RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TCP10Q12799 353 aa13.38□□□□□ -0.27
VMP1-207ENST00000588131 BECN1Q14457 450 aa13.38□□□□□ -0.27
VMP1-207ENST00000588131 TBC1D10BQ4KMP7 808 aaPredicted RBP13.38□□□□□ -0.27
VMP1-207ENST00000588131 CYB5R4Q7L1T6 521 aa13.38□□□□□ -0.27
VMP1-207ENST00000588131 DHX32Q7L7V1 743 aaKnown RBP13.38□□□□□ -0.27
VMP1-207ENST00000588131 SAMD7Q7Z3H4 446 aa13.38□□□□□ -0.27
VMP1-207ENST00000588131 RALYLQ86SE5 291 aaKnown RBP13.38□□□□□ -0.27
VMP1-207ENST00000588131 LARP6Q9BRS8 491 aaKnown RBP13.38□□□□□ -0.27
VMP1-207ENST00000588131 LRRC2Q9BYS8 371 aa13.38□□□□□ -0.27
VMP1-207ENST00000588131 RNF41Q9H4P4 317 aaPredicted RBP13.38□□□□□ -0.27
VMP1-207ENST00000588131 GPRC5DQ9NZD1 345 aa13.38□□□□□ -0.27
VMP1-207ENST00000588131 K7ELQ4 463 aaPredicted RBP13.37□□□□□ -0.27
VMP1-207ENST00000588131 PRC1O43663 620 aa13.37□□□□□ -0.27
VMP1-207ENST00000588131 PRDM1O75626 825 aa13.37□□□□□ -0.27
VMP1-207ENST00000588131 TRDNQ13061 729 aa13.37□□□□□ -0.27
VMP1-207ENST00000588131 TOB2Q14106 344 aaPredicted RBP13.37□□□□□ -0.27
VMP1-207ENST00000588131 RRP12Q5JTH9 1297 aaKnown RBP13.37□□□□□ -0.27
VMP1-207ENST00000588131 Q6ZUG5 572 aa13.37□□□□□ -0.27
VMP1-207ENST00000588131 SH3BP5LQ7L8J4 393 aa13.37□□□□□ -0.27
VMP1-207ENST00000588131 AMOTL1Q8IY63 956 aa13.37□□□□□ -0.27
VMP1-207ENST00000588131 SLC44A5Q8NCS7 719 aa13.37□□□□□ -0.27
VMP1-207ENST00000588131 ALDH8A1Q9H2A2 487 aaPredicted RBP13.37□□□□□ -0.27
VMP1-207ENST00000588131 CNNM2Q9H8M5 875 aa13.37□□□□□ -0.27
VMP1-207ENST00000588131 TOMM22Q9NS69 142 aa13.37□□□□□ -0.27
VMP1-207ENST00000588131 TMOD2Q9NZR1 351 aa13.37□□□□□ -0.27
VMP1-207ENST00000588131 ASTN2O75129 1339 aaPredicted RBP13.37□□□□□ -0.27
VMP1-207ENST00000588131 CNTNAP1P78357 1384 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 DDTLA6NHG4 134 aaPredicted RBP13.36□□□□□ -0.27
VMP1-207ENST00000588131 TCP10L2B9ZVM9 353 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 H7C1D1 291 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 ORC4O43929 436 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 KDM4AO75164 1064 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 ENTPD3O75355 529 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 SLC3A2P08195 630 aaKnown RBP13.36□□□□□ -0.27
VMP1-207ENST00000588131 MCM5P33992 734 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 EPS15P42566 896 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 KIF4BQ2VIQ3 1234 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 TRPM4Q8TD43 1214 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 KRT23Q9C075 422 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 VEZTQ9HBM0 779 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 GPHNQ9NQX3 736 aaPredicted RBP13.36□□□□□ -0.27
VMP1-207ENST00000588131 ZSWIM5Q9P217 1185 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 WDR19Q8NEZ3 1342 aa13.36□□□□□ -0.27
VMP1-207ENST00000588131 COL2A1P02458 1487 aaPredicted RBP13.36□□□□□ -0.27
VMP1-207ENST00000588131 ABCB7O75027 752 aa13.35□□□□□ -0.27
VMP1-207ENST00000588131 LARGE1O95461 756 aa13.35□□□□□ -0.27
VMP1-207ENST00000588131 SLURP2P0DP57 97 aa13.35□□□□□ -0.27
VMP1-207ENST00000588131 PCP11498 1178 aaKnown RBP13.35□□□□□ -0.27
VMP1-207ENST00000588131 C16orf86Q6ZW13 317 aa13.35□□□□□ -0.27
VMP1-207ENST00000588131 TTC6Q86TZ1 520 aa13.35□□□□□ -0.27
VMP1-207ENST00000588131 IL27Q8NEV9 243 aa13.35□□□□□ -0.27
VMP1-207ENST00000588131 AGXT2Q9BYV1 514 aa13.35□□□□□ -0.27
VMP1-207ENST00000588131 ATRNL1Q5VV63 1379 aa13.34□□□□□ -0.27
VMP1-207ENST00000588131 MYO1BO43795 1136 aa13.34□□□□□ -0.27
VMP1-207ENST00000588131 RANBP6O60518 1105 aaKnown RBP13.34□□□□□ -0.27
VMP1-207ENST00000588131 CDK8P49336 464 aa13.34□□□□□ -0.27
VMP1-207ENST00000588131 MCM2P49736 904 aa13.34□□□□□ -0.27
VMP1-207ENST00000588131 GABPAQ06546 454 aa13.34□□□□□ -0.27
VMP1-207ENST00000588131 PDE4BQ07343 736 aa13.34□□□□□ -0.27
VMP1-207ENST00000588131 ESR2Q92731 530 aa13.34□□□□□ -0.27
VMP1-207ENST00000588131 BRF1Q92994 677 aa13.34□□□□□ -0.27
VMP1-207ENST00000588131 TMX3Q96JJ7 454 aa13.34□□□□□ -0.27
VMP1-207ENST00000588131 ZKSCAN3Q9BRR0 538 aa13.34□□□□□ -0.27
VMP1-207ENST00000588131 TPCN1Q9ULQ1 816 aa13.34□□□□□ -0.27
VMP1-207ENST00000588131 SCAF8Q9UPN6 1271 aaKnown RBP13.34□□□□□ -0.27
VMP1-207ENST00000588131 ZC3H4Q9UPT8 1303 aaKnown RBP13.34□□□□□ -0.27
VMP1-207ENST00000588131 SH2B2O14492 632 aaPredicted RBP13.33□□□□□ -0.28
VMP1-207ENST00000588131 HLA-DOAP06340 250 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 RASA1P20936 1047 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 HIRAP54198 1017 aaPredicted RBP13.33□□□□□ -0.28
VMP1-207ENST00000588131 FGD1P98174 961 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 FAM47AQ5JRC9 791 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 FKBP1CQ5VVH2 108 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 ZSCAN29Q8IWY8 852 aaPredicted RBP13.33□□□□□ -0.28
VMP1-207ENST00000588131 CDAN1Q8IWY9 1227 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 FAM151AQ8WW52 585 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 EHD4Q9H223 541 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 DHX36Q9H2U1 1008 aaKnown RBP13.33□□□□□ -0.28
VMP1-207ENST00000588131 DNAJC18Q9H819 358 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 SENP2Q9HC62 589 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 SERPINB13Q9UIV8 391 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 HACL1Q9UJ83 578 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 LIMCH1Q9UPQ0 1083 aa13.33□□□□□ -0.28
VMP1-207ENST00000588131 FAM196BA6NMK8 535 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 LMOD1P29536 600 aaPredicted RBP13.32□□□□□ -0.28
VMP1-207ENST00000588131 APOBRQ0VD83 1088 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 ANKRD1Q15327 319 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 ME3Q16798 604 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 FAM83AQ86UY5 434 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 FBXL16Q8N461 479 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 IGDCC4Q8TDY8 1250 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
VMP1-207ENST00000588131 TMEM87BQ96K49 555 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 TMEM39BQ9GZU3 492 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 MKNK2Q9HBH9 465 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 PGAP2Q9UHJ9 254 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 MYH8P13535 1937 aa13.32□□□□□ -0.28
VMP1-207ENST00000588131 GLTPD2A6NH11 291 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms