RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 INPP5BP32019 993 aa22.46■■□□□ 1.19
TCF3-216ENST00000592395 MKRN3Q13064 507 aaKnown RBP22.46■■□□□ 1.19
TCF3-216ENST00000592395 ZKSCAN4Q969J2 545 aaPredicted RBP22.46■■□□□ 1.19
TCF3-216ENST00000592395 FSD1Q9BTV5 496 aa22.46■■□□□ 1.19
TCF3-216ENST00000592395 OSBPL3Q9H4L5 887 aa22.46■■□□□ 1.19
TCF3-216ENST00000592395 PCNTO95613 3336 aa22.46■■□□□ 1.19
TCF3-216ENST00000592395 PHF20L1A8MW92 1017 aa22.45■■□□□ 1.18
TCF3-216ENST00000592395 RNF113AO15541 343 aaKnown RBP22.45■■□□□ 1.18
TCF3-216ENST00000592395 MBD4O95243 580 aa22.45■■□□□ 1.18
TCF3-216ENST00000592395 PLEKHM2Q8IWE5 1019 aa22.45■■□□□ 1.18
TCF3-216ENST00000592395 APPBP2Q92624 585 aa22.45■■□□□ 1.18
TCF3-216ENST00000592395 OPTNQ96CV9 577 aa22.45■■□□□ 1.18
TCF3-216ENST00000592395 ARMT1Q9H993 441 aa22.45■■□□□ 1.18
TCF3-216ENST00000592395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.45■■□□□ 1.186e-6■■■□□ 15.9
TCF3-216ENST00000592395 SAP30BPQ9UHR5 308 aaKnown RBP22.45■■□□□ 1.18
TCF3-216ENST00000592395 HERC5Q9UII4 1024 aaKnown RBP22.45■■□□□ 1.18
TCF3-216ENST00000592395 SNCAIPQ9Y6H5 919 aa22.45■■□□□ 1.18
TCF3-216ENST00000592395 SPDYE5A6NIY4 337 aa22.44■■□□□ 1.18
TCF3-216ENST00000592395 HLA-DOAP06340 250 aa22.44■■□□□ 1.18
TCF3-216ENST00000592395 DOCK1Q14185 1865 aa22.44■■□□□ 1.18
TCF3-216ENST00000592395 NOL9Q5SY16 702 aaKnown RBP22.44■■□□□ 1.18
TCF3-216ENST00000592395 EVI5LQ96CN4 794 aa22.44■■□□□ 1.18
TCF3-216ENST00000592395 PUS7LQ9H0K6 701 aaKnown RBP22.44■■□□□ 1.18
TCF3-216ENST00000592395 PALD1Q9ULE6 856 aa22.44■■□□□ 1.18
TCF3-216ENST00000592395 GJA5P36382 358 aa22.43■■□□□ 1.18
TCF3-216ENST00000592395 SREBF2Q12772 1141 aa22.43■■□□□ 1.18
TCF3-216ENST00000592395 ERO1BQ86YB8 467 aa22.43■■□□□ 1.18
TCF3-216ENST00000592395 MANSC4A6NHS7 340 aaPredicted RBP22.42■■□□□ 1.18
TCF3-216ENST00000592395 CA12O43570 354 aa22.42■■□□□ 1.18
TCF3-216ENST00000592395 NEFLP07196 543 aa22.42■■□□□ 1.18
TCF3-216ENST00000592395 SLURP2P0DP57 97 aa22.42■■□□□ 1.18
TCF3-216ENST00000592395 METTL16Q86W50 562 aaKnown RBP22.42■■□□□ 1.18
TCF3-216ENST00000592395 FOXP4Q8IVH2 680 aaPredicted RBP22.42■■□□□ 1.18
TCF3-216ENST00000592395 SDR42E1Q8WUS8 393 aa22.42■■□□□ 1.18
TCF3-216ENST00000592395 OTUD5Q96G74 571 aa22.42■■□□□ 1.18
TCF3-216ENST00000592395 ATAD5Q96QE3 1844 aa22.41■■□□□ 1.18
TCF3-216ENST00000592395 FAM196BA6NMK8 535 aa22.41■■□□□ 1.18
TCF3-216ENST00000592395 FOXN1O15353 648 aa22.41■■□□□ 1.18
TCF3-216ENST00000592395 CTNND1O60716 968 aaKnown RBP22.41■■□□□ 1.18
TCF3-216ENST00000592395 TM4SF4P48230 202 aa22.41■■□□□ 1.18
TCF3-216ENST00000592395 TTC6Q86TZ1 520 aa22.41■■□□□ 1.18
TCF3-216ENST00000592395 SCYL3Q8IZE3 742 aa22.41■■□□□ 1.18
TCF3-216ENST00000592395 CRACR2BQ8N4Y2 399 aaPredicted RBP22.41■■□□□ 1.18
TCF3-216ENST00000592395 OSBP2Q969R2 916 aa22.41■■□□□ 1.18
TCF3-216ENST00000592395 DCP1AQ9NPI6 582 aaPredicted RBP22.41■■□□□ 1.18
TCF3-216ENST00000592395 ATP8A2Q9NTI2 1148 aa22.41■■□□□ 1.18
TCF3-216ENST00000592395 INHBEP58166 350 aa22.4■■□□□ 1.18
TCF3-216ENST00000592395 TICAM2Q86XR7 235 aa22.4■■□□□ 1.18
TCF3-216ENST00000592395 TRIM34Q9BYJ4 488 aa22.4■■□□□ 1.18
TCF3-216ENST00000592395 BAZ2AQ9UIF9 1905 aaKnown RBP22.39■■□□□ 1.18
TCF3-216ENST00000592395 TRIM6-TRIM34B2RNG4 842 aa22.39■■□□□ 1.17
TCF3-216ENST00000592395 PRKAB2O43741 272 aa22.39■■□□□ 1.17
TCF3-216ENST00000592395 POLR3DP05423 398 aaPredicted RBP22.39■■□□□ 1.17
TCF3-216ENST00000592395 PDE4AP27815 886 aa22.39■■□□□ 1.17
TCF3-216ENST00000592395 CTCFP49711 727 aaPredicted RBP22.39■■□□□ 1.17
TCF3-216ENST00000592395 PPATQ06203 517 aa22.39■■□□□ 1.17
TCF3-216ENST00000592395 PPIL2Q13356 520 aa22.39■■□□□ 1.17
TCF3-216ENST00000592395 SLC4A8Q2Y0W8 1093 aa22.39■■□□□ 1.17
TCF3-216ENST00000592395 STRBPQ96SI9 672 aaKnown RBP22.39■■□□□ 1.17
TCF3-216ENST00000592395 EHD4Q9H223 541 aa22.39■■□□□ 1.17
TCF3-216ENST00000592395 PICK1Q9NRD5 415 aa22.39■■□□□ 1.17
TCF3-216ENST00000592395 MCM9Q9NXL9 1143 aa22.39■■□□□ 1.17
TCF3-216ENST00000592395 SLC4A4Q9Y6R1 1079 aa22.39■■□□□ 1.17
TCF3-216ENST00000592395 GTF2A2P52657 109 aa22.38■■□□□ 1.17
TCF3-216ENST00000592395 DDRGK1Q96HY6 314 aa22.38■■□□□ 1.17
TCF3-216ENST00000592395 DNAJC18Q9H819 358 aa22.38■■□□□ 1.17
TCF3-216ENST00000592395 SAGE1Q9NXZ1 904 aa22.38■■□□□ 1.17
TCF3-216ENST00000592395 SERPINB13Q9UIV8 391 aa22.38■■□□□ 1.17
TCF3-216ENST00000592395 M0R2C6 588 aa22.37■■□□□ 1.17
TCF3-216ENST00000592395 GPAA1O43292 621 aa22.37■■□□□ 1.17
TCF3-216ENST00000592395 ZMYM1Q5SVZ6 1142 aa22.37■■□□□ 1.17
TCF3-216ENST00000592395 MS4A4AQ96JQ5 239 aa22.37■■□□□ 1.17
TCF3-216ENST00000592395 RNF186Q9NXI6 227 aa22.37■■□□□ 1.17
TCF3-216ENST00000592395 PHIPQ8WWQ0 1821 aa22.36■■□□□ 1.17
TCF3-216ENST00000592395 TESPA1A2RU30 521 aaPredicted RBP22.36■■□□□ 1.17
TCF3-216ENST00000592395 IRF6O14896 467 aa22.36■■□□□ 1.17
TCF3-216ENST00000592395 PTPRAP18433 802 aa22.36■■□□□ 1.17
TCF3-216ENST00000592395 GNAT2P19087 354 aa22.36■■□□□ 1.17
TCF3-216ENST00000592395 CAP2P40123 477 aa22.36■■□□□ 1.17
TCF3-216ENST00000592395 PLCD1P51178 756 aa22.36■■□□□ 1.17
TCF3-216ENST00000592395 CENPQQ7L2Z9 268 aaPredicted RBP22.36■■□□□ 1.17
TCF3-216ENST00000592395 RILPL2Q969X0 211 aa22.36■■□□□ 1.17
TCF3-216ENST00000592395 HSPA8P11142 646 aaKnown RBP22.35■■□□□ 1.17
TCF3-216ENST00000592395 SNAPC2Q13487 334 aa22.35■■□□□ 1.17
TCF3-216ENST00000592395 AMOTL1Q8IY63 956 aa22.35■■□□□ 1.17
TCF3-216ENST00000592395 SEC62Q99442 399 aaKnown RBP22.35■■□□□ 1.17
TCF3-216ENST00000592395 TRPA1O75762 1119 aa22.34■■□□□ 1.17
TCF3-216ENST00000592395 ALDH1A1P00352 501 aa22.34■■□□□ 1.17
TCF3-216ENST00000592395 RRP1BQ14684 758 aaKnown RBP22.34■■□□□ 1.17
TCF3-216ENST00000592395 GIMAP6Q6P9H5 292 aa22.34■■□□□ 1.17
TCF3-216ENST00000592395 IFNL1Q8IU54 200 aa22.34■■□□□ 1.17
TCF3-216ENST00000592395 TAOK2Q9UL54 1235 aa22.34■■□□□ 1.17
TCF3-216ENST00000592395 KCNH4Q9UQ05 1017 aa22.34■■□□□ 1.17
TCF3-216ENST00000592395 MYH8P13535 1937 aa22.33■■□□□ 1.17
TCF3-216ENST00000592395 CCL15-CCL14A0A0B4J2E2 113 aa22.33■■□□□ 1.17
TCF3-216ENST00000592395 CETPP11597 493 aa22.33■■□□□ 1.17
TCF3-216ENST00000592395 GABPAQ06546 454 aa22.33■■□□□ 1.17
TCF3-216ENST00000592395 CCL15Q16663 113 aa22.33■■□□□ 1.17
TCF3-216ENST00000592395 OTUD7BQ6GQQ9 843 aa22.33■■□□□ 1.17
TCF3-216ENST00000592395 TATDN1Q6P1N9 297 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms