RNA–Protein interactions for RNA: ENST00000587449.1

CELF4-206, Transcript of CUGBP Elav-like family member 4, human

TSL 3

Gene CELF4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-206	ENST00000587449	SPP2	Q13103	211 aa		13.82	□□□□□ -0.2
CELF4-206	ENST00000587449	PUM3	Q15397	648 aa	Known RBP	13.82	□□□□□ -0.2
CELF4-206	ENST00000587449	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.82	□□□□□ -0.2
CELF4-206	ENST00000587449	ALDH1L1	O75891	902 aa		13.81	□□□□□ -0.2
CELF4-206	ENST00000587449	LDHB	P07195	334 aa	Known RBP	13.81	□□□□□ -0.2
CELF4-206	ENST00000587449	HMGCS2	P54868	508 aa		13.81	□□□□□ -0.2
CELF4-206	ENST00000587449	MAP3K12	Q12852	859 aa		13.81	□□□□□ -0.2
CELF4-206	ENST00000587449	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.81	□□□□□ -0.2
CELF4-206	ENST00000587449	ZNF280C	Q8ND82	737 aa		13.81	□□□□□ -0.2
CELF4-206	ENST00000587449	SUCLG2	Q96I99	432 aa		13.81	□□□□□ -0.2
CELF4-206	ENST00000587449	TBC1D2	Q9BYX2	928 aa		13.81	□□□□□ -0.2
CELF4-206	ENST00000587449	TBC1D12	O60347	775 aa		13.8	□□□□□ -0.2
CELF4-206	ENST00000587449	MAPK4	P31152	587 aa		13.8	□□□□□ -0.2
CELF4-206	ENST00000587449	ATN1	P54259	1190 aa	Predicted RBP	13.8	□□□□□ -0.2
CELF4-206	ENST00000587449	RTP1	P59025	263 aa		13.8	□□□□□ -0.2
CELF4-206	ENST00000587449	PDE3A	Q14432	1141 aa		13.8	□□□□□ -0.2
CELF4-206	ENST00000587449	CCL14	Q16627	93 aa		13.8	□□□□□ -0.2
CELF4-206	ENST00000587449	RABL6	Q3YEC7	729 aa	Predicted RBP	13.8	□□□□□ -0.2
CELF4-206	ENST00000587449	SH3D19	Q5HYK7	790 aa		13.8	□□□□□ -0.2
CELF4-206	ENST00000587449	GPRC5A	Q8NFJ5	357 aa		13.8	□□□□□ -0.2
CELF4-206	ENST00000587449	DOCK3	Q8IZD9	2030 aa		13.8	□□□□□ -0.2
CELF4-206	ENST00000587449	RGS2	P41220	211 aa		13.79	□□□□□ -0.2
CELF4-206	ENST00000587449	MORN1	Q5T089	497 aa		13.79	□□□□□ -0.2
CELF4-206	ENST00000587449	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.79	□□□□□ -0.2
CELF4-206	ENST00000587449	APBA2	Q99767	749 aa		13.79	□□□□□ -0.2
CELF4-206	ENST00000587449	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.79	□□□□□ -0.2
CELF4-206	ENST00000587449	TXNRD2	Q9NNW7	524 aa		13.79	□□□□□ -0.2
CELF4-206	ENST00000587449	GAK	O14976	1311 aa		13.79	□□□□□ -0.2
CELF4-206	ENST00000587449	SALL1	Q9NSC2	1324 aa		13.79	□□□□□ -0.2
CELF4-206	ENST00000587449	DNM1L	O00429	736 aa		13.78	□□□□□ -0.2
CELF4-206	ENST00000587449	VAMP4	O75379	141 aa		13.78	□□□□□ -0.2
CELF4-206	ENST00000587449	CENPB	P07199	599 aa	Predicted RBP	13.78	□□□□□ -0.2
CELF4-206	ENST00000587449	IRX3	P78415	501 aa	Predicted RBP	13.78	□□□□□ -0.2
CELF4-206	ENST00000587449	GRIN2C	Q14957	1233 aa		13.78	□□□□□ -0.2
CELF4-206	ENST00000587449	LPAR1	Q92633	364 aa		13.78	□□□□□ -0.2
CELF4-206	ENST00000587449	BAD	Q92934	168 aa		13.78	□□□□□ -0.2
CELF4-206	ENST00000587449	BICC1	Q9H694	974 aa	Known RBP	13.78	□□□□□ -0.2
CELF4-206	ENST00000587449	DDX4	Q9NQI0	724 aa	Known RBP	13.78	□□□□□ -0.2
CELF4-206	ENST00000587449	UTY	O14607	1347 aa		13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	MSC	O60682	206 aa		13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	PEX10	O60683	326 aa		13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	SLC5A1	P13866	664 aa		13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	HOXA7	P31268	230 aa	Predicted RBP	13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	IL16	Q14005	1332 aa		13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	CCDC27	Q2M243	656 aa		13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	ANKRD44	Q8N8A2	993 aa		13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	LPIN2	Q92539	896 aa		13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	SYNGAP1	Q96PV0	1343 aa		13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	P2RX7	Q99572	595 aa	Known RBP	13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	SRCIN1	Q9C0H9	1055 aa		13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	DDX20	Q9UHI6	824 aa	Known RBP	13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	ATP11B	Q9Y2G3	1177 aa		13.77	□□□□□ -0.21
CELF4-206	ENST00000587449	USP17L5	A8MUK1	530 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	HERVK_113	P62684	666 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	SNX17	Q15036	470 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	GPR142	Q7Z601	462 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	PLEKHH3	Q7Z736	793 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	WWC1	Q8IX03	1113 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	KLHDC4	Q8TBB5	520 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	ADAMTS19	Q8TE59	1207 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	FAM163A	Q96GL9	167 aa	Predicted RBP	13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	ASB2	Q96Q27	587 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	PORCN	Q9H237	461 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	RBPJL	Q9UBG7	517 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	PTPRF	P10586	1907 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	PLXNB2	O15031	1838 aa		13.76	□□□□□ -0.21
CELF4-206	ENST00000587449	CAP2	P40123	477 aa		13.75	□□□□□ -0.21
CELF4-206	ENST00000587449	ERVK-9	P63128	1117 aa		13.75	□□□□□ -0.21
CELF4-206	ENST00000587449	ERVK-24	P63145	666 aa		13.75	□□□□□ -0.21
CELF4-206	ENST00000587449	MAP2K5	Q13163	448 aa		13.75	□□□□□ -0.21
CELF4-206	ENST00000587449	PICALM	Q13492	652 aa		13.75	□□□□□ -0.21
CELF4-206	ENST00000587449	MFSD14C	Q5VZR4	134 aa		13.75	□□□□□ -0.21
CELF4-206	ENST00000587449	SLC39A5	Q6ZMH5	540 aa		13.75	□□□□□ -0.21
CELF4-206	ENST00000587449	UHRF1	Q96T88	793 aa	Predicted RBP	13.75	□□□□□ -0.21
CELF4-206	ENST00000587449	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.75	□□□□□ -0.21
CELF4-206	ENST00000587449	PDLIM7	Q9NR12	457 aa		13.75	□□□□□ -0.21
CELF4-206	ENST00000587449	MAST2	Q6P0Q8	1798 aa		13.75	□□□□□ -0.21
CELF4-206	ENST00000587449	PIEZO1	Q92508	2521 aa		13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	DOCK1	Q14185	1865 aa		13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	PHIP	Q8WWQ0	1821 aa		13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	LOC285556	D6RIA3	1793 aa		13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	FANCI	Q9NVI1	1328 aa		13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	TRIM43B	A6NCK2	446 aa		13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	FAM196B	A6NMK8	535 aa		13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	ZBTB22	O15209	634 aa		13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	NPM3	O75607	178 aa	Known RBP	13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	RRP1B	Q14684	758 aa	Known RBP	13.74	□□□□□ -0.21
CELF4-206	ENST00000587449		Q3C1V9	767 aa		13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	SLC4A10	Q6U841	1118 aa		13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	CCAR1	Q8IX12	1150 aa	Known RBP	13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	RNPC3	Q96LT9	517 aa	Known RBP	13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	WDR18	Q9BV38	432 aa		13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	AS3MT	Q9HBK9	375 aa		13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	GNL3L	Q9NVN8	582 aa	Known RBP	13.74	□□□□□ -0.21
CELF4-206	ENST00000587449	FLRT1	Q9NZU1	646 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms