RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 SEC31BQ9NQW1 1179 aa7.6□□□□□ -1.19
SMAD4-208ENST00000589706 SLIT2O94813 1529 aa7.6□□□□□ -1.19
SMAD4-208ENST00000589706 TMEM131LA2VDJ0 1609 aa7.6□□□□□ -1.19
SMAD4-208ENST00000589706 WASHC2AQ641Q2 1341 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 LMTK2Q8IWU2 1503 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 ZBTB42B2RXF5 422 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 PDE2AO00408 941 aaPredicted RBP7.59□□□□□ -1.19
SMAD4-208ENST00000589706 ENC1O14682 589 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 KCNQ2O43526 872 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 GREM1O60565 184 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 GFRA3O60609 400 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 SOX9P48436 509 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 SNAP47Q5SQN1 464 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 FAM182BQ5T319 152 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 NBPF6Q5VWK0 638 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 TTBK2Q6IQ55 1244 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 AGMOQ6ZNB7 445 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 ASAP3Q8TDY4 903 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 ZNF837Q96EG3 531 aaPredicted RBP7.59□□□□□ -1.19
SMAD4-208ENST00000589706 NBPF4Q96M43 638 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 CAMKK2Q96RR4 588 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 ZNF576Q9H609 170 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 ZNF408Q9H9D4 720 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 STRIP2Q9ULQ0 834 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 PHF24Q9UPV7 400 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 GCC2Q8IWJ2 1684 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 ERBINQ96RT1 1412 aa7.59□□□□□ -1.19
SMAD4-208ENST00000589706 KIF15Q9NS87 1388 aa7.59□□□□□ -1.2
SMAD4-208ENST00000589706 XRN1Q8IZH2 1706 aaKnown RBP7.58□□□□□ -1.2
SMAD4-208ENST00000589706 RPRD2Q5VT52 1461 aaKnown RBP7.58□□□□□ -1.2
SMAD4-208ENST00000589706 J3QW42 95 aa7.58□□□□□ -1.2
SMAD4-208ENST00000589706 NRG2O14511 850 aaPredicted RBP7.58□□□□□ -1.2
SMAD4-208ENST00000589706 TFE3P19532 575 aaPredicted RBP7.58□□□□□ -1.2
SMAD4-208ENST00000589706 FGFR3P22607 806 aa7.58□□□□□ -1.2
SMAD4-208ENST00000589706 MLLT1Q03111 559 aaPredicted RBP7.58□□□□□ -1.2
SMAD4-208ENST00000589706 FAAP100Q0VG06 881 aa7.58□□□□□ -1.2
SMAD4-208ENST00000589706 HFE2Q6ZVN8 426 aa7.58□□□□□ -1.2
SMAD4-208ENST00000589706 GOLM1Q8NBJ4 401 aa7.58□□□□□ -1.2
SMAD4-208ENST00000589706 GTPBP3Q969Y2 492 aaKnown RBP7.58□□□□□ -1.2
SMAD4-208ENST00000589706 PBX4Q9BYU1 374 aa7.58□□□□□ -1.2
SMAD4-208ENST00000589706 RASSF4Q9H2L5 321 aa7.58□□□□□ -1.2
SMAD4-208ENST00000589706 AAASQ9NRG9 546 aa7.58□□□□□ -1.2
SMAD4-208ENST00000589706 UBP1Q9NZI7 540 aa7.58□□□□□ -1.2
SMAD4-208ENST00000589706 DISP2A7MBM2 1401 aa7.58□□□□□ -1.2
SMAD4-208ENST00000589706 CEP350Q5VT06 3117 aa7.58□□□□□ -1.2
SMAD4-208ENST00000589706 RGPD1P0DJD0 1748 aa7.58□□□□□ -1.2
SMAD4-208ENST00000589706 ST8SIA5O15466 376 aa7.57□□□□□ -1.2
SMAD4-208ENST00000589706 GHRHP01286 108 aa7.57□□□□□ -1.2
SMAD4-208ENST00000589706 ITGA6P23229 1130 aa7.57□□□□□ -1.2
SMAD4-208ENST00000589706 RPS26P62854 115 aaKnown RBP7.57□□□□□ -1.2
SMAD4-208ENST00000589706 ATP11AP98196 1134 aa7.57□□□□□ -1.2
SMAD4-208ENST00000589706 BMS1Q14692 1282 aaKnown RBP7.57□□□□□ -1.2
SMAD4-208ENST00000589706 PCSK7Q16549 785 aa7.57□□□□□ -1.2
SMAD4-208ENST00000589706 IGFLR1Q9H665 355 aa7.57□□□□□ -1.2
SMAD4-208ENST00000589706 GPN3Q9UHW5 284 aaPredicted RBP7.57□□□□□ -1.2
SMAD4-208ENST00000589706 DACH1Q9UI36 760 aa7.57□□□□□ -1.2
SMAD4-208ENST00000589706 MRVI1Q9Y6F6 885 aa7.57□□□□□ -1.2
SMAD4-208ENST00000589706 NALCNQ8IZF0 1738 aa7.57□□□□□ -1.2
SMAD4-208ENST00000589706 RRP9O43818 475 aaKnown RBP7.56□□□□□ -1.2
SMAD4-208ENST00000589706 PAGE1O75459 146 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 NCLP19338 710 aaKnown RBP7.56□□□□□ -1.2
SMAD4-208ENST00000589706 ETFBP38117 255 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 APOBRQ0VD83 1088 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 NFE2L2Q16236 605 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 NBPF8Q3BBV2 869 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 PCNX4Q63HM2 1172 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 SLITRK4Q8IW52 837 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 FAM43AQ8N2R8 423 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 NKD1Q969G9 470 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 POP1Q99575 1024 aaKnown RBP7.56□□□□□ -1.2
SMAD4-208ENST00000589706 MUC3BQ9H195 1237 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 RBSNQ9H1K0 784 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 TMEM39AQ9NV64 488 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 PRR12Q9ULL5 1215 aa7.56□□□□□ -1.2
SMAD4-208ENST00000589706 NPHP3Q7Z494 1330 aa7.55□□□□□ -1.2
SMAD4-208ENST00000589706 RBM10P98175 930 aaKnown RBP7.55□□□□□ -1.2
SMAD4-208ENST00000589706 CTBSQ01459 385 aa7.55□□□□□ -1.2
SMAD4-208ENST00000589706 SDE2Q6IQ49 451 aa7.55□□□□□ -1.2
SMAD4-208ENST00000589706 ZNF746Q6NUN9 644 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-208ENST00000589706 FAM196AQ6ZSG2 479 aa7.55□□□□□ -1.2
SMAD4-208ENST00000589706 ANKS3Q6ZW76 656 aa7.55□□□□□ -1.2
SMAD4-208ENST00000589706 TRIM42Q8IWZ5 723 aa7.55□□□□□ -1.2
SMAD4-208ENST00000589706 CPLX3Q8WVH0 158 aa7.55□□□□□ -1.2
SMAD4-208ENST00000589706 SENP2Q9HC62 589 aa7.55□□□□□ -1.2
SMAD4-208ENST00000589706 DNAJB12Q9NXW2 375 aaKnown RBP7.55□□□□□ -1.2
SMAD4-208ENST00000589706 METP08581 1390 aa7.55□□□□□ -1.2
SMAD4-208ENST00000589706 ROBO2Q9HCK4 1378 aa7.55□□□□□ -1.2
SMAD4-208ENST00000589706 ANKRD62A6NC57 917 aa7.54□□□□□ -1.2
SMAD4-208ENST00000589706 K7ELQ4 463 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-208ENST00000589706 SMNDC1O75940 238 aaKnown RBP eCLIP7.54□□□□□ -1.2
SMAD4-208ENST00000589706 TRIM37O94972 964 aa7.54□□□□□ -1.2
SMAD4-208ENST00000589706 APBA3O96018 575 aa7.54□□□□□ -1.2
SMAD4-208ENST00000589706 EIF2AK2P19525 551 aaKnown RBP7.54□□□□□ -1.2
SMAD4-208ENST00000589706 CRKP46108 304 aa7.54□□□□□ -1.2
SMAD4-208ENST00000589706 ZNF157P51786 506 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-208ENST00000589706 PPP2R3AQ06190 1150 aa7.54□□□□□ -1.2
SMAD4-208ENST00000589706 SERINC3Q13530 473 aa7.54□□□□□ -1.2
SMAD4-208ENST00000589706 FOXR1Q6PIV2 292 aa7.54□□□□□ -1.2
SMAD4-208ENST00000589706 SYT9Q86SS6 491 aa7.54□□□□□ -1.2
SMAD4-208ENST00000589706 CCDC84Q86UT8 332 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms