RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 SRRDQ9UH36 339 aa17.54■□□□□ 0.4
MBD1-220ENST00000589758 PHIPQ8WWQ0 1821 aa17.54■□□□□ 0.4
MBD1-220ENST00000589758 FAM196BA6NMK8 535 aa17.53■□□□□ 0.4
MBD1-220ENST00000589758 FMNL1O95466 1100 aaPredicted RBP17.53■□□□□ 0.4
MBD1-220ENST00000589758 CYP2C8P10632 490 aa17.53■□□□□ 0.4
MBD1-220ENST00000589758 BCRP11274 1271 aa17.53■□□□□ 0.4
MBD1-220ENST00000589758 CAP2P40123 477 aa17.53■□□□□ 0.4
MBD1-220ENST00000589758 TMED8Q6PL24 325 aaPredicted RBP17.53■□□□□ 0.4
MBD1-220ENST00000589758 FOXP4Q8IVH2 680 aaPredicted RBP17.53■□□□□ 0.4
MBD1-220ENST00000589758 RPAP2Q8IXW5 612 aaPredicted RBP17.53■□□□□ 0.4
MBD1-220ENST00000589758 TRIM47Q96LD4 638 aa17.53■□□□□ 0.4
MBD1-220ENST00000589758 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
MBD1-220ENST00000589758 PIH1D3Q9NQM4 214 aaKnown RBP17.53■□□□□ 0.4
MBD1-220ENST00000589758 TLR7Q9NYK1 1049 aaKnown RBP17.53■□□□□ 0.4
MBD1-220ENST00000589758 DDX19BQ9UMR2 479 aa17.53■□□□□ 0.4
MBD1-220ENST00000589758 ZSWIM8A7E2V4 1837 aa17.52■□□□□ 0.4
MBD1-220ENST00000589758 HMMRO75330 724 aa17.52■□□□□ 0.4
MBD1-220ENST00000589758 FCGRTP55899 365 aa17.52■□□□□ 0.4
MBD1-220ENST00000589758 ADGRA1Q86SQ6 560 aa17.52■□□□□ 0.4
MBD1-220ENST00000589758 PROCA1Q8NCQ7 364 aaPredicted RBP17.52■□□□□ 0.4
MBD1-220ENST00000589758 ZNF280CQ8ND82 737 aa17.52■□□□□ 0.4
MBD1-220ENST00000589758 AS3MTQ9HBK9 375 aa17.52■□□□□ 0.4
MBD1-220ENST00000589758 RCAN3Q9UKA8 241 aa17.52■□□□□ 0.4
MBD1-220ENST00000589758 AGTPBP1Q9UPW5 1226 aa17.52■□□□□ 0.4
MBD1-220ENST00000589758 EXOC6BQ9Y2D4 811 aa17.52■□□□□ 0.4
MBD1-220ENST00000589758 PTPRFP10586 1907 aa17.52■□□□□ 0.4
MBD1-220ENST00000589758 USP17L5A8MUK1 530 aa17.51■□□□□ 0.39
MBD1-220ENST00000589758 IDH1O75874 414 aaKnown RBP17.51■□□□□ 0.39
MBD1-220ENST00000589758 EN2P19622 333 aaPredicted RBP17.51■□□□□ 0.39
MBD1-220ENST00000589758 OSBPP22059 807 aa17.51■□□□□ 0.39
MBD1-220ENST00000589758 CYP7A1P22680 504 aa17.51■□□□□ 0.39
MBD1-220ENST00000589758 CTGFP29279 349 aa17.51■□□□□ 0.39
MBD1-220ENST00000589758 SPP2Q13103 211 aa17.51■□□□□ 0.39
MBD1-220ENST00000589758 SLC4A8Q2Y0W8 1093 aa17.51■□□□□ 0.39
MBD1-220ENST00000589758 PDE4DIPQ5VU43 2346 aa17.51■□□□□ 0.39
MBD1-220ENST00000589758 AACSQ86V21 672 aa17.51■□□□□ 0.39
MBD1-220ENST00000589758 MAPKAPK5Q8IW41 473 aa17.51■□□□□ 0.39
MBD1-220ENST00000589758 RHPN1Q8TCX5 695 aa17.51■□□□□ 0.39
MBD1-220ENST00000589758 SMCR8Q8TEV9 937 aaPredicted RBP17.51■□□□□ 0.39
MBD1-220ENST00000589758 PNMA3Q9UL41 463 aa17.51■□□□□ 0.39
MBD1-220ENST00000589758 FLT1P17948 1338 aa17.5■□□□□ 0.39
MBD1-220ENST00000589758 MYO5AQ9Y4I1 1855 aaKnown RBP17.5■□□□□ 0.39
MBD1-220ENST00000589758 ECM2O94769 699 aaPredicted RBP17.5■□□□□ 0.39
MBD1-220ENST00000589758 MAP3K12Q12852 859 aa17.5■□□□□ 0.39
MBD1-220ENST00000589758 PABPC4Q13310 644 aaKnown RBP eCLIP17.5■□□□□ 0.39
MBD1-220ENST00000589758 METTL16Q86W50 562 aaKnown RBP17.5■□□□□ 0.39
MBD1-220ENST00000589758 RAET1EQ8TD07 263 aa17.5■□□□□ 0.39
MBD1-220ENST00000589758 SH3TC2Q8TF17 1288 aa17.5■□□□□ 0.39
MBD1-220ENST00000589758 TRIM34Q9BYJ4 488 aa17.5■□□□□ 0.39
MBD1-220ENST00000589758 GINM1Q9NU53 330 aa17.5■□□□□ 0.39
MBD1-220ENST00000589758 COG6Q9Y2V7 657 aa17.5■□□□□ 0.39
MBD1-220ENST00000589758 MYPNQ86TC9 1320 aa17.49■□□□□ 0.39
MBD1-220ENST00000589758 FOCADQ5VW36 1801 aa17.49■□□□□ 0.39
MBD1-220ENST00000589758 ATAD5Q96QE3 1844 aa17.49■□□□□ 0.39
MBD1-220ENST00000589758 ASNSP08243 561 aa17.49■□□□□ 0.39
MBD1-220ENST00000589758 CCDC84Q86UT8 332 aaPredicted RBP17.49■□□□□ 0.39
MBD1-220ENST00000589758 CLASRPQ8N2M8 674 aaKnown RBP17.49■□□□□ 0.39
MBD1-220ENST00000589758 CRACR2BQ8N4Y2 399 aaPredicted RBP17.49■□□□□ 0.39
MBD1-220ENST00000589758 KIF1BPQ96EK5 621 aa17.49■□□□□ 0.39
MBD1-220ENST00000589758 ZBTB40Q9NUA8 1239 aa17.49■□□□□ 0.39
MBD1-220ENST00000589758 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.49■□□□□ 0.39
MBD1-220ENST00000589758 CDK5RAP2Q96SN8 1893 aa17.49■□□□□ 0.39
MBD1-220ENST00000589758 TNRC18O15417 2968 aaPredicted RBP17.48■□□□□ 0.39
MBD1-220ENST00000589758 HLA-DOAP06340 250 aa17.48■□□□□ 0.39
MBD1-220ENST00000589758 GRK4P32298 578 aa17.48■□□□□ 0.39
MBD1-220ENST00000589758 DYNLL1P63167 89 aaKnown RBP17.48■□□□□ 0.39
MBD1-220ENST00000589758 TTF1Q15361 905 aaPredicted RBP17.48■□□□□ 0.39
MBD1-220ENST00000589758 SH3D19Q5HYK7 790 aa17.48■□□□□ 0.39
MBD1-220ENST00000589758 MAGEB6Q8N7X4 407 aa17.48■□□□□ 0.39
MBD1-220ENST00000589758 IL1RAPL2Q9NP60 686 aa17.48■□□□□ 0.39
MBD1-220ENST00000589758 PALD1Q9ULE6 856 aa17.48■□□□□ 0.39
MBD1-220ENST00000589758 MGAMO43451 1857 aa17.48■□□□□ 0.39
MBD1-220ENST00000589758 SIPA1L1O43166 1804 aa17.47■□□□□ 0.39
MBD1-220ENST00000589758 RAB11FIP3O75154 756 aa17.47■□□□□ 0.39
MBD1-220ENST00000589758 RRP1BQ14684 758 aaKnown RBP17.47■□□□□ 0.39
MBD1-220ENST00000589758 TREML2Q5T2D2 321 aa17.47■□□□□ 0.39
MBD1-220ENST00000589758 WDR18Q9BV38 432 aa17.47■□□□□ 0.39
MBD1-220ENST00000589758 ANTXR1Q9H6X2 564 aa17.47■□□□□ 0.39
MBD1-220ENST00000589758 KIAA0100Q14667 2235 aaKnown RBP17.46■□□□□ 0.39
MBD1-220ENST00000589758 IFIT2P09913 472 aaKnown RBP17.46■□□□□ 0.39
MBD1-220ENST00000589758 USP5P45974 858 aa17.46■□□□□ 0.39
MBD1-220ENST00000589758 GCLCP48506 637 aaPredicted RBP17.46■□□□□ 0.39
MBD1-220ENST00000589758 HMGCS2P54868 508 aa17.46■□□□□ 0.39
MBD1-220ENST00000589758 PRKCZQ05513 592 aa17.46■□□□□ 0.39
MBD1-220ENST00000589758 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.46■□□□□ 0.39
MBD1-220ENST00000589758 DNAJC18Q9H819 358 aa17.46■□□□□ 0.39
MBD1-220ENST00000589758 SAP30BPQ9UHR5 308 aaKnown RBP17.46■□□□□ 0.39
MBD1-220ENST00000589758 LOC285556D6RIA3 1793 aa17.45■□□□□ 0.38
MBD1-220ENST00000589758 HTTP42858 3142 aa17.45■□□□□ 0.38
MBD1-220ENST00000589758 C19orf81C9J6K1 198 aa17.45■□□□□ 0.38
MBD1-220ENST00000589758 TNPO2O14787 897 aaKnown RBP17.45■□□□□ 0.38
MBD1-220ENST00000589758 MYCP01106 439 aaPredicted RBP17.45■□□□□ 0.38
MBD1-220ENST00000589758 BACE1P56817 501 aa17.45■□□□□ 0.38
MBD1-220ENST00000589758 UBXN2AP68543 259 aa17.45■□□□□ 0.38
MBD1-220ENST00000589758 ANKRD13CQ8N6S4 541 aa17.45■□□□□ 0.38
MBD1-220ENST00000589758 MIGA1Q8NAN2 632 aa17.45■□□□□ 0.38
MBD1-220ENST00000589758 SLAIN1Q8ND83 568 aa17.45■□□□□ 0.38
MBD1-220ENST00000589758 NKX2-3Q8TAU0 364 aa17.45■□□□□ 0.38
MBD1-220ENST00000589758 TMOD4Q9NZQ9 345 aa17.45■□□□□ 0.38
MBD1-220ENST00000589758 NDUFB9Q9Y6M9 179 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms