RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 TTC6Q86TZ1 520 aa23.85■■□□□ 1.41
DNMT1-216ENST00000588952 TBC1D10CQ8IV04 446 aa23.85■■□□□ 1.41
DNMT1-216ENST00000588952 STK11IPQ8N1F8 1099 aa23.85■■□□□ 1.41
DNMT1-216ENST00000588952 SLC44A5Q8NCS7 719 aa23.85■■□□□ 1.41
DNMT1-216ENST00000588952 PI4KBQ9UBF8 816 aa23.85■■□□□ 1.41
DNMT1-216ENST00000588952 FZD1Q9UP38 647 aa23.85■■□□□ 1.41
DNMT1-216ENST00000588952 ROBO3Q96MS0 1386 aa23.85■■□□□ 1.41
DNMT1-216ENST00000588952 CYP21A2P08686 494 aa23.84■■□□□ 1.41
DNMT1-216ENST00000588952 MIGA2Q7L4E1 593 aa23.84■■□□□ 1.41
DNMT1-216ENST00000588952 METTL16Q86W50 562 aaKnown RBP23.84■■□□□ 1.41
DNMT1-216ENST00000588952 RBM46Q8TBY0 533 aaKnown RBP23.84■■□□□ 1.41
DNMT1-216ENST00000588952 EHD4Q9H223 541 aa23.84■■□□□ 1.41
DNMT1-216ENST00000588952 INCENPQ9NQS7 918 aa23.84■■□□□ 1.41
DNMT1-216ENST00000588952 CTNNA3Q9UI47 895 aa23.84■■□□□ 1.41
DNMT1-216ENST00000588952 ANAPC4Q9UJX5 808 aa23.84■■□□□ 1.41
DNMT1-216ENST00000588952 SLC27A2O14975 620 aa23.83■■□□□ 1.41
DNMT1-216ENST00000588952 TOMM70O94826 608 aa23.83■■□□□ 1.41
DNMT1-216ENST00000588952 CREB3L3Q68CJ9 461 aa23.83■■□□□ 1.41
DNMT1-216ENST00000588952 SMC1BQ8NDV3 1235 aa23.83■■□□□ 1.41
DNMT1-216ENST00000588952 MAP3K10Q02779 954 aa23.82■■□□□ 1.4
DNMT1-216ENST00000588952 C16orf86Q6ZW13 317 aa23.82■■□□□ 1.4
DNMT1-216ENST00000588952 AMOTL1Q8IY63 956 aa23.82■■□□□ 1.4
DNMT1-216ENST00000588952 SERPINB13Q9UIV8 391 aa23.82■■□□□ 1.4
DNMT1-216ENST00000588952 ZNF213O14771 459 aa23.81■■□□□ 1.4
DNMT1-216ENST00000588952 RRP1BQ14684 758 aaKnown RBP23.81■■□□□ 1.4
DNMT1-216ENST00000588952 IMMTQ16891 758 aaKnown RBP23.81■■□□□ 1.4
DNMT1-216ENST00000588952 SUPT20HL1Q3ZLR7 823 aa23.81■■□□□ 1.4
DNMT1-216ENST00000588952 NKX2-3Q8TAU0 364 aa23.81■■□□□ 1.4
DNMT1-216ENST00000588952 PASKQ96RG2 1323 aa23.81■■□□□ 1.4
DNMT1-216ENST00000588952 EPB41L2O43491 1005 aaKnown RBP23.8■■□□□ 1.4
DNMT1-216ENST00000588952 TBC1D12O60347 775 aa23.8■■□□□ 1.4
DNMT1-216ENST00000588952 SHMT1P34896 483 aa23.8■■□□□ 1.4
DNMT1-216ENST00000588952 HSPA4P34932 840 aa23.8■■□□□ 1.4
DNMT1-216ENST00000588952 CDK8P49336 464 aa23.8■■□□□ 1.4
DNMT1-216ENST00000588952 STOX1Q6ZVD7 989 aa23.8■■□□□ 1.4
DNMT1-216ENST00000588952 FOXP4Q8IVH2 680 aaPredicted RBP23.8■■□□□ 1.4
DNMT1-216ENST00000588952 RASEFQ8IZ41 740 aa23.8■■□□□ 1.4
DNMT1-216ENST00000588952 CRACR2BQ8N4Y2 399 aaPredicted RBP23.8■■□□□ 1.4
DNMT1-216ENST00000588952 ZNF408Q9H9D4 720 aa23.8■■□□□ 1.4
DNMT1-216ENST00000588952 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.8■■□□□ 1.4
DNMT1-216ENST00000588952 PAPPA2Q9BXP8 1791 aa23.8■■□□□ 1.4
DNMT1-216ENST00000588952 PRKG1Q13976 671 aa23.79■■□□□ 1.4
DNMT1-216ENST00000588952 MOB2Q70IA6 237 aa23.79■■□□□ 1.4
DNMT1-216ENST00000588952 KCNB2Q92953 911 aa23.79■■□□□ 1.4
DNMT1-216ENST00000588952 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.79■■□□□ 1.4
DNMT1-216ENST00000588952 HERC5Q9UII4 1024 aaKnown RBP23.79■■□□□ 1.4
DNMT1-216ENST00000588952 NEDD4P46934 1319 aa23.79■■□□□ 1.4
DNMT1-216ENST00000588952 PHF20L1A8MW92 1017 aa23.78■■□□□ 1.4
DNMT1-216ENST00000588952 PRDM1O75626 825 aa23.78■■□□□ 1.4
DNMT1-216ENST00000588952 SHROOM1Q2M3G4 852 aaPredicted RBP23.78■■□□□ 1.4
DNMT1-216ENST00000588952 STAG1Q8WVM7 1258 aa23.78■■□□□ 1.4
DNMT1-216ENST00000588952 USP2O75604 605 aaPredicted RBP23.77■■□□□ 1.4
DNMT1-216ENST00000588952 CELF2O95319 508 aaKnown RBP23.77■■□□□ 1.4
DNMT1-216ENST00000588952 FGRP09769 529 aa23.77■■□□□ 1.4
DNMT1-216ENST00000588952 COL9A3Q14050 684 aaPredicted RBP23.77■■□□□ 1.4
DNMT1-216ENST00000588952 AKNAD1Q5T1N1 836 aa23.77■■□□□ 1.4
DNMT1-216ENST00000588952 CST9Q5W186 159 aa23.77■■□□□ 1.4
DNMT1-216ENST00000588952 DCAF15Q66K64 600 aa23.77■■□□□ 1.4
DNMT1-216ENST00000588952 TATDN1Q6P1N9 297 aa23.77■■□□□ 1.4
DNMT1-216ENST00000588952 TRPM7Q96QT4 1865 aa23.77■■□□□ 1.4
DNMT1-216ENST00000588952 OTOFQ9HC10 1997 aa23.76■■□□□ 1.39
DNMT1-216ENST00000588952 EIF5BO60841 1220 aaKnown RBP23.76■■□□□ 1.39
DNMT1-216ENST00000588952 RASA1P20936 1047 aa23.76■■□□□ 1.39
DNMT1-216ENST00000588952 JAG1P78504 1218 aa23.76■■□□□ 1.39
DNMT1-216ENST00000588952 HOOK2Q96ED9 719 aa23.76■■□□□ 1.39
DNMT1-216ENST00000588952 TRIM34Q9BYJ4 488 aa23.76■■□□□ 1.39
DNMT1-216ENST00000588952 ZNF341Q9BYN7 854 aa23.76■■□□□ 1.39
DNMT1-216ENST00000588952 SWAP70Q9UH65 585 aa23.76■■□□□ 1.39
DNMT1-216ENST00000588952 SNX14Q9Y5W7 946 aa23.76■■□□□ 1.39
DNMT1-216ENST00000588952 E7EWF7 191 aa23.75■■□□□ 1.39
DNMT1-216ENST00000588952 SLC3A2P08195 630 aaKnown RBP23.75■■□□□ 1.39
DNMT1-216ENST00000588952 NF2P35240 595 aa23.75■■□□□ 1.39
DNMT1-216ENST00000588952 FSTL1Q12841 308 aa23.75■■□□□ 1.39
DNMT1-216ENST00000588952 ZNF112Q9UJU3 913 aa23.75■■□□□ 1.39
DNMT1-216ENST00000588952 ORC4O43929 436 aa23.74■■□□□ 1.39
DNMT1-216ENST00000588952 INPP5BP32019 993 aa23.74■■□□□ 1.39
DNMT1-216ENST00000588952 ADCK5Q3MIX3 580 aa23.74■■□□□ 1.39
DNMT1-216ENST00000588952 KLRG1Q96E93 195 aa23.74■■□□□ 1.39
DNMT1-216ENST00000588952 ANGEL1Q9UNK9 670 aaKnown RBP23.74■■□□□ 1.39
DNMT1-216ENST00000588952 MYH8P13535 1937 aa23.74■■□□□ 1.39
DNMT1-216ENST00000588952 GDF11O95390 407 aa23.73■■□□□ 1.39
DNMT1-216ENST00000588952 AKR1B1P15121 316 aa23.73■■□□□ 1.39
DNMT1-216ENST00000588952 PDE4BQ07343 736 aa23.73■■□□□ 1.39
DNMT1-216ENST00000588952 TSGA10IPQ3SY00 556 aa23.73■■□□□ 1.39
DNMT1-216ENST00000588952 RRP12Q5JTH9 1297 aaKnown RBP23.73■■□□□ 1.39
DNMT1-216ENST00000588952 RNF20Q5VTR2 975 aa23.73■■□□□ 1.39
DNMT1-216ENST00000588952 MFSD6Q6ZSS7 791 aa23.73■■□□□ 1.39
DNMT1-216ENST00000588952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.73■■□□□ 1.39
DNMT1-216ENST00000588952 WRNIP1Q96S55 665 aa23.73■■□□□ 1.39
DNMT1-216ENST00000588952 MKNK2Q9HBH9 465 aa23.73■■□□□ 1.39
DNMT1-216ENST00000588952 GBA2Q9HCG7 927 aaPredicted RBP23.73■■□□□ 1.39
DNMT1-216ENST00000588952 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.73■■□□□ 1.39
DNMT1-216ENST00000588952 PPP1R12BO60237 982 aaPredicted RBP23.72■■□□□ 1.39
DNMT1-216ENST00000588952 TTLL12Q14166 644 aaPredicted RBP23.72■■□□□ 1.39
DNMT1-216ENST00000588952 MAP3K11Q16584 847 aa23.72■■□□□ 1.39
DNMT1-216ENST00000588952 RNF41Q9H4P4 317 aaPredicted RBP23.72■■□□□ 1.39
DNMT1-216ENST00000588952 TAOK2Q9UL54 1235 aa23.72■■□□□ 1.39
DNMT1-216ENST00000588952 B4E1Z4 1266 aa23.71■■□□□ 1.39
DNMT1-216ENST00000588952 UBE2Q2LH0YL09 131 aa23.71■■□□□ 1.39
DNMT1-216ENST00000588952 MCCP23508 829 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms