RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 PPATQ06203 517 aa22.11■■□□□ 1.13
DDX39A-212ENST00000590260 AAMPQ13685 434 aa22.11■■□□□ 1.13
DDX39A-212ENST00000590260 CCL15Q16663 113 aa22.11■■□□□ 1.13
DDX39A-212ENST00000590260 SCYL3Q8IZE3 742 aa22.11■■□□□ 1.13
DDX39A-212ENST00000590260 FAM43AQ8N2R8 423 aa22.11■■□□□ 1.13
DDX39A-212ENST00000590260 LCORLQ8N3X6 602 aa22.11■■□□□ 1.13
DDX39A-212ENST00000590260 SAP30BPQ9UHR5 308 aaKnown RBP22.11■■□□□ 1.13
DDX39A-212ENST00000590260 KCNH4Q9UQ05 1017 aa22.11■■□□□ 1.13
DDX39A-212ENST00000590260 PTPRFP10586 1907 aa22.1■■□□□ 1.13
DDX39A-212ENST00000590260 MAGEB6P1A0A0J9YX57 407 aa22.1■■□□□ 1.13
DDX39A-212ENST00000590260 GTF2A2P52657 109 aa22.1■■□□□ 1.13
DDX39A-212ENST00000590260 IRX6P78412 446 aaPredicted RBP22.1■■□□□ 1.13
DDX39A-212ENST00000590260 SHROOM1Q2M3G4 852 aaPredicted RBP22.1■■□□□ 1.13
DDX39A-212ENST00000590260 SLC4A8Q2Y0W8 1093 aa22.1■■□□□ 1.13
DDX39A-212ENST00000590260 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.1■■□□□ 1.13
DDX39A-212ENST00000590260 PTPRAP18433 802 aa22.09■■□□□ 1.13
DDX39A-212ENST00000590260 ANKRD45Q5TZF3 282 aa22.09■■□□□ 1.13
DDX39A-212ENST00000590260 SMC5Q8IY18 1101 aa22.09■■□□□ 1.13
DDX39A-212ENST00000590260 DHX36Q9H2U1 1008 aaKnown RBP22.09■■□□□ 1.13
DDX39A-212ENST00000590260 GPR25O00155 361 aa22.08■■□□□ 1.13
DDX39A-212ENST00000590260 CTNND1O60716 968 aaKnown RBP22.08■■□□□ 1.13
DDX39A-212ENST00000590260 IFFO2Q5TF58 517 aa22.08■■□□□ 1.13
DDX39A-212ENST00000590260 ZNF296Q8WUU4 475 aaPredicted RBP22.08■■□□□ 1.13
DDX39A-212ENST00000590260 GCC1Q96CN9 775 aa22.08■■□□□ 1.13
DDX39A-212ENST00000590260 ARMT1Q9H993 441 aa22.08■■□□□ 1.13
DDX39A-212ENST00000590260 PI4KBQ9UBF8 816 aa22.08■■□□□ 1.13
DDX39A-212ENST00000590260 TTC41PQ6P2S7 1318 aa22.07■■□□□ 1.12
DDX39A-212ENST00000590260 BTBD19C9JJ37 291 aa22.07■■□□□ 1.12
DDX39A-212ENST00000590260 PRKAB2O43741 272 aa22.07■■□□□ 1.12
DDX39A-212ENST00000590260 CAP1Q01518 475 aa22.07■■□□□ 1.12
DDX39A-212ENST00000590260 CRHR2Q13324 411 aa22.07■■□□□ 1.12
DDX39A-212ENST00000590260 UBE3CQ15386 1083 aa22.07■■□□□ 1.12
DDX39A-212ENST00000590260 NOM1Q5C9Z4 860 aaKnown RBP22.07■■□□□ 1.12
DDX39A-212ENST00000590260 CERS3Q8IU89 383 aa22.07■■□□□ 1.12
DDX39A-212ENST00000590260 KBTBD3Q8NAB2 608 aa22.07■■□□□ 1.12
DDX39A-212ENST00000590260 SDR42E1Q8WUS8 393 aa22.07■■□□□ 1.12
DDX39A-212ENST00000590260 PUS7LQ9H0K6 701 aaKnown RBP22.07■■□□□ 1.12
DDX39A-212ENST00000590260 HERC5Q9UII4 1024 aaKnown RBP22.07■■□□□ 1.12
DDX39A-212ENST00000590260 AFG3L2Q9Y4W6 797 aa22.07■■□□□ 1.12
DDX39A-212ENST00000590260 ZHX2Q9Y6X8 837 aa22.07■■□□□ 1.12
DDX39A-212ENST00000590260 ALDH1A1P00352 501 aa22.06■■□□□ 1.12
DDX39A-212ENST00000590260 MX1P20591 662 aa22.06■■□□□ 1.12
DDX39A-212ENST00000590260 CAP2P40123 477 aa22.06■■□□□ 1.12
DDX39A-212ENST00000590260 USP5P45974 858 aa22.06■■□□□ 1.12
DDX39A-212ENST00000590260 SNAPC2Q13487 334 aa22.06■■□□□ 1.12
DDX39A-212ENST00000590260 SMIM22K7EJ46 135 aa22.05■■□□□ 1.12
DDX39A-212ENST00000590260 MBD4O95243 580 aa22.05■■□□□ 1.12
DDX39A-212ENST00000590260 CETPP11597 493 aa22.05■■□□□ 1.12
DDX39A-212ENST00000590260 PLCD1P51178 756 aa22.05■■□□□ 1.12
DDX39A-212ENST00000590260 GPAT2Q6NUI2 795 aa22.05■■□□□ 1.12
DDX39A-212ENST00000590260 FOXP4Q8IVH2 680 aaPredicted RBP22.04■■□□□ 1.12
DDX39A-212ENST00000590260 GPATCH3Q96I76 525 aa22.04■■□□□ 1.12
DDX39A-212ENST00000590260 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.04■■□□□ 1.125e-18■□□□□ 9.3
DDX39A-212ENST00000590260 MCOLN1Q9GZU1 580 aa22.04■■□□□ 1.12
DDX39A-212ENST00000590260 DCP1AQ9NPI6 582 aaPredicted RBP22.04■■□□□ 1.12
DDX39A-212ENST00000590260 STAP2Q9UGK3 403 aa22.04■■□□□ 1.12
DDX39A-212ENST00000590260 BAZ2AQ9UIF9 1905 aaKnown RBP22.04■■□□□ 1.12
DDX39A-212ENST00000590260 A0A0G2JLL6 359 aaPredicted RBP22.03■■□□□ 1.12
DDX39A-212ENST00000590260 PRRT2Q7Z6L0 340 aaPredicted RBP22.03■■□□□ 1.12
DDX39A-212ENST00000590260 CRNKL1Q9BZJ0 848 aaKnown RBP22.03■■□□□ 1.12
DDX39A-212ENST00000590260 LOC285556D6RIA3 1793 aa22.02■■□□□ 1.12
DDX39A-212ENST00000590260 ZSWIM8A7E2V4 1837 aa22.02■■□□□ 1.12
DDX39A-212ENST00000590260 CXCL11O14625 94 aa22.02■■□□□ 1.12
DDX39A-212ENST00000590260 CYP2D6P10635 497 aa22.02■■□□□ 1.12
DDX39A-212ENST00000590260 PDE1AP54750 535 aa22.02■■□□□ 1.12
DDX39A-212ENST00000590260 GABPAQ06546 454 aa22.02■■□□□ 1.12
DDX39A-212ENST00000590260 OSBP2Q969R2 916 aa22.02■■□□□ 1.12
DDX39A-212ENST00000590260 LNPKQ9C0E8 428 aa22.02■■□□□ 1.12
DDX39A-212ENST00000590260 EHD4Q9H223 541 aa22.02■■□□□ 1.12
DDX39A-212ENST00000590260 RWDD1Q9H446 243 aaPredicted RBP22.02■■□□□ 1.12
DDX39A-212ENST00000590260 PICK1Q9NRD5 415 aa22.02■■□□□ 1.12
DDX39A-212ENST00000590260 GLRX3O76003 335 aaKnown RBP22.01■■□□□ 1.11
DDX39A-212ENST00000590260 GDF11O95390 407 aa22.01■■□□□ 1.11
DDX39A-212ENST00000590260 DGKZQ13574 1117 aa22.01■■□□□ 1.11
DDX39A-212ENST00000590260 B4GALNT3Q6L9W6 998 aa22.01■■□□□ 1.11
DDX39A-212ENST00000590260 TATDN1Q6P1N9 297 aa22.01■■□□□ 1.11
DDX39A-212ENST00000590260 ANKRD23Q86SG2 305 aa22.01■■□□□ 1.11
DDX39A-212ENST00000590260 ADGRA2Q96PE1 1338 aa22.01■■□□□ 1.11
DDX39A-212ENST00000590260 RNF113AO15541 343 aaKnown RBP22■■□□□ 1.11
DDX39A-212ENST00000590260 FKTNO75072 461 aa22■■□□□ 1.11
DDX39A-212ENST00000590260 HLA-DOAP06340 250 aa22■■□□□ 1.11
DDX39A-212ENST00000590260 SHMT1P34896 483 aa22■■□□□ 1.11
DDX39A-212ENST00000590260 TAF1CQ15572 869 aaPredicted RBP22■■□□□ 1.11
DDX39A-212ENST00000590260 OTUD7BQ6GQQ9 843 aa22■■□□□ 1.11
DDX39A-212ENST00000590260 CYP2D7A0A087X1C5 515 aa21.99■■□□□ 1.11
DDX39A-212ENST00000590260 TRIM75PA6NK02 468 aa21.99■■□□□ 1.11
DDX39A-212ENST00000590260 M0R2C6 588 aa21.99■■□□□ 1.11
DDX39A-212ENST00000590260 ERC2O15083 957 aa21.99■■□□□ 1.11
DDX39A-212ENST00000590260 NUCB1Q02818 461 aa21.99■■□□□ 1.11
DDX39A-212ENST00000590260 ZSCAN25Q6NSZ9 544 aa21.99■■□□□ 1.11
DDX39A-212ENST00000590260 CRACR2BQ8N4Y2 399 aaPredicted RBP21.99■■□□□ 1.11
DDX39A-212ENST00000590260 ABHD8Q96I13 439 aa21.99■■□□□ 1.11
DDX39A-212ENST00000590260 STRBPQ96SI9 672 aaKnown RBP21.99■■□□□ 1.11
DDX39A-212ENST00000590260 SEC62Q99442 399 aaKnown RBP21.99■■□□□ 1.11
DDX39A-212ENST00000590260 ZCCHC17Q9NP64 241 aaKnown RBP21.99■■□□□ 1.11
DDX39A-212ENST00000590260 MCM9Q9NXL9 1143 aa21.99■■□□□ 1.11
DDX39A-212ENST00000590260 SERPINB13Q9UIV8 391 aa21.99■■□□□ 1.11
DDX39A-212ENST00000590260 PDHXO00330 501 aa21.98■■□□□ 1.11
DDX39A-212ENST00000590260 TTC6Q86TZ1 520 aa21.98■■□□□ 1.11
DDX39A-212ENST00000590260 APPBP2Q92624 585 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms