RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 DPF2Q92785 391 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 STRN4Q9NRL3 753 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 SLAIN2Q9P270 581 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 FBXO2Q9UK22 296 aaPredicted RBP13.35□□□□□ -0.27
ZNF540-210ENST00000592533 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
ZNF540-210ENST00000592533 RASGRF1Q13972 1273 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 FBXO38Q6PIJ6 1188 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 TMEM139Q8IV31 216 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 TRIML1Q8N9V2 468 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 CNNM3Q8NE01 707 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 PCDHA5Q9Y5H7 936 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 MBD4O95243 580 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 ZNF18P17022 549 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 ELF2Q15723 593 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 TRIM65Q6PJ69 517 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 TMTC2Q8N394 836 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 SLC26A6Q9BXS9 759 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 ZBTB1Q9Y2K1 713 aa13.34□□□□□ -0.27
ZNF540-210ENST00000592533 CACNA1SQ13698 1873 aa13.33□□□□□ -0.27
ZNF540-210ENST00000592533 SYT10Q6XYQ8 523 aa13.33□□□□□ -0.27
ZNF540-210ENST00000592533 MAGEB6Q8N7X4 407 aa13.33□□□□□ -0.27
ZNF540-210ENST00000592533 SPATA20Q8TB22 786 aa13.33□□□□□ -0.27
ZNF540-210ENST00000592533 INTS13Q9NVM9 706 aa13.33□□□□□ -0.27
ZNF540-210ENST00000592533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.33□□□□□ -0.27
ZNF540-210ENST00000592533 DUOX1Q9NRD9 1551 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 SCN7AQ01118 1682 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 SERPINC1P01008 464 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 SAFBQ15424 915 aaKnown RBP eCLIP13.33□□□□□ -0.28
ZNF540-210ENST00000592533 CT47A1Q5JQC4 288 aaPredicted RBP13.33□□□□□ -0.28
ZNF540-210ENST00000592533 MFSD6Q6ZSS7 791 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 CCDC196A0A1B0GTZ2 297 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 DEXIO95424 95 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 CTDSPL2Q05D32 466 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 MORC3Q14149 939 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 REXO1L1PQ8IX06 675 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 TRIM22Q8IYM9 498 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 MLKLQ8NB16 471 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 MYL10Q9BUA6 226 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 SRRTQ9BXP5 876 aaKnown RBP13.33□□□□□ -0.28
ZNF540-210ENST00000592533 FANCLQ9NW38 375 aa13.33□□□□□ -0.28
ZNF540-210ENST00000592533 LAMB1P07942 1786 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 ARHGAP6O43182 974 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 SART3Q15020 963 aaKnown RBP13.32□□□□□ -0.28
ZNF540-210ENST00000592533 POSTNQ15063 836 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 RTN1Q16799 776 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 CFAP100Q494V2 611 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 DIS3L2Q8IYB7 885 aaKnown RBP13.32□□□□□ -0.28
ZNF540-210ENST00000592533 KRT222Q8N1A0 295 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 CRACR2BQ8N4Y2 399 aaPredicted RBP13.32□□□□□ -0.28
ZNF540-210ENST00000592533 ENOX1Q8TC92 643 aaKnown RBP13.32□□□□□ -0.28
ZNF540-210ENST00000592533 DACH1Q9UI36 760 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 MAN1B1Q9UKM7 699 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 SRPRBQ9Y5M8 271 aaKnown RBP13.32□□□□□ -0.28
ZNF540-210ENST00000592533 BTBD18B2RXH4 712 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 TOP1P11387 765 aaKnown RBP13.32□□□□□ -0.28
ZNF540-210ENST00000592533 PDE4BQ07343 736 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 ISM2Q6H9L7 571 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 KANK3Q6NY19 840 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 NACAP1Q9BZK3 213 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 INCENPQ9NQS7 918 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 ANAPC4Q9UJX5 808 aa13.32□□□□□ -0.28
ZNF540-210ENST00000592533 UBE2Q2LH0YL09 131 aa13.31□□□□□ -0.28
ZNF540-210ENST00000592533 GUCY1A2P33402 732 aa13.31□□□□□ -0.28
ZNF540-210ENST00000592533 DZIP3Q86Y13 1208 aaKnown RBP13.31□□□□□ -0.28
ZNF540-210ENST00000592533 ARMT1Q9H993 441 aa13.31□□□□□ -0.28
ZNF540-210ENST00000592533 MYH13Q9UKX3 1938 aa13.31□□□□□ -0.28
ZNF540-210ENST00000592533 ZSCAN12O43309 604 aa13.31□□□□□ -0.28
ZNF540-210ENST00000592533 FAM193AP78312 1265 aa13.31□□□□□ -0.28
ZNF540-210ENST00000592533 WTAPQ15007 396 aa13.31□□□□□ -0.28
ZNF540-210ENST00000592533 RNF41Q9H4P4 317 aaPredicted RBP13.31□□□□□ -0.28
ZNF540-210ENST00000592533 CEP131Q9UPN4 1083 aa13.31□□□□□ -0.28
ZNF540-210ENST00000592533 GOLGA6L9A6NEM1 432 aa13.3□□□□□ -0.28
ZNF540-210ENST00000592533 ACTN4O43707 911 aaKnown RBP13.3□□□□□ -0.28
ZNF540-210ENST00000592533 ROBO1Q9Y6N7 1651 aa13.3□□□□□ -0.28
ZNF540-210ENST00000592533 COL16A1Q07092 1604 aaPredicted RBP13.3□□□□□ -0.28
ZNF540-210ENST00000592533 TMEM232C9JQI7 657 aa13.3□□□□□ -0.28
ZNF540-210ENST00000592533 LCORLQ8N3X6 602 aa13.3□□□□□ -0.28
ZNF540-210ENST00000592533 ZNF446Q9NWS9 450 aa13.3□□□□□ -0.28
ZNF540-210ENST00000592533 BAZ2AQ9UIF9 1905 aaKnown RBP13.3□□□□□ -0.28
ZNF540-210ENST00000592533 STX10O60499 249 aa13.3□□□□□ -0.28
ZNF540-210ENST00000592533 ERCC5P28715 1186 aaPredicted RBP13.3□□□□□ -0.28
ZNF540-210ENST00000592533 RNF26Q9BY78 433 aaPredicted RBP13.3□□□□□ -0.28
ZNF540-210ENST00000592533 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.3□□□□□ -0.28
ZNF540-210ENST00000592533 DNAI1Q9UI46 699 aa13.3□□□□□ -0.28
ZNF540-210ENST00000592533 V9GYY5 206 aaPredicted RBP13.3□□□□□ -0.28
ZNF540-210ENST00000592533 MYH14Q7Z406 1995 aaKnown RBP13.29□□□□□ -0.28
ZNF540-210ENST00000592533 FANCGO15287 622 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 FOXN1O15353 648 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 EIF5P55010 431 aaKnown RBP13.29□□□□□ -0.28
ZNF540-210ENST00000592533 SEC23AQ15436 765 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 FANCBQ8NB91 859 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 ZNF831Q5JPB2 1677 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 COL5A3P25940 1745 aaPredicted RBP13.29□□□□□ -0.28
ZNF540-210ENST00000592533 VWA3AA6NCI4 1184 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 GRIN1Q05586 938 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 SPECC1LQ69YQ0 1117 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 ZNF654Q8IZM8 581 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 HELBQ8NG08 1087 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms