RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 RPS26P62854 115 aaKnown RBP7.62□□□□□ -1.19
VMP1-205ENST00000587470 PTPN11Q06124 597 aaPredicted RBP7.62□□□□□ -1.19
VMP1-205ENST00000587470 INPP5AQ14642 412 aa7.62□□□□□ -1.19
VMP1-205ENST00000587470 CCDC85BQ15834 202 aaPredicted RBP7.62□□□□□ -1.19
VMP1-205ENST00000587470 DNAJC14Q6Y2X3 702 aaPredicted RBP7.62□□□□□ -1.19
VMP1-205ENST00000587470 ARHGAP27Q6ZUM4 889 aa7.62□□□□□ -1.19
VMP1-205ENST00000587470 HDXQ7Z353 690 aa7.62□□□□□ -1.19
VMP1-205ENST00000587470 PLD6Q8N2A8 252 aaKnown RBP7.62□□□□□ -1.19
VMP1-205ENST00000587470 FAM181AQ8N9Y4 354 aa7.62□□□□□ -1.19
VMP1-205ENST00000587470 ZNF507Q8TCN5 953 aa7.62□□□□□ -1.19
VMP1-205ENST00000587470 RNF19AQ9NV58 838 aa7.62□□□□□ -1.19
VMP1-205ENST00000587470 PARP2Q9UGN5 583 aa7.62□□□□□ -1.19
VMP1-205ENST00000587470 OXCT1P55809 520 aa7.61□□□□□ -1.19
VMP1-205ENST00000587470 LRFN4Q6PJG9 635 aa7.61□□□□□ -1.19
VMP1-205ENST00000587470 NPAS4Q8IUM7 802 aa7.61□□□□□ -1.19
VMP1-205ENST00000587470 PRDM10Q9NQV6 1147 aa7.61□□□□□ -1.19
VMP1-205ENST00000587470 VAV3Q9UKW4 847 aa7.61□□□□□ -1.19
VMP1-205ENST00000587470 SNCAIPQ9Y6H5 919 aa7.61□□□□□ -1.19
VMP1-205ENST00000587470 IFI16Q16666 785 aaKnown RBP7.6□□□□□ -1.19
VMP1-205ENST00000587470 LCE1DQ5T752 114 aa7.6□□□□□ -1.19
VMP1-205ENST00000587470 CYFIP1Q7L576 1253 aa7.6□□□□□ -1.19
VMP1-205ENST00000587470 FAM214BQ7L5A3 538 aa7.6□□□□□ -1.19
VMP1-205ENST00000587470 GAL3ST3Q96A11 431 aa7.6□□□□□ -1.19
VMP1-205ENST00000587470 GTF2IRD1Q9UHL9 959 aa7.6□□□□□ -1.19
VMP1-205ENST00000587470 IGF2BP3O00425 579 aaKnown RBP eCLIP7.59□□□□□ -1.19
VMP1-205ENST00000587470 CEACAM5P06731 702 aa7.59□□□□□ -1.19
VMP1-205ENST00000587470 LMNB1P20700 586 aa7.59□□□□□ -1.19
VMP1-205ENST00000587470 DAB2P98082 770 aa7.59□□□□□ -1.19
VMP1-205ENST00000587470 XPCQ01831 940 aaPredicted RBP7.59□□□□□ -1.19
VMP1-205ENST00000587470 PRKCQQ04759 706 aa7.59□□□□□ -1.19
VMP1-205ENST00000587470 BNIP3Q12983 259 aa7.59□□□□□ -1.19
VMP1-205ENST00000587470 PSMD2Q13200 908 aa7.59□□□□□ -1.19
VMP1-205ENST00000587470 SPRED2Q7Z698 418 aa7.59□□□□□ -1.19
VMP1-205ENST00000587470 UBE3DQ7Z6J8 389 aa7.59□□□□□ -1.19
VMP1-205ENST00000587470 PLPPR2Q96GM1 343 aa7.59□□□□□ -1.19
VMP1-205ENST00000587470 HEXIM2Q96MH2 286 aaKnown RBP7.59□□□□□ -1.19
VMP1-205ENST00000587470 WNT10AQ9GZT5 417 aa7.59□□□□□ -1.19
VMP1-205ENST00000587470 TMEM265A0A087WTH1 108 aa7.58□□□□□ -1.2
VMP1-205ENST00000587470 PRAMEF27A3QJZ7 478 aa7.58□□□□□ -1.2
VMP1-205ENST00000587470 LRIG2O94898 1065 aa7.58□□□□□ -1.2
VMP1-205ENST00000587470 RLBP1P12271 317 aa7.58□□□□□ -1.2
VMP1-205ENST00000587470 OGFOD2Q6N063 350 aa7.58□□□□□ -1.2
VMP1-205ENST00000587470 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.58□□□□□ -1.2
VMP1-205ENST00000587470 AGMOQ6ZNB7 445 aa7.58□□□□□ -1.2
VMP1-205ENST00000587470 PLAGL2Q9UPG8 496 aa7.58□□□□□ -1.2
VMP1-205ENST00000587470 SNX11Q9Y5W9 270 aa7.58□□□□□ -1.2
VMP1-205ENST00000587470 U3KQE9 123 aa7.58□□□□□ -1.2
VMP1-205ENST00000587470 ERCC3P19447 782 aa7.57□□□□□ -1.2
VMP1-205ENST00000587470 LIG3P49916 1009 aa7.57□□□□□ -1.2
VMP1-205ENST00000587470 TAF1CQ15572 869 aaPredicted RBP7.57□□□□□ -1.2
VMP1-205ENST00000587470 WIPI1Q5MNZ9 446 aaPredicted RBP7.57□□□□□ -1.2
VMP1-205ENST00000587470 MEI1Q5TIA1 1274 aa7.57□□□□□ -1.2
VMP1-205ENST00000587470 ZNF574Q6ZN55 896 aaPredicted RBP7.57□□□□□ -1.2
VMP1-205ENST00000587470 ARMCX6Q7L4S7 300 aa7.57□□□□□ -1.2
VMP1-205ENST00000587470 TMC4Q7Z404 712 aa7.57□□□□□ -1.2
VMP1-205ENST00000587470 HRASLS5Q96KN8 279 aa7.57□□□□□ -1.2
VMP1-205ENST00000587470 KRTAP4-7Q9BYR0 210 aa7.57□□□□□ -1.2
VMP1-205ENST00000587470 PCDHB5Q9Y5E4 795 aa7.57□□□□□ -1.2
VMP1-205ENST00000587470 CD8BP10966 210 aa7.56□□□□□ -1.2
VMP1-205ENST00000587470 CAP2P40123 477 aa7.56□□□□□ -1.2
VMP1-205ENST00000587470 ST13P50502 369 aaKnown RBP7.56□□□□□ -1.2
VMP1-205ENST00000587470 ETF1P62495 437 aaKnown RBP7.56□□□□□ -1.2
VMP1-205ENST00000587470 FZD5Q13467 585 aa7.56□□□□□ -1.2
VMP1-205ENST00000587470 PLCL1Q15111 1095 aa7.56□□□□□ -1.2
VMP1-205ENST00000587470 MAP3K11Q16584 847 aa7.56□□□□□ -1.2
VMP1-205ENST00000587470 AOC3Q16853 763 aa7.56□□□□□ -1.2
VMP1-205ENST00000587470 FBXO33Q7Z6M2 555 aa7.56□□□□□ -1.2
VMP1-205ENST00000587470 NOC4LQ9BVI4 516 aaKnown RBP7.56□□□□□ -1.2
VMP1-205ENST00000587470 FOXQ1Q9C009 403 aa7.56□□□□□ -1.2
VMP1-205ENST00000587470 TNKS2Q9H2K2 1166 aa7.56□□□□□ -1.2
VMP1-205ENST00000587470 TACC3Q9Y6A5 838 aa7.56□□□□□ -1.2
VMP1-205ENST00000587470 EOMESO95936 686 aa7.55□□□□□ -1.2
VMP1-205ENST00000587470 ITIH2P19823 946 aa7.55□□□□□ -1.2
VMP1-205ENST00000587470 CDK8P49336 464 aa7.55□□□□□ -1.2
VMP1-205ENST00000587470 JAG1P78504 1218 aa7.55□□□□□ -1.2
VMP1-205ENST00000587470 SEPT6Q14141 434 aa7.55□□□□□ -1.2
VMP1-205ENST00000587470 SLBPQ14493 270 aaKnown RBP eCLIP7.55□□□□□ -1.2
VMP1-205ENST00000587470 HID1Q8IV36 788 aa7.55□□□□□ -1.2
VMP1-205ENST00000587470 MFSD2AQ8NA29 543 aa7.55□□□□□ -1.2
VMP1-205ENST00000587470 MIR1-1HGQ9H1L0 117 aa7.55□□□□□ -1.2
VMP1-205ENST00000587470 FBRSQ9HAH7 460 aa7.55□□□□□ -1.2
VMP1-205ENST00000587470 USP31Q70CQ4 1352 aa7.55□□□□□ -1.2
VMP1-205ENST00000587470 GFRA2O00451 464 aa7.54□□□□□ -1.2
VMP1-205ENST00000587470 FUT4P22083 530 aa7.54□□□□□ -1.2
VMP1-205ENST00000587470 CCDC27Q2M243 656 aa7.54□□□□□ -1.2
VMP1-205ENST00000587470 POU5F2Q8N7G0 328 aa7.54□□□□□ -1.2
VMP1-205ENST00000587470 GZF1Q9H116 711 aaPredicted RBP7.54□□□□□ -1.2
VMP1-205ENST00000587470 PRDM5Q9NQX1 630 aaPredicted RBP7.54□□□□□ -1.2
VMP1-205ENST00000587470 GNAT3A8MTJ3 354 aa7.53□□□□□ -1.2
VMP1-205ENST00000587470 PAPLNO95428 1278 aa7.53□□□□□ -1.2
VMP1-205ENST00000587470 CTSHP09668 335 aa7.53□□□□□ -1.2
VMP1-205ENST00000587470 JUNBP17275 347 aaPredicted RBP7.53□□□□□ -1.2
VMP1-205ENST00000587470 GRK4P32298 578 aa7.53□□□□□ -1.2
VMP1-205ENST00000587470 NKG7Q16617 165 aa7.53□□□□□ -1.2
VMP1-205ENST00000587470 TSNAXIP1Q2TAA8 658 aa7.53□□□□□ -1.2
VMP1-205ENST00000587470 ZNF792Q3KQV3 632 aa7.53□□□□□ -1.2
VMP1-205ENST00000587470 ASIC4Q96FT7 647 aa7.53□□□□□ -1.2
VMP1-205ENST00000587470 FAM161BQ96MY7 647 aa7.53□□□□□ -1.2
VMP1-205ENST00000587470 MAPK8IP1Q9UQF2 711 aa7.53□□□□□ -1.2
VMP1-205ENST00000587470 SORBS3O60504 671 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms