RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 ADALQ6DHV7 355 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 FAM173BQ6P4H8 233 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 DGKHQ86XP1 1220 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 ZNF654Q8IZM8 581 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 BICD2Q8TD16 824 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 ANKS1AQ92625 1134 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 TRIM44Q96DX7 344 aaPredicted RBP12.06□□□□□ -0.48
VPS25-206ENST00000591584 RNF26Q9BY78 433 aaPredicted RBP12.06□□□□□ -0.48
VPS25-206ENST00000591584 ZC3H12CQ9C0D7 883 aaKnown RBP12.06□□□□□ -0.48
VPS25-206ENST00000591584 RBSNQ9H1K0 784 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 FAM217BQ9NTX9 383 aaPredicted RBP12.06□□□□□ -0.48
VPS25-206ENST00000591584 TCP11L1Q9NUJ3 509 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 TACC3Q9Y6A5 838 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 BRWD3Q6RI45 1802 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 MROH7-TTC4A0A0A0MT08 1334 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 TNKSO95271 1327 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 MYO5AQ9Y4I1 1855 aaKnown RBP12.06□□□□□ -0.48
VPS25-206ENST00000591584 CASZ1Q86V15 1759 aa12.05□□□□□ -0.48
VPS25-206ENST00000591584 C6orf229H3BNL8 230 aa12.05□□□□□ -0.48
VPS25-206ENST00000591584 U2AF2P26368 475 aaKnown RBP eCLIP12.05□□□□□ -0.484e-8■□□□□ 9.6
VPS25-206ENST00000591584 CDC27P30260 824 aa12.05□□□□□ -0.48
VPS25-206ENST00000591584 KIF23Q02241 960 aaPredicted RBP12.05□□□□□ -0.48
VPS25-206ENST00000591584 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
VPS25-206ENST00000591584 SF3A1Q15459 793 aaKnown RBP12.05□□□□□ -0.48
VPS25-206ENST00000591584 C12orf60Q5U649 245 aa12.05□□□□□ -0.48
VPS25-206ENST00000591584 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
VPS25-206ENST00000591584 KRT40Q6A162 431 aa12.05□□□□□ -0.48
VPS25-206ENST00000591584 RBM43Q6ZSC3 357 aaKnown RBP12.05□□□□□ -0.48
VPS25-206ENST00000591584 CRACR2BQ8N4Y2 399 aaPredicted RBP12.05□□□□□ -0.48
VPS25-206ENST00000591584 MPNDQ8N594 471 aa12.05□□□□□ -0.48
VPS25-206ENST00000591584 INCENPQ9NQS7 918 aa12.05□□□□□ -0.48
VPS25-206ENST00000591584 POLLQ9UGP5 575 aa12.05□□□□□ -0.48
VPS25-206ENST00000591584 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
VPS25-206ENST00000591584 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
VPS25-206ENST00000591584 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
VPS25-206ENST00000591584 PRPF3O43395 683 aaKnown RBP12.04□□□□□ -0.48
VPS25-206ENST00000591584 PPP6R2O75170 966 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 KIF5BP33176 963 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 GNAQP50148 359 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 FKBP1AP62942 108 aaKnown RBP12.04□□□□□ -0.48
VPS25-206ENST00000591584 STK38Q15208 465 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 CC2D2BQ6DHV5 1058 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 STYK1Q6J9G0 422 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 CCDC73Q6ZRK6 1079 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 FAM177A1Q8N128 213 aaPredicted RBP12.04□□□□□ -0.48
VPS25-206ENST00000591584 LINC00301Q8NCQ3 95 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 PGBD1Q96JS3 809 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 USP28Q96RU2 1077 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 MRIQ9BWK5 157 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 SLC26A6Q9BXS9 759 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 TNMDQ9H2S6 317 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 FOXP1Q9H334 677 aaPredicted RBP12.04□□□□□ -0.48
VPS25-206ENST00000591584 CLSTN2Q9H4D0 955 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 MCM9Q9NXL9 1143 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 GAKO14976 1311 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 TAF1P21675 1872 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 ROBO3Q96MS0 1386 aa12.04□□□□□ -0.48
VPS25-206ENST00000591584 SPTLC2O15270 562 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 MMP10P09238 476 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 MFSD14BQ5SR56 506 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 ANO1Q5XXA6 986 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 CCAR1Q8IX12 1150 aaKnown RBP12.03□□□□□ -0.48
VPS25-206ENST00000591584 ZNF444Q8N0Y2 327 aaPredicted RBP12.03□□□□□ -0.48
VPS25-206ENST00000591584 FAM43AQ8N2R8 423 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 ENAHQ8N8S7 591 aaPredicted RBP12.03□□□□□ -0.48
VPS25-206ENST00000591584 CTCFLQ8NI51 663 aaPredicted RBP12.03□□□□□ -0.48
VPS25-206ENST00000591584 NUP133Q8WUM0 1156 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 CNKSR1Q969H4 720 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 FUCA2Q9BTY2 467 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 RTFDC1Q9BY42 306 aaPredicted RBP12.03□□□□□ -0.48
VPS25-206ENST00000591584 PANK2Q9BZ23 570 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 SENP2Q9HC62 589 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 DACT1Q9NYF0 836 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 MORC2Q9Y6X9 1032 aaPredicted RBP12.03□□□□□ -0.48
VPS25-206ENST00000591584 KIAA1551Q9HCM1 1747 aa12.03□□□□□ -0.48
VPS25-206ENST00000591584 TSPY2A6NKD2 308 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 H0YIN7 160 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 DTNBO60941 627 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 POLR3DP05423 398 aaPredicted RBP12.02□□□□□ -0.49
VPS25-206ENST00000591584 BTDP43251 543 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 ME1P48163 572 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 GUCY1B3Q02153 619 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 FAM160A1Q05DH4 1040 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 TROAPQ12815 778 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 SLC39A14Q15043 492 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 RILPL1Q5EBL4 403 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 SASS6Q6UVJ0 657 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 DPP8Q6V1X1 898 aaPredicted RBP12.02□□□□□ -0.49
VPS25-206ENST00000591584 ILDR1Q86SU0 546 aaPredicted RBP12.02□□□□□ -0.49
VPS25-206ENST00000591584 NBPF11Q86T75 865 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 NKX2-3Q8TAU0 364 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 MRPS27Q92552 414 aaKnown RBP12.02□□□□□ -0.49
VPS25-206ENST00000591584 PDLIM2Q96JY6 352 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 LZTS2Q9BRK4 669 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 ZKSCAN3Q9BRR0 538 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.02□□□□□ -0.49
VPS25-206ENST00000591584 MKNK2Q9HBH9 465 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 BRMS1Q9HCU9 246 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms