ENST00000592535 ADD2P35612 726 aa16.81■□□□□ 0.28
APOC1-208ENST00000592535 TREML2Q5T2D2 321 aa16.81■□□□□ 0.28
APOC1-208ENST00000592535 CRBNQ96SW2 442 aa16.81■□□□□ 0.28
APOC1-208ENST00000592535 AS3MTQ9HBK9 375 aa16.81■□□□□ 0.28
APOC1-208ENST00000592535 AGTPBP1Q9UPW5 1226 aa16.81■□□□□ 0.28
APOC1-208ENST00000592535 PTCH2Q9Y6C5 1203 aa16.81■□□□□ 0.28
APOC1-208ENST00000592535 BAZ2AQ9UIF9 1905 aaKnown RBP16.8■□□□□ 0.28
APOC1-208ENST00000592535 RBBP6Q7Z6E9 1792 aaKnown RBP16.8■□□□□ 0.28
APOC1-208ENST00000592535 CHGBP05060 677 aa16.8■□□□□ 0.28
APOC1-208ENST00000592535 ASNSP08243 561 aa16.8■□□□□ 0.28
APOC1-208ENST00000592535 HMGCS2P54868 508 aa16.8■□□□□ 0.28
APOC1-208ENST00000592535 TTC6Q86TZ1 520 aa16.8■□□□□ 0.28
APOC1-208ENST00000592535 LCORLQ8N3X6 602 aa16.8■□□□□ 0.28
APOC1-208ENST00000592535 PROCA1Q8NCQ7 364 aaPredicted RBP16.8■□□□□ 0.28
APOC1-208ENST00000592535 CRNKL1Q9BZJ0 848 aaKnown RBP16.8■□□□□ 0.28
APOC1-208ENST00000592535 EHD4Q9H223 541 aa16.8■□□□□ 0.28
APOC1-208ENST00000592535 ECHDC1Q9NTX5 307 aa16.8■□□□□ 0.28
APOC1-208ENST00000592535 ZBTB21Q9ULJ3 1066 aa16.8■□□□□ 0.28
APOC1-208ENST00000592535 MYH8P13535 1937 aa16.79■□□□□ 0.28
APOC1-208ENST00000592535 PSMC4P43686 418 aa16.79■□□□□ 0.28
APOC1-208ENST00000592535 SH3D19Q5HYK7 790 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms