RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 ZSCAN29Q8IWY8 852 aaPredicted RBP14.38□□□□□ -0.11
APOC1-206ENST00000590334 AMOTL1Q8IY63 956 aa14.38□□□□□ -0.11
APOC1-206ENST00000590334 ANO2Q9NQ90 1003 aa14.38□□□□□ -0.11
APOC1-206ENST00000590334 CTNNA3Q9UI47 895 aa14.38□□□□□ -0.11
APOC1-206ENST00000590334 HERC5Q9UII4 1024 aaKnown RBP14.38□□□□□ -0.11
APOC1-206ENST00000590334 U3KPZ7 1027 aaPredicted RBP14.38□□□□□ -0.11
APOC1-206ENST00000590334 GREB1LQ9C091 1923 aaPredicted RBP14.38□□□□□ -0.11
APOC1-206ENST00000590334 CYP2D6P10635 497 aa14.37□□□□□ -0.11
APOC1-206ENST00000590334 SERPINB13Q9UIV8 391 aa14.37□□□□□ -0.11
APOC1-206ENST00000590334 PHIPQ8WWQ0 1821 aa14.36□□□□□ -0.11
APOC1-206ENST00000590334 CYP2D7A0A087X1C5 515 aa14.36□□□□□ -0.11
APOC1-206ENST00000590334 NF2P35240 595 aa14.36□□□□□ -0.11
APOC1-206ENST00000590334 EVX2Q03828 476 aa14.36□□□□□ -0.11
APOC1-206ENST00000590334 PPARAQ07869 468 aa14.36□□□□□ -0.11
APOC1-206ENST00000590334 NECTIN1Q15223 517 aa14.36□□□□□ -0.11
APOC1-206ENST00000590334 DCAF15Q66K64 600 aa14.36□□□□□ -0.11
APOC1-206ENST00000590334 RBM8AQ9Y5S9 174 aaKnown RBP14.36□□□□□ -0.11
APOC1-206ENST00000590334 MINDY4BA8MYZ0 360 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 SMIM22K7EJ46 135 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 ZNF213O14771 459 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 SEC24BO95487 1268 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 FMR1Q06787 632 aaKnown RBP eCLIP14.35□□□□□ -0.11
APOC1-206ENST00000590334 MAP3K11Q16584 847 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 IMMTQ16891 758 aaKnown RBP14.35□□□□□ -0.11
APOC1-206ENST00000590334 CST9Q5W186 159 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 TATDN1Q6P1N9 297 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 C16orf86Q6ZW13 317 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 USP26Q9BXU7 913 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 NBPF3Q9H094 633 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 DNAJC18Q9H819 358 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 SWAP70Q9UH65 585 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 ZNF112Q9UJU3 913 aa14.35□□□□□ -0.11
APOC1-206ENST00000590334 PHF20L1A8MW92 1017 aa14.34□□□□□ -0.11
APOC1-206ENST00000590334 USP2O75604 605 aaPredicted RBP14.34□□□□□ -0.11
APOC1-206ENST00000590334 FGRP09769 529 aa14.34□□□□□ -0.11
APOC1-206ENST00000590334 FKBP1BP68106 108 aa14.34□□□□□ -0.11
APOC1-206ENST00000590334 SLC4A8Q2Y0W8 1093 aa14.34□□□□□ -0.11
APOC1-206ENST00000590334 CRACR2BQ8N4Y2 399 aaPredicted RBP14.34□□□□□ -0.11
APOC1-206ENST00000590334 ZNF341Q9BYN7 854 aa14.34□□□□□ -0.11
APOC1-206ENST00000590334 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.34□□□□□ -0.11
APOC1-206ENST00000590334 UNCXA6NJT0 531 aa14.33□□□□□ -0.12
APOC1-206ENST00000590334 PPP1R12BO60237 982 aaPredicted RBP14.33□□□□□ -0.12
APOC1-206ENST00000590334 SLC3A2P08195 630 aaKnown RBP14.33□□□□□ -0.12
APOC1-206ENST00000590334 CYP21A2P08686 494 aa14.33□□□□□ -0.12
APOC1-206ENST00000590334 SLURP2P0DP57 97 aa14.33□□□□□ -0.12
APOC1-206ENST00000590334 PCP11498 1178 aaKnown RBP14.33□□□□□ -0.12
APOC1-206ENST00000590334 SHMT1P34896 483 aa14.33□□□□□ -0.12
APOC1-206ENST00000590334 CTDSPL2Q05D32 466 aa14.33□□□□□ -0.12
APOC1-206ENST00000590334 MIGA2Q7L4E1 593 aa14.33□□□□□ -0.12
APOC1-206ENST00000590334 STAG1Q8WVM7 1258 aa14.33□□□□□ -0.12
APOC1-206ENST00000590334 KCNB2Q92953 911 aa14.33□□□□□ -0.12
APOC1-206ENST00000590334 KLRG1Q96E93 195 aa14.33□□□□□ -0.12
APOC1-206ENST00000590334 DYNLL2Q96FJ2 89 aa14.33□□□□□ -0.12
APOC1-206ENST00000590334 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.33□□□□□ -0.12
APOC1-206ENST00000590334 FAM196BA6NMK8 535 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 SLC27A2O14975 620 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 CELF2O95319 508 aaKnown RBP14.32□□□□□ -0.12
APOC1-206ENST00000590334 HSPA4P34932 840 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 CDK8P49336 464 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 NT5C2P49902 561 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 HAND2P61296 217 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 PDE4BQ07343 736 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 TSGA10IPQ3SY00 556 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 AKNAD1Q5T1N1 836 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 CREB3L3Q68CJ9 461 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.32□□□□□ -0.124e-15■■■□□ 17.6
APOC1-206ENST00000590334 TRIM34Q9BYJ4 488 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 BACH2Q9BYV9 841 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 ZNF287Q9HBT7 754 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 TACC3Q9Y6A5 838 aa14.32□□□□□ -0.12
APOC1-206ENST00000590334 MYH4Q9Y623 1939 aa14.31□□□□□ -0.12
APOC1-206ENST00000590334 ORC4O43929 436 aa14.31□□□□□ -0.12
APOC1-206ENST00000590334 IREB2P48200 963 aaKnown RBP14.31□□□□□ -0.12
APOC1-206ENST00000590334 LDLRAD1Q5T700 205 aa14.31□□□□□ -0.12
APOC1-206ENST00000590334 RNF20Q5VTR2 975 aa14.31□□□□□ -0.12
APOC1-206ENST00000590334 TBC1D10CQ8IV04 446 aa14.31□□□□□ -0.12
APOC1-206ENST00000590334 C2orf69Q8N8R5 385 aa14.31□□□□□ -0.12
APOC1-206ENST00000590334 SLC44A5Q8NCS7 719 aa14.31□□□□□ -0.12
APOC1-206ENST00000590334 RNF41Q9H4P4 317 aaPredicted RBP14.31□□□□□ -0.12
APOC1-206ENST00000590334 ZNF408Q9H9D4 720 aa14.31□□□□□ -0.12
APOC1-206ENST00000590334 GBA2Q9HCG7 927 aaPredicted RBP14.31□□□□□ -0.12
APOC1-206ENST00000590334 CTNND1O60716 968 aaKnown RBP14.3□□□□□ -0.12
APOC1-206ENST00000590334 RASA1P20936 1047 aa14.3□□□□□ -0.12
APOC1-206ENST00000590334 RRP1BQ14684 758 aaKnown RBP14.3□□□□□ -0.12
APOC1-206ENST00000590334 CERKLQ49MI3 558 aaPredicted RBP14.3□□□□□ -0.12
APOC1-206ENST00000590334 NOL9Q5SY16 702 aaKnown RBP14.3□□□□□ -0.12
APOC1-206ENST00000590334 MFSD6Q6ZSS7 791 aa14.3□□□□□ -0.12
APOC1-206ENST00000590334 ARMC9Q7Z3E5 817 aa14.3□□□□□ -0.12
APOC1-206ENST00000590334 CCDC17Q96LX7 622 aa14.3□□□□□ -0.12
APOC1-206ENST00000590334 WRNIP1Q96S55 665 aa14.3□□□□□ -0.12
APOC1-206ENST00000590334 GINM1Q9NU53 330 aa14.3□□□□□ -0.12
APOC1-206ENST00000590334 ANGEL1Q9UNK9 670 aaKnown RBP14.3□□□□□ -0.12
APOC1-206ENST00000590334 FZD1Q9UP38 647 aa14.3□□□□□ -0.12
APOC1-206ENST00000590334 TAF6LQ9Y6J9 622 aa14.3□□□□□ -0.12
APOC1-206ENST00000590334 PTPRFP10586 1907 aa14.3□□□□□ -0.12
APOC1-206ENST00000590334 TMEM88BA6NKF7 163 aa14.29□□□□□ -0.12
APOC1-206ENST00000590334 E7EWF7 191 aa14.29□□□□□ -0.12
APOC1-206ENST00000590334 CAP2P40123 477 aa14.29□□□□□ -0.12
APOC1-206ENST00000590334 MAP3K9P80192 1104 aa14.29□□□□□ -0.12
APOC1-206ENST00000590334 PRKG1Q13976 671 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms