RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 MECOMQ03112 1051 aa18.68■□□□□ 0.58
GHDC-211ENST00000590520 PABPC4Q13310 644 aaKnown RBP eCLIP18.68■□□□□ 0.58
GHDC-211ENST00000590520 API5Q9BZZ5 524 aaKnown RBP18.68■□□□□ 0.58
GHDC-211ENST00000590520 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.68■□□□□ 0.58
GHDC-211ENST00000590520 AKAP2Q9Y2D5 859 aa18.68■□□□□ 0.58
GHDC-211ENST00000590520 PLXNB2O15031 1838 aa18.67■□□□□ 0.58
GHDC-211ENST00000590520 ZNF316A6NFI3 1004 aaPredicted RBP18.67■□□□□ 0.58
GHDC-211ENST00000590520 NECAB2Q7Z6G3 386 aa18.67■□□□□ 0.58
GHDC-211ENST00000590520 ANKLE1Q8NAG6 615 aa18.67■□□□□ 0.58
GHDC-211ENST00000590520 PAWRQ96IZ0 340 aaKnown RBP18.67■□□□□ 0.58
GHDC-211ENST00000590520 SIPA1L1O43166 1804 aa18.67■□□□□ 0.58
GHDC-211ENST00000590520 FAM196BA6NMK8 535 aa18.66■□□□□ 0.58
GHDC-211ENST00000590520 CT47B1P0C2W7 299 aaPredicted RBP18.66■□□□□ 0.58
GHDC-211ENST00000590520 TIMM10P62072 90 aa18.66■□□□□ 0.58
GHDC-211ENST00000590520 GSTO1P78417 241 aa18.66■□□□□ 0.58
GHDC-211ENST00000590520 ZNF280CQ8ND82 737 aa18.66■□□□□ 0.58
GHDC-211ENST00000590520 DIS3LQ8TF46 1054 aaKnown RBP18.66■□□□□ 0.58
GHDC-211ENST00000590520 XAGE2Q96GT9 111 aa18.66■□□□□ 0.58
GHDC-211ENST00000590520 MEIS3Q99687 375 aa18.66■□□□□ 0.58
GHDC-211ENST00000590520 CUL9Q8IWT3 2517 aa18.66■□□□□ 0.58
GHDC-211ENST00000590520 A0A0C4DFX4 3053 aa18.65■□□□□ 0.58
GHDC-211ENST00000590520 SOX1O00570 391 aaPredicted RBP18.65■□□□□ 0.58
GHDC-211ENST00000590520 HMGCS2P54868 508 aa18.65■□□□□ 0.58
GHDC-211ENST00000590520 SPP2Q13103 211 aa18.65■□□□□ 0.58
GHDC-211ENST00000590520 ZNF384Q8TF68 577 aa18.65■□□□□ 0.58
GHDC-211ENST00000590520 NOB1Q9ULX3 412 aaKnown RBP18.65■□□□□ 0.58
GHDC-211ENST00000590520 FOCADQ5VW36 1801 aa18.65■□□□□ 0.58
GHDC-211ENST00000590520 CDK5RAP2Q96SN8 1893 aa18.65■□□□□ 0.58
GHDC-211ENST00000590520 LDHCP07864 332 aa18.64■□□□□ 0.57
GHDC-211ENST00000590520 TFCP2Q12800 502 aa18.64■□□□□ 0.57
GHDC-211ENST00000590520 NSUN4Q96CB9 384 aaKnown RBP18.64■□□□□ 0.57
GHDC-211ENST00000590520 AS3MTQ9HBK9 375 aa18.64■□□□□ 0.57
GHDC-211ENST00000590520 STAP2Q9UGK3 403 aa18.64■□□□□ 0.57
GHDC-211ENST00000590520 SRGAP3O43295 1099 aa18.63■□□□□ 0.57
GHDC-211ENST00000590520 CAP2P40123 477 aa18.63■□□□□ 0.57
GHDC-211ENST00000590520 C7orf61Q8IZ16 206 aa18.63■□□□□ 0.57
GHDC-211ENST00000590520 SLC17A8Q8NDX2 589 aa18.63■□□□□ 0.57
GHDC-211ENST00000590520 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
GHDC-211ENST00000590520 LRCH3Q96II8 777 aa18.63■□□□□ 0.57
GHDC-211ENST00000590520 ASCC2Q9H1I8 757 aaPredicted RBP18.63■□□□□ 0.57
GHDC-211ENST00000590520 HMG20BQ9P0W2 317 aa18.63■□□□□ 0.57
GHDC-211ENST00000590520 HERC5Q9UII4 1024 aaKnown RBP18.63■□□□□ 0.57
GHDC-211ENST00000590520 RPTORQ8N122 1335 aa18.63■□□□□ 0.57
GHDC-211ENST00000590520 USP17L5A8MUK1 530 aa18.62■□□□□ 0.57
GHDC-211ENST00000590520 MTX1Q13505 466 aa18.62■□□□□ 0.57
GHDC-211ENST00000590520 SH3D19Q5HYK7 790 aa18.62■□□□□ 0.57
GHDC-211ENST00000590520 TEX11Q8IYF3 940 aa18.62■□□□□ 0.57
GHDC-211ENST00000590520 SPATA5Q8NB90 893 aa18.62■□□□□ 0.57
GHDC-211ENST00000590520 GDF15Q99988 308 aa18.62■□□□□ 0.57
GHDC-211ENST00000590520 HMX1Q9NP08 348 aaPredicted RBP18.62■□□□□ 0.57
GHDC-211ENST00000590520 MORF4L1Q9UBU8 362 aa18.62■□□□□ 0.57
GHDC-211ENST00000590520 GNAI3P08754 354 aa18.61■□□□□ 0.57
GHDC-211ENST00000590520 ARID4AP29374 1257 aaPredicted RBP18.61■□□□□ 0.57
GHDC-211ENST00000590520 BMP8BP34820 402 aa18.61■□□□□ 0.57
GHDC-211ENST00000590520 GORABQ5T7V8 394 aa18.61■□□□□ 0.57
GHDC-211ENST00000590520 PI16Q6UXB8 463 aa18.61■□□□□ 0.57
GHDC-211ENST00000590520 NEUROD6Q96NK8 337 aa18.61■□□□□ 0.57
GHDC-211ENST00000590520 NBPF3Q9H094 633 aa18.61■□□□□ 0.57
GHDC-211ENST00000590520 RAI14Q9P0K7 980 aa18.61■□□□□ 0.57
GHDC-211ENST00000590520 GJD2Q9UKL4 321 aa18.61■□□□□ 0.57
GHDC-211ENST00000590520 IRX3P78415 501 aaPredicted RBP18.6■□□□□ 0.57
GHDC-211ENST00000590520 RRP1BQ14684 758 aaKnown RBP18.6■□□□□ 0.57
GHDC-211ENST00000590520 TRMT2AQ8IZ69 625 aaKnown RBP18.6■□□□□ 0.57
GHDC-211ENST00000590520 SOCS4Q8WXH5 440 aa18.6■□□□□ 0.57
GHDC-211ENST00000590520 TRIB2Q92519 343 aa18.6■□□□□ 0.57
GHDC-211ENST00000590520 NOL10Q9BSC4 688 aaKnown RBP18.6■□□□□ 0.57
GHDC-211ENST00000590520 C11orf49Q9H6J7 331 aa18.6■□□□□ 0.57
GHDC-211ENST00000590520 ZMYND8Q9ULU4 1186 aaPredicted RBP18.6■□□□□ 0.57
GHDC-211ENST00000590520 FRMPD3Q5JV73 1810 aa18.59■□□□□ 0.57
GHDC-211ENST00000590520 TRIM32Q13049 653 aa18.59■□□□□ 0.57
GHDC-211ENST00000590520 MTMR2Q13614 643 aa18.59■□□□□ 0.57
GHDC-211ENST00000590520 GPR153Q6NV75 609 aa18.59■□□□□ 0.57
GHDC-211ENST00000590520 TBC1D9Q6ZT07 1266 aa18.59■□□□□ 0.57
GHDC-211ENST00000590520 WDR18Q9BV38 432 aa18.59■□□□□ 0.57
GHDC-211ENST00000590520 TMOD4Q9NZQ9 345 aa18.59■□□□□ 0.57
GHDC-211ENST00000590520 DLL1O00548 723 aa18.58■□□□□ 0.56
GHDC-211ENST00000590520 ASNSP08243 561 aa18.58■□□□□ 0.56
GHDC-211ENST00000590520 MNX1P50219 401 aaPredicted RBP18.58■□□□□ 0.56
GHDC-211ENST00000590520 MAP3K21Q5TCX8 1036 aa18.58■□□□□ 0.56
GHDC-211ENST00000590520 SH3RF3Q8TEJ3 882 aaPredicted RBP18.58■□□□□ 0.56
GHDC-211ENST00000590520 DHX36Q9H2U1 1008 aaKnown RBP18.58■□□□□ 0.56
GHDC-211ENST00000590520 PI4KBQ9UBF8 816 aa18.58■□□□□ 0.56
GHDC-211ENST00000590520 OGDHLQ9ULD0 1010 aa18.58■□□□□ 0.56
GHDC-211ENST00000590520 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.58■□□□□ 0.56
GHDC-211ENST00000590520 UQCRFS1P1P0C7P4 283 aa18.57■□□□□ 0.56
GHDC-211ENST00000590520 PRKAR2AP13861 404 aaKnown RBP18.57■□□□□ 0.56
GHDC-211ENST00000590520 HOXA7P31268 230 aaPredicted RBP18.57■□□□□ 0.56
GHDC-211ENST00000590520 MCAMP43121 646 aa18.57■□□□□ 0.56
GHDC-211ENST00000590520 BACE1P56817 501 aa18.57■□□□□ 0.56
GHDC-211ENST00000590520 NUDT12Q9BQG2 462 aa18.57■□□□□ 0.56
GHDC-211ENST00000590520 LRP2BPQ9P2M1 347 aa18.57■□□□□ 0.56
GHDC-211ENST00000590520 MYO5AQ9Y4I1 1855 aaKnown RBP18.56■□□□□ 0.56
GHDC-211ENST00000590520 BAG3O95817 575 aa18.56■□□□□ 0.56
GHDC-211ENST00000590520 XRCC5P13010 732 aaKnown RBP18.56■□□□□ 0.56
GHDC-211ENST00000590520 PLCG2P16885 1265 aa18.56■□□□□ 0.56
GHDC-211ENST00000590520 CYP2B6P20813 491 aa18.56■□□□□ 0.56
GHDC-211ENST00000590520 HERVK_113P62684 666 aa18.56■□□□□ 0.56
GHDC-211ENST00000590520 PDE3AQ14432 1141 aa18.56■□□□□ 0.56
GHDC-211ENST00000590520 TRMT44Q8IYL2 757 aaKnown RBP18.56■□□□□ 0.56
GHDC-211ENST00000590520 GTF3C2Q8WUA4 911 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms