RNA–Protein interactions for RNA: ENST00000587739.1

CHAF1A-206, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-206ENST00000587739 ZSCAN29Q8IWY8 852 aaPredicted RBP11.74□□□□□ -0.53
CHAF1A-206ENST00000587739 CNKSR2Q8WXI2 1034 aa11.74□□□□□ -0.53
CHAF1A-206ENST00000587739 HHIPL1Q96JK4 782 aa11.74□□□□□ -0.53
CHAF1A-206ENST00000587739 CRNKL1Q9BZJ0 848 aaKnown RBP11.74□□□□□ -0.53
CHAF1A-206ENST00000587739 HELLSQ9NRZ9 838 aa11.74□□□□□ -0.53
CHAF1A-206ENST00000587739 WBP1LQ9NX94 342 aa11.74□□□□□ -0.53
CHAF1A-206ENST00000587739 TACC3Q9Y6A5 838 aa11.74□□□□□ -0.53
CHAF1A-206ENST00000587739 WDR33Q9C0J8 1336 aaKnown RBP11.74□□□□□ -0.53
CHAF1A-206ENST00000587739 MYH1P12882 1939 aa11.74□□□□□ -0.53
CHAF1A-206ENST00000587739 BAZ2AQ9UIF9 1905 aaKnown RBP11.74□□□□□ -0.53
CHAF1A-206ENST00000587739 PATL2C9JE40 543 aaKnown RBP11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 USP17L12C9JPN9 530 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 USP17L21D6R901 530 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 PPP1R12BO60237 982 aaPredicted RBP11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 COL2A1P02458 1487 aaPredicted RBP11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 CHMLP26374 656 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 NF2P35240 595 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 GABPAQ06546 454 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 TTLL12Q14166 644 aaPredicted RBP11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 MCMDC2Q4G0Z9 681 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 CERS3Q8IU89 383 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 FOXP4Q8IVH2 680 aaPredicted RBP11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 IFNL3Q8IZI9 196 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 PAPPA2Q9BXP8 1791 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 ZNF341Q9BYN7 854 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 DHX36Q9H2U1 1008 aaKnown RBP11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 ATP8A2Q9NTI2 1148 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 MCM9Q9NXL9 1143 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 PI4KBQ9UBF8 816 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 SNCAIPQ9Y6H5 919 aa11.73□□□□□ -0.53
CHAF1A-206ENST00000587739 HSPA8P11142 646 aaKnown RBP11.72□□□□□ -0.53
CHAF1A-206ENST00000587739 IREB2P48200 963 aaKnown RBP11.72□□□□□ -0.53
CHAF1A-206ENST00000587739 ZNF157P51786 506 aaPredicted RBP11.72□□□□□ -0.53
CHAF1A-206ENST00000587739 VGLL4Q14135 290 aa11.72□□□□□ -0.53
CHAF1A-206ENST00000587739 C12orf60Q5U649 245 aa11.72□□□□□ -0.53
CHAF1A-206ENST00000587739 CWC27Q6UX04 472 aaKnown RBP11.72□□□□□ -0.53
CHAF1A-206ENST00000587739 RASAL3Q86YV0 1011 aa11.72□□□□□ -0.53
CHAF1A-206ENST00000587739 DYNLL2Q96FJ2 89 aa11.72□□□□□ -0.53
CHAF1A-206ENST00000587739 CAPNS2Q96L46 248 aa11.72□□□□□ -0.53
CHAF1A-206ENST00000587739 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
CHAF1A-206ENST00000587739 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
CHAF1A-206ENST00000587739 THSD7BQ9C0I4 1608 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 UNCXA6NJT0 531 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 SLC10A3P09131 477 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 HSPD1P10809 573 aaKnown RBP11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 SHMT1P34896 483 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 SBK1Q52WX2 424 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 TATDN1Q6P1N9 297 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 CCDC84Q86UT8 332 aaPredicted RBP11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 ANKRD13AQ8IZ07 590 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 SLC44A5Q8NCS7 719 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 NKX2-3Q8TAU0 364 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 SLC10A4Q96EP9 437 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 WRNIP1Q96S55 665 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 ELP3Q9H9T3 547 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 INCENPQ9NQS7 918 aa11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.71□□□□□ -0.53
CHAF1A-206ENST00000587739 DDX60LQ5H9U9 1706 aaKnown RBP11.71□□□□□ -0.54
CHAF1A-206ENST00000587739 OTOFQ9HC10 1997 aa11.7□□□□□ -0.54
CHAF1A-206ENST00000587739 FGAP02671 866 aa11.7□□□□□ -0.54
CHAF1A-206ENST00000587739 POLR3DP05423 398 aaPredicted RBP11.7□□□□□ -0.54
CHAF1A-206ENST00000587739 ALX1Q15699 326 aa11.7□□□□□ -0.54
CHAF1A-206ENST00000587739 LRRFIP1Q32MZ4 808 aaKnown RBP11.7□□□□□ -0.54
CHAF1A-206ENST00000587739 BMP2KLQ5H9B9 411 aa11.7□□□□□ -0.54
CHAF1A-206ENST00000587739 NOL9Q5SY16 702 aaKnown RBP11.7□□□□□ -0.54
CHAF1A-206ENST00000587739 SPRYD7Q5W111 196 aa11.7□□□□□ -0.54
CHAF1A-206ENST00000587739 DCAF15Q66K64 600 aa11.7□□□□□ -0.54
CHAF1A-206ENST00000587739 GIMAP6Q6P9H5 292 aa11.7□□□□□ -0.54
CHAF1A-206ENST00000587739 EHD4Q9H223 541 aa11.7□□□□□ -0.54
CHAF1A-206ENST00000587739 CTNND1O60716 968 aaKnown RBP11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 PTPRAP18433 802 aa11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 GNAT2P19087 354 aa11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 GUCY1A2P33402 732 aa11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 CAP2P40123 477 aa11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 KIF23Q02241 960 aaPredicted RBP11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 TTC6Q86TZ1 520 aa11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 CCDC102AQ96A19 550 aa11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 HOOK2Q96ED9 719 aa11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 WNK4Q96J92 1243 aa11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 MS4A4AQ96JQ5 239 aa11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 HERC5Q9UII4 1024 aaKnown RBP11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 SERPINB13Q9UIV8 391 aa11.69□□□□□ -0.54
CHAF1A-206ENST00000587739 CCDC171Q6TFL3 1326 aa11.68□□□□□ -0.54
CHAF1A-206ENST00000587739 SGSM2O43147 1006 aa11.68□□□□□ -0.54
CHAF1A-206ENST00000587739 GDF11O95390 407 aa11.68□□□□□ -0.54
CHAF1A-206ENST00000587739 APPP05067 770 aa11.68□□□□□ -0.54
CHAF1A-206ENST00000587739 CDK8P49336 464 aa11.68□□□□□ -0.54
CHAF1A-206ENST00000587739 MAP2K1Q02750 393 aaPredicted RBP11.68□□□□□ -0.54
CHAF1A-206ENST00000587739 PTH1RQ03431 593 aa11.68□□□□□ -0.54
CHAF1A-206ENST00000587739 MOGSQ13724 837 aa11.68□□□□□ -0.54
CHAF1A-206ENST00000587739 SIAH1Q8IUQ4 282 aa11.68□□□□□ -0.54
CHAF1A-206ENST00000587739 OPTNQ96CV9 577 aa11.68□□□□□ -0.54
CHAF1A-206ENST00000587739 PTPN18Q99952 460 aa11.68□□□□□ -0.54
CHAF1A-206ENST00000587739 NBPF3Q9H094 633 aa11.68□□□□□ -0.54
CHAF1A-206ENST00000587739 SPDYE5A6NIY4 337 aa11.67□□□□□ -0.54
CHAF1A-206ENST00000587739 MINDY4BA8MYZ0 360 aa11.67□□□□□ -0.54
CHAF1A-206ENST00000587739 HIP1O00291 1037 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms