RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 PCP11498 1178 aaKnown RBP22.79■■□□□ 1.24
MBD1-216ENST00000587605 CHRNDQ07001 517 aa22.79■■□□□ 1.24
MBD1-216ENST00000587605 PPARAQ07869 468 aa22.79■■□□□ 1.24
MBD1-216ENST00000587605 NCBP1Q09161 790 aaKnown RBP22.79■■□□□ 1.24
MBD1-216ENST00000587605 SMAP1Q8IYB5 467 aaPredicted RBP22.79■■□□□ 1.24
MBD1-216ENST00000587605 UBAC1Q9BSL1 405 aa22.79■■□□□ 1.24
MBD1-216ENST00000587605 DACH1Q9UI36 760 aa22.79■■□□□ 1.24
MBD1-216ENST00000587605 TACC3Q9Y6A5 838 aa22.79■■□□□ 1.24
MBD1-216ENST00000587605 LOC102724428A0A0B4J2F2 783 aa22.78■■□□□ 1.24
MBD1-216ENST00000587605 PTPREP23469 700 aa22.78■■□□□ 1.24
MBD1-216ENST00000587605 SIK1P57059 783 aa22.78■■□□□ 1.24
MBD1-216ENST00000587605 RRP12Q5JTH9 1297 aaKnown RBP22.78■■□□□ 1.24
MBD1-216ENST00000587605 KANK3Q6NY19 840 aa22.78■■□□□ 1.24
MBD1-216ENST00000587605 ESR2Q92731 530 aa22.78■■□□□ 1.24
MBD1-216ENST00000587605 INCENPQ9NQS7 918 aa22.78■■□□□ 1.24
MBD1-216ENST00000587605 TOMM22Q9NS69 142 aa22.78■■□□□ 1.24
MBD1-216ENST00000587605 CGNQ9P2M7 1197 aaKnown RBP22.78■■□□□ 1.24
MBD1-216ENST00000587605 NIP7Q9Y221 180 aaKnown RBP eCLIP22.78■■□□□ 1.24
MBD1-216ENST00000587605 USP27XA6NNY8 438 aa22.78■■□□□ 1.24
MBD1-216ENST00000587605 PRKAB2O43741 272 aa22.78■■□□□ 1.24
MBD1-216ENST00000587605 CYP7A1P22680 504 aa22.78■■□□□ 1.24
MBD1-216ENST00000587605 METTL16Q86W50 562 aaKnown RBP22.78■■□□□ 1.24
MBD1-216ENST00000587605 ZNF654Q8IZM8 581 aa22.78■■□□□ 1.24
MBD1-216ENST00000587605 FANCBQ8NB91 859 aa22.78■■□□□ 1.24
MBD1-216ENST00000587605 RNF26Q9BY78 433 aaPredicted RBP22.78■■□□□ 1.24
MBD1-216ENST00000587605 RGL2O15211 777 aa22.77■■□□□ 1.24
MBD1-216ENST00000587605 XBP1P17861 261 aa22.77■■□□□ 1.24
MBD1-216ENST00000587605 PNOCQ13519 176 aa22.77■■□□□ 1.24
MBD1-216ENST00000587605 DDB1Q16531 1140 aa22.77■■□□□ 1.24
MBD1-216ENST00000587605 PPP4R3BQ5MIZ7 849 aa22.77■■□□□ 1.24
MBD1-216ENST00000587605 ARMCX5Q6P1M9 558 aa22.77■■□□□ 1.24
MBD1-216ENST00000587605 CLIC6Q96NY7 704 aa22.77■■□□□ 1.24
MBD1-216ENST00000587605 FAM177BA6PVY3 158 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 BTBD18B2RXH4 712 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 LMOD1P29536 600 aaPredicted RBP22.76■■□□□ 1.23
MBD1-216ENST00000587605 UBE4AQ14139 1066 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 LONRF3Q496Y0 759 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 CLEC4GQ6UXB4 293 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 TRIML1Q8N9V2 468 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 SMARCC1Q92922 1105 aaPredicted RBP22.76■■□□□ 1.23
MBD1-216ENST00000587605 CCDC34Q96HJ3 373 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 FEZ1Q99689 392 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 FBXO2Q9UK22 296 aaPredicted RBP22.76■■□□□ 1.23
MBD1-216ENST00000587605 SPATA31A1Q5TZJ5 1347 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 NRAPQ86VF7 1730 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 ZNF831Q5JPB2 1677 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 MAGEB6P1A0A0J9YX57 407 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 UBASH3AP57075 661 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 STK11IPQ8N1F8 1099 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 ZNF592Q92610 1267 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 HSD3B7Q9H2F3 369 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 A0A1B0GUL6 1792 aa22.76■■□□□ 1.23
MBD1-216ENST00000587605 ROBO1Q9Y6N7 1651 aa22.75■■□□□ 1.23
MBD1-216ENST00000587605 SERPINC1P01008 464 aa22.75■■□□□ 1.23
MBD1-216ENST00000587605 TOB1P50616 345 aaPredicted RBP22.75■■□□□ 1.23
MBD1-216ENST00000587605 MDM2Q00987 491 aaPredicted RBP22.75■■□□□ 1.23
MBD1-216ENST00000587605 NT5DC1Q5TFE4 455 aa22.75■■□□□ 1.23
MBD1-216ENST00000587605 MLKLQ8NB16 471 aa22.75■■□□□ 1.23
MBD1-216ENST00000587605 SRPRBQ9Y5M8 271 aaKnown RBP22.75■■□□□ 1.23
MBD1-216ENST00000587605 SNAP23O00161 211 aa22.74■■□□□ 1.23
MBD1-216ENST00000587605 BMP15O95972 392 aa22.74■■□□□ 1.23
MBD1-216ENST00000587605 AKAP17AQ02040 695 aaKnown RBP22.74■■□□□ 1.23
MBD1-216ENST00000587605 CT47A1Q5JQC4 288 aaPredicted RBP22.74■■□□□ 1.23
MBD1-216ENST00000587605 BRIP1Q9BX63 1249 aa22.74■■□□□ 1.23
MBD1-216ENST00000587605 PCDHA5Q9Y5H7 936 aa22.74■■□□□ 1.23
MBD1-216ENST00000587605 GUCY1A2P33402 732 aa22.74■■□□□ 1.23
MBD1-216ENST00000587605 POSTNQ15063 836 aa22.74■■□□□ 1.23
MBD1-216ENST00000587605 SEC23AQ15436 765 aa22.74■■□□□ 1.23
MBD1-216ENST00000587605 E4F1Q66K89 784 aaPredicted RBP22.74■■□□□ 1.23
MBD1-216ENST00000587605 FCHSD1Q86WN1 690 aa22.74■■□□□ 1.23
MBD1-216ENST00000587605 ANKRD18AQ8IVF6 992 aa22.74■■□□□ 1.23
MBD1-216ENST00000587605 ERO1AQ96HE7 468 aa22.74■■□□□ 1.23
MBD1-216ENST00000587605 RBM28Q9NW13 759 aaKnown RBP22.74■■□□□ 1.23
MBD1-216ENST00000587605 TRMT1Q9NXH9 659 aaKnown RBP22.74■■□□□ 1.23
MBD1-216ENST00000587605 MYH6P13533 1939 aa22.74■■□□□ 1.23
MBD1-216ENST00000587605 CALM1P0DP23 149 aa22.73■■□□□ 1.23
MBD1-216ENST00000587605 CALM2P0DP24 149 aa22.73■■□□□ 1.23
MBD1-216ENST00000587605 CALM3P0DP25 149 aa22.73■■□□□ 1.23
MBD1-216ENST00000587605 TMED8Q6PL24 325 aaPredicted RBP22.73■■□□□ 1.23
MBD1-216ENST00000587605 VSTM4Q8IW00 320 aa22.73■■□□□ 1.23
MBD1-216ENST00000587605 MIGA1Q8NAN2 632 aa22.73■■□□□ 1.23
MBD1-216ENST00000587605 PPP1R13BQ96KQ4 1090 aa22.73■■□□□ 1.23
MBD1-216ENST00000587605 MYH14Q7Z406 1995 aaKnown RBP22.73■■□□□ 1.23
MBD1-216ENST00000587605 SEMA3EO15041 775 aa22.72■■□□□ 1.23
MBD1-216ENST00000587605 SF3B3Q15393 1217 aaKnown RBP22.72■■□□□ 1.23
MBD1-216ENST00000587605 KCNJ14Q9UNX9 436 aa22.72■■□□□ 1.23
MBD1-216ENST00000587605 DUOX1Q9NRD9 1551 aa22.72■■□□□ 1.23
MBD1-216ENST00000587605 COL5A3P25940 1745 aaPredicted RBP22.72■■□□□ 1.23
MBD1-216ENST00000587605 ITPK1Q13572 414 aa22.72■■□□□ 1.23
MBD1-216ENST00000587605 CAVIN4Q5BKX8 364 aa22.72■■□□□ 1.23
MBD1-216ENST00000587605 ZKSCAN3Q9BRR0 538 aa22.72■■□□□ 1.23
MBD1-216ENST00000587605 BSDC1Q9NW68 430 aaPredicted RBP22.72■■□□□ 1.23
MBD1-216ENST00000587605 RAI14Q9P0K7 980 aa22.72■■□□□ 1.23
MBD1-216ENST00000587605 DLEC1Q9Y238 1755 aa22.72■■□□□ 1.23
MBD1-216ENST00000587605 TNKSO95271 1327 aa22.71■■□□□ 1.23
MBD1-216ENST00000587605 PDS5AQ29RF7 1337 aaKnown RBP22.71■■□□□ 1.23
MBD1-216ENST00000587605 ATP1A3P13637 1013 aa22.71■■□□□ 1.23
MBD1-216ENST00000587605 CFAP100Q494V2 611 aa22.71■■□□□ 1.23
MBD1-216ENST00000587605 ISM2Q6H9L7 571 aa22.71■■□□□ 1.23
MBD1-216ENST00000587605 NUP133Q8WUM0 1156 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms