RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-212ENST00000591107 ENTPD3O75355 529 aa16.36■□□□□ 0.21
NPC1-212ENST00000591107 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
NPC1-212ENST00000591107 BCRP11274 1271 aa16.36■□□□□ 0.21
NPC1-212ENST00000591107 RHBDL3P58872 404 aa16.36■□□□□ 0.21
NPC1-212ENST00000591107 PRRT2Q7Z6L0 340 aaPredicted RBP16.36■□□□□ 0.21
NPC1-212ENST00000591107 RAET1EQ8TD07 263 aa16.36■□□□□ 0.21
NPC1-212ENST00000591107 PICK1Q9NRD5 415 aa16.36■□□□□ 0.21
NPC1-212ENST00000591107 HMG20BQ9P0W2 317 aa16.36■□□□□ 0.21
NPC1-212ENST00000591107 ERICH6Q7L0X2 663 aa16.35■□□□□ 0.21
NPC1-212ENST00000591107 ZGPATQ8N5A5 531 aaKnown RBP16.35■□□□□ 0.21
NPC1-212ENST00000591107 LOC285556D6RIA3 1793 aa16.34■□□□□ 0.21
NPC1-212ENST00000591107 MYO5AQ9Y4I1 1855 aaKnown RBP16.34■□□□□ 0.21
NPC1-212ENST00000591107 H0YGN5 161 aa16.34■□□□□ 0.21
NPC1-212ENST00000591107 GRK4P32298 578 aa16.34■□□□□ 0.21
NPC1-212ENST00000591107 MCAMP43121 646 aa16.34■□□□□ 0.21
NPC1-212ENST00000591107 RRP1BQ14684 758 aaKnown RBP16.34■□□□□ 0.21
NPC1-212ENST00000591107 MVPQ14764 893 aaKnown RBP16.34■□□□□ 0.21
NPC1-212ENST00000591107 TREML2Q5T2D2 321 aa16.34■□□□□ 0.21
NPC1-212ENST00000591107 GCC1Q96CN9 775 aa16.34■□□□□ 0.21
NPC1-212ENST00000591107 C1orf115Q9H7X2 142 aa16.34■□□□□ 0.21
NPC1-212ENST00000591107 SNRKQ9NRH2 765 aa16.34■□□□□ 0.21
NPC1-212ENST00000591107 COLQQ9Y215 455 aaPredicted RBP16.34■□□□□ 0.21
NPC1-212ENST00000591107 AFG3L2Q9Y4W6 797 aa16.34■□□□□ 0.21
NPC1-212ENST00000591107 PDS5AQ29RF7 1337 aaKnown RBP16.34■□□□□ 0.21
NPC1-212ENST00000591107 CXCL11O14625 94 aa16.33■□□□□ 0.2
NPC1-212ENST00000591107 GNAI3P08754 354 aa16.33■□□□□ 0.2
NPC1-212ENST00000591107 CCL5P13501 91 aa16.33■□□□□ 0.2
NPC1-212ENST00000591107 ELNP15502 786 aa16.33■□□□□ 0.2
NPC1-212ENST00000591107 PDAP1Q13442 181 aaKnown RBP16.33■□□□□ 0.2
NPC1-212ENST00000591107 MTX1Q13505 466 aa16.33■□□□□ 0.2
NPC1-212ENST00000591107 SPATA5Q8NB90 893 aa16.33■□□□□ 0.2
NPC1-212ENST00000591107 RAI14Q9P0K7 980 aa16.33■□□□□ 0.2
NPC1-212ENST00000591107 PCDH10Q9P2E7 1040 aa16.33■□□□□ 0.2
NPC1-212ENST00000591107 BIN2Q9UBW5 565 aaPredicted RBP16.33■□□□□ 0.2
NPC1-212ENST00000591107 PCDHB8Q9UN66 801 aa16.33■□□□□ 0.2
NPC1-212ENST00000591107 PCDHB13Q9Y5F0 798 aa16.33■□□□□ 0.2
NPC1-212ENST00000591107 CDK5RAP2Q96SN8 1893 aa16.33■□□□□ 0.2
NPC1-212ENST00000591107 CEP290O15078 2479 aa16.33■□□□□ 0.2
NPC1-212ENST00000591107 GPR75-ASB3A0A0A6YYF3 556 aa16.32■□□□□ 0.2
NPC1-212ENST00000591107 GTPBP6O43824 516 aaPredicted RBP16.32■□□□□ 0.2
NPC1-212ENST00000591107 GNRH1P01148 92 aa16.32■□□□□ 0.2
NPC1-212ENST00000591107 FXR1P51114 621 aaKnown RBP eCLIP16.32■□□□□ 0.2
NPC1-212ENST00000591107 FCGRTP55899 365 aa16.32■□□□□ 0.2
NPC1-212ENST00000591107 SHROOM1Q2M3G4 852 aaPredicted RBP16.32■□□□□ 0.2
NPC1-212ENST00000591107 GORABQ5T7V8 394 aa16.32■□□□□ 0.2
NPC1-212ENST00000591107 TMEM57Q8N5G2 664 aa16.32■□□□□ 0.2
NPC1-212ENST00000591107 ZNF579Q8NAF0 562 aaKnown RBP16.32■□□□□ 0.2
NPC1-212ENST00000591107 NSUN4Q96CB9 384 aaKnown RBP16.32■□□□□ 0.2
NPC1-212ENST00000591107 UNC93B1Q9H1C4 597 aa16.32■□□□□ 0.2
NPC1-212ENST00000591107 PRMT2P55345 433 aa16.31■□□□□ 0.2
NPC1-212ENST00000591107 EVX2Q03828 476 aa16.31■□□□□ 0.2
NPC1-212ENST00000591107 SPTY2D1Q68D10 685 aaPredicted RBP16.31■□□□□ 0.2
NPC1-212ENST00000591107 ANKRD13CQ8N6S4 541 aa16.31■□□□□ 0.2
NPC1-212ENST00000591107 SH3RF3Q8TEJ3 882 aaPredicted RBP16.31■□□□□ 0.2
NPC1-212ENST00000591107 SMCR8Q8TEV9 937 aaPredicted RBP16.31■□□□□ 0.2
NPC1-212ENST00000591107 RNF208Q9H0X6 261 aa16.31■□□□□ 0.2
NPC1-212ENST00000591107 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.31■□□□□ 0.2
NPC1-212ENST00000591107 AKAP2Q9Y2D5 859 aa16.31■□□□□ 0.2
NPC1-212ENST00000591107 PEX10O60683 326 aa16.3■□□□□ 0.2
NPC1-212ENST00000591107 GNAI2P04899 355 aa16.3■□□□□ 0.2
NPC1-212ENST00000591107 ARID4AP29374 1257 aaPredicted RBP16.3■□□□□ 0.2
NPC1-212ENST00000591107 FLT3LGP49771 235 aa16.3■□□□□ 0.2
NPC1-212ENST00000591107 ATF7IPQ6VMQ6 1270 aa16.3■□□□□ 0.2
NPC1-212ENST00000591107 ADGRA1Q86SQ6 560 aa16.3■□□□□ 0.2
NPC1-212ENST00000591107 SLF2Q8IX21 1173 aa16.3■□□□□ 0.2
NPC1-212ENST00000591107 ARHGAP45Q92619 1136 aa16.3■□□□□ 0.2
NPC1-212ENST00000591107 FAM163AQ96GL9 167 aaPredicted RBP16.3■□□□□ 0.2
NPC1-212ENST00000591107 DBNDD2Q9BQY9 259 aa16.3■□□□□ 0.2
NPC1-212ENST00000591107 OSBPL5Q9H0X9 879 aaPredicted RBP16.3■□□□□ 0.2
NPC1-212ENST00000591107 HDAC5Q9UQL6 1122 aa16.3■□□□□ 0.2
NPC1-212ENST00000591107 TRIOBPQ9H2D6 2365 aa16.29■□□□□ 0.2
NPC1-212ENST00000591107 TNPO2O14787 897 aaKnown RBP16.29■□□□□ 0.2
NPC1-212ENST00000591107 CTNND1O60716 968 aaKnown RBP16.29■□□□□ 0.2
NPC1-212ENST00000591107 INHAP05111 366 aa16.29■□□□□ 0.2
NPC1-212ENST00000591107 HOXD10P28358 340 aa16.29■□□□□ 0.2
NPC1-212ENST00000591107 HMGCS2P54868 508 aa16.29■□□□□ 0.2
NPC1-212ENST00000591107 MAP3K10Q02779 954 aa16.29■□□□□ 0.2
NPC1-212ENST00000591107 FASTKD5Q7L8L6 764 aaKnown RBP16.29■□□□□ 0.2
NPC1-212ENST00000591107 TEX11Q8IYF3 940 aa16.29■□□□□ 0.2
NPC1-212ENST00000591107 AATFQ9NY61 560 aaKnown RBP eCLIP16.29■□□□□ 0.2
NPC1-212ENST00000591107 TLR7Q9NYK1 1049 aaKnown RBP16.29■□□□□ 0.2
NPC1-212ENST00000591107 AGTPBP1Q9UPW5 1226 aa16.29■□□□□ 0.2
NPC1-212ENST00000591107 ADCY3O60266 1144 aa16.28■□□□□ 0.2
NPC1-212ENST00000591107 JAG1P78504 1218 aa16.28■□□□□ 0.2
NPC1-212ENST00000591107 SPP2Q13103 211 aa16.28■□□□□ 0.2
NPC1-212ENST00000591107 G3BP1Q13283 466 aaKnown RBP eCLIP16.28■□□□□ 0.2
NPC1-212ENST00000591107 DPF3Q92784 378 aa16.28■□□□□ 0.2
NPC1-212ENST00000591107 RYDENQ9NUL5 291 aaKnown RBP16.28■□□□□ 0.2
NPC1-212ENST00000591107 LRP2BPQ9P2M1 347 aa16.28■□□□□ 0.2
NPC1-212ENST00000591107 FOCADQ5VW36 1801 aa16.28■□□□□ 0.2
NPC1-212ENST00000591107 DOCK3Q8IZD9 2030 aa16.28■□□□□ 0.2
NPC1-212ENST00000591107 GJA8P48165 433 aa16.27■□□□□ 0.2
NPC1-212ENST00000591107 TNNI3KQ59H18 835 aa16.27■□□□□ 0.2
NPC1-212ENST00000591107 TTC39AQ5SRH9 613 aa16.27■□□□□ 0.2
NPC1-212ENST00000591107 MAPKAPK5Q8IW41 473 aa16.27■□□□□ 0.2
NPC1-212ENST00000591107 SLAIN1Q8ND83 568 aa16.27■□□□□ 0.2
NPC1-212ENST00000591107 U2AF1L4Q8WU68 220 aaKnown RBP16.27■□□□□ 0.2
NPC1-212ENST00000591107 DNAJC18Q9H819 358 aa16.27■□□□□ 0.2
NPC1-212ENST00000591107 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.2
NPC1-212ENST00000591107 FPGT-TNNI3KV9GXZ4 949 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms