RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 AKNAD1Q5T1N1 836 aa26.8■■□□□ 1.88
ACTN4-210ENST00000588618 RALYLQ86SE5 291 aaKnown RBP26.8■■□□□ 1.88
ACTN4-210ENST00000588618 ZNF287Q9HBT7 754 aa26.8■■□□□ 1.88
ACTN4-210ENST00000588618 ROBO3Q96MS0 1386 aa26.8■■□□□ 1.88
ACTN4-210ENST00000588618 DCPSQ96C86 337 aaKnown RBP26.79■■□□□ 1.88
ACTN4-210ENST00000588618 TRIM34Q9BYJ4 488 aa26.79■■□□□ 1.88
ACTN4-210ENST00000588618 DDTLA6NHG4 134 aaPredicted RBP26.79■■□□□ 1.88
ACTN4-210ENST00000588618 POTECB2RU33 542 aa26.79■■□□□ 1.88
ACTN4-210ENST00000588618 PCP11498 1178 aaKnown RBP26.79■■□□□ 1.88
ACTN4-210ENST00000588618 VEGFAP15692 232 aaPredicted RBP26.79■■□□□ 1.88
ACTN4-210ENST00000588618 CASTP20810 708 aaKnown RBP26.79■■□□□ 1.88
ACTN4-210ENST00000588618 STAG1Q8WVM7 1258 aa26.79■■□□□ 1.88
ACTN4-210ENST00000588618 DYNLL2Q96FJ2 89 aa26.79■■□□□ 1.88
ACTN4-210ENST00000588618 TM6SF1Q9BZW5 370 aa26.79■■□□□ 1.88
ACTN4-210ENST00000588618 CNNM2Q9H8M5 875 aa26.79■■□□□ 1.88
ACTN4-210ENST00000588618 ZSWIM6Q9HCJ5 1215 aa26.79■■□□□ 1.88
ACTN4-210ENST00000588618 PI4KBQ9UBF8 816 aa26.79■■□□□ 1.88
ACTN4-210ENST00000588618 SLURP2P0DP57 97 aa26.78■■□□□ 1.88
ACTN4-210ENST00000588618 RASA3Q14644 834 aa26.78■■□□□ 1.88
ACTN4-210ENST00000588618 CRACR2BQ8N4Y2 399 aaPredicted RBP26.78■■□□□ 1.88
ACTN4-210ENST00000588618 NCOA7Q8NI08 942 aa26.78■■□□□ 1.88
ACTN4-210ENST00000588618 ZNF526Q8TF50 670 aaPredicted RBP26.78■■□□□ 1.88
ACTN4-210ENST00000588618 NEK1Q96PY6 1258 aa26.78■■□□□ 1.88
ACTN4-210ENST00000588618 CSRNP1Q96S65 589 aa26.78■■□□□ 1.88
ACTN4-210ENST00000588618 SERPINB13Q9UIV8 391 aa26.78■■□□□ 1.88
ACTN4-210ENST00000588618 MYH8P13535 1937 aa26.77■■□□□ 1.88
ACTN4-210ENST00000588618 RABEP1Q15276 862 aa26.77■■□□□ 1.88
ACTN4-210ENST00000588618 CDAN1Q8IWY9 1227 aa26.77■■□□□ 1.88
ACTN4-210ENST00000588618 TMEM39BQ9GZU3 492 aa26.77■■□□□ 1.88
ACTN4-210ENST00000588618 PITPNM2Q9BZ72 1349 aa26.77■■□□□ 1.88
ACTN4-210ENST00000588618 ATRNL1Q5VV63 1379 aa26.77■■□□□ 1.88
ACTN4-210ENST00000588618 COL2A1P02458 1487 aaPredicted RBP26.77■■□□□ 1.88
ACTN4-210ENST00000588618 CD2BP2O95400 341 aaKnown RBP26.76■■□□□ 1.88
ACTN4-210ENST00000588618 HMGB1P09429 215 aaKnown RBP26.76■■□□□ 1.88
ACTN4-210ENST00000588618 RRP12Q5JTH9 1297 aaKnown RBP26.76■■□□□ 1.88
ACTN4-210ENST00000588618 SLC44A5Q8NCS7 719 aa26.76■■□□□ 1.88
ACTN4-210ENST00000588618 ZC3H15Q8WU90 426 aaKnown RBP26.76■■□□□ 1.88
ACTN4-210ENST00000588618 KRT23Q9C075 422 aa26.76■■□□□ 1.88
ACTN4-210ENST00000588618 DEFB129Q9H1M3 183 aa26.76■■□□□ 1.88
ACTN4-210ENST00000588618 RRAGCQ9HB90 399 aa26.76■■□□□ 1.88
ACTN4-210ENST00000588618 MKNK2Q9HBH9 465 aa26.76■■□□□ 1.88
ACTN4-210ENST00000588618 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.76■■□□□ 1.88
ACTN4-210ENST00000588618 FGRP09769 529 aa26.76■■□□□ 1.87
ACTN4-210ENST00000588618 BLOC1S2Q6QNY1 142 aa26.76■■□□□ 1.87
ACTN4-210ENST00000588618 MB21D2Q8IYB1 491 aaPredicted RBP26.76■■□□□ 1.87
ACTN4-210ENST00000588618 PRDM1O75626 825 aa26.75■■□□□ 1.87
ACTN4-210ENST00000588618 SULF1Q8IWU6 871 aa26.75■■□□□ 1.87
ACTN4-210ENST00000588618 TCEANC2Q96MN5 208 aa26.75■■□□□ 1.87
ACTN4-210ENST00000588618 EHD4Q9H223 541 aa26.75■■□□□ 1.87
ACTN4-210ENST00000588618 PGAP2Q9UHJ9 254 aa26.75■■□□□ 1.87
ACTN4-210ENST00000588618 B4E1Z4 1266 aa26.74■■□□□ 1.87
ACTN4-210ENST00000588618 NEK4P51957 841 aa26.74■■□□□ 1.87
ACTN4-210ENST00000588618 RUFY3Q7L099 469 aa26.74■■□□□ 1.87
ACTN4-210ENST00000588618 CLEC11AQ9Y240 323 aa26.74■■□□□ 1.87
ACTN4-210ENST00000588618 CYP46A1Q9Y6A2 500 aa26.74■■□□□ 1.87
ACTN4-210ENST00000588618 GABPAQ06546 454 aa26.73■■□□□ 1.87
ACTN4-210ENST00000588618 C16orf86Q6ZW13 317 aa26.73■■□□□ 1.87
ACTN4-210ENST00000588618 FOXP4Q8IVH2 680 aaPredicted RBP26.73■■□□□ 1.87
ACTN4-210ENST00000588618 TTC14Q96N46 770 aa26.73■■□□□ 1.87
ACTN4-210ENST00000588618 SWAP70Q9UH65 585 aa26.73■■□□□ 1.87
ACTN4-210ENST00000588618 PPP2R3BQ9Y5P8 575 aa26.73■■□□□ 1.87
ACTN4-210ENST00000588618 RPS6KB1P23443 525 aa26.73■■□□□ 1.87
ACTN4-210ENST00000588618 CHST3Q7LGC8 479 aa26.73■■□□□ 1.87
ACTN4-210ENST00000588618 ESR2Q92731 530 aa26.73■■□□□ 1.87
ACTN4-210ENST00000588618 DNAJC18Q9H819 358 aa26.73■■□□□ 1.87
ACTN4-210ENST00000588618 TAOK2Q9UL54 1235 aa26.73■■□□□ 1.87
ACTN4-210ENST00000588618 ANTXR2P58335 489 aa26.72■■□□□ 1.87
ACTN4-210ENST00000588618 CYB5R4Q7L1T6 521 aa26.72■■□□□ 1.87
ACTN4-210ENST00000588618 RANBP6O60518 1105 aaKnown RBP26.71■■□□□ 1.87
ACTN4-210ENST00000588618 CDK8P49336 464 aa26.71■■□□□ 1.87
ACTN4-210ENST00000588618 ZNF444Q8N0Y2 327 aaPredicted RBP26.71■■□□□ 1.87
ACTN4-210ENST00000588618 HOOK2Q96ED9 719 aa26.71■■□□□ 1.87
ACTN4-210ENST00000588618 HERC5Q9UII4 1024 aaKnown RBP26.71■■□□□ 1.87
ACTN4-210ENST00000588618 ORC4O43929 436 aa26.7■■□□□ 1.87
ACTN4-210ENST00000588618 MCM5P33992 734 aa26.7■■□□□ 1.87
ACTN4-210ENST00000588618 NT5C2P49902 561 aa26.7■■□□□ 1.87
ACTN4-210ENST00000588618 EXOSC10Q01780 885 aaKnown RBP26.7■■□□□ 1.87
ACTN4-210ENST00000588618 KRT26Q7Z3Y9 468 aa26.7■■□□□ 1.87
ACTN4-210ENST00000588618 TEPSINQ96N21 525 aa26.7■■□□□ 1.87
ACTN4-210ENST00000588618 LRRC2Q9BYS8 371 aa26.7■■□□□ 1.87
ACTN4-210ENST00000588618 FAM196BA6NMK8 535 aa26.7■■□□□ 1.86
ACTN4-210ENST00000588618 ST18O60284 1047 aa26.7■■□□□ 1.86
ACTN4-210ENST00000588618 KDM4AO75164 1064 aa26.7■■□□□ 1.86
ACTN4-210ENST00000588618 FGD1P98174 961 aa26.7■■□□□ 1.86
ACTN4-210ENST00000588618 DHX32Q7L7V1 743 aaKnown RBP26.7■■□□□ 1.86
ACTN4-210ENST00000588618 IL27Q8NEV9 243 aa26.7■■□□□ 1.86
ACTN4-210ENST00000588618 ZSWIM5Q9P217 1185 aa26.7■■□□□ 1.86
ACTN4-210ENST00000588618 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.69■■□□□ 1.861e-7■■■■□ 20.4
ACTN4-210ENST00000588618 NMRK2Q9NPI5 230 aa26.69■■□□□ 1.86
ACTN4-210ENST00000588618 TSPY2A6NKD2 308 aa26.68■■□□□ 1.86
ACTN4-210ENST00000588618 ANP32AP39687 249 aaKnown RBP26.68■■□□□ 1.86
ACTN4-210ENST00000588618 METTL16Q86W50 562 aaKnown RBP26.68■■□□□ 1.86
ACTN4-210ENST00000588618 RASA1P20936 1047 aa26.68■■□□□ 1.86
ACTN4-210ENST00000588618 GPHNQ9NQX3 736 aaPredicted RBP26.68■■□□□ 1.86
ACTN4-210ENST00000588618 PDRG1Q9NUG6 133 aa26.68■■□□□ 1.86
ACTN4-210ENST00000588618 TSPY3P0CV98 308 aa26.67■■□□□ 1.86
ACTN4-210ENST00000588618 TSPY8P0CW00 308 aa26.67■■□□□ 1.86
ACTN4-210ENST00000588618 SHMT1P34896 483 aa26.67■■□□□ 1.86
ACTN4-210ENST00000588618 SART3Q15020 963 aaKnown RBP26.67■■□□□ 1.86
ACTN4-210ENST00000588618 SUPT20HL1Q3ZLR7 823 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms