RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 SURF6O75683 361 aaKnown RBP18.68■□□□□ 0.58
PRKCSH-204ENST00000587290 LDHCP07864 332 aa18.68■□□□□ 0.58
PRKCSH-204ENST00000587290 UQCRFS1P1P0C7P4 283 aa18.68■□□□□ 0.58
PRKCSH-204ENST00000587290 GRK4P32298 578 aa18.68■□□□□ 0.58
PRKCSH-204ENST00000587290 PRMT2P55345 433 aa18.68■□□□□ 0.58
PRKCSH-204ENST00000587290 SHROOM1Q2M3G4 852 aaPredicted RBP18.68■□□□□ 0.58
PRKCSH-204ENST00000587290 SSH3Q8TE77 659 aa18.68■□□□□ 0.58
PRKCSH-204ENST00000587290 COL2A1P02458 1487 aaPredicted RBP18.68■□□□□ 0.58
PRKCSH-204ENST00000587290 MYH1P12882 1939 aa18.67■□□□□ 0.58
PRKCSH-204ENST00000587290 CYP2E1P05181 493 aaPredicted RBP18.67■□□□□ 0.58
PRKCSH-204ENST00000587290 FCGRTP55899 365 aa18.67■□□□□ 0.58
PRKCSH-204ENST00000587290 ATP8B2P98198 1209 aa18.67■□□□□ 0.58
PRKCSH-204ENST00000587290 FTSJ3Q8IY81 847 aaKnown RBP18.67■□□□□ 0.58
PRKCSH-204ENST00000587290 SMCR8Q8TEV9 937 aaPredicted RBP18.67■□□□□ 0.58
PRKCSH-204ENST00000587290 TBC1D12O60347 775 aa18.66■□□□□ 0.58
PRKCSH-204ENST00000587290 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
PRKCSH-204ENST00000587290 ZAP70P43403 619 aa18.66■□□□□ 0.58
PRKCSH-204ENST00000587290 SPP2Q13103 211 aa18.66■□□□□ 0.58
PRKCSH-204ENST00000587290 NAA16Q6N069 864 aaPredicted RBP18.66■□□□□ 0.58
PRKCSH-204ENST00000587290 MAPKAPK5Q8IW41 473 aa18.66■□□□□ 0.58
PRKCSH-204ENST00000587290 PIH1D3Q9NQM4 214 aaKnown RBP18.66■□□□□ 0.58
PRKCSH-204ENST00000587290 BIN2Q9UBW5 565 aaPredicted RBP18.66■□□□□ 0.58
PRKCSH-204ENST00000587290 DBNLQ9UJU6 430 aaKnown RBP18.66■□□□□ 0.58
PRKCSH-204ENST00000587290 AGTPBP1Q9UPW5 1226 aa18.66■□□□□ 0.58
PRKCSH-204ENST00000587290 NDUFB9Q9Y6M9 179 aa18.66■□□□□ 0.58
PRKCSH-204ENST00000587290 CCL5P13501 91 aa18.65■□□□□ 0.58
PRKCSH-204ENST00000587290 ELNP15502 786 aa18.65■□□□□ 0.58
PRKCSH-204ENST00000587290 HOXD10P28358 340 aa18.65■□□□□ 0.58
PRKCSH-204ENST00000587290 HMGCS2P54868 508 aa18.65■□□□□ 0.58
PRKCSH-204ENST00000587290 JAG1P78504 1218 aa18.65■□□□□ 0.58
PRKCSH-204ENST00000587290 ANKRD13CQ8N6S4 541 aa18.65■□□□□ 0.58
PRKCSH-204ENST00000587290 CCDC8Q9H0W5 538 aaPredicted RBP18.65■□□□□ 0.58
PRKCSH-204ENST00000587290 GPR108Q9NPR9 543 aa18.65■□□□□ 0.58
PRKCSH-204ENST00000587290 CAP2P40123 477 aa18.64■□□□□ 0.57
PRKCSH-204ENST00000587290 DYNLL1P63167 89 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-204ENST00000587290 HABP4Q5JVS0 413 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-204ENST00000587290 CCDC158Q5M9N0 1113 aa18.64■□□□□ 0.57
PRKCSH-204ENST00000587290 TGFBRAP1Q8WUH2 860 aa18.64■□□□□ 0.57
PRKCSH-204ENST00000587290 NOL10Q9BSC4 688 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-204ENST00000587290 DNAJC18Q9H819 358 aa18.64■□□□□ 0.57
PRKCSH-204ENST00000587290 TAOK2Q9UL54 1235 aa18.64■□□□□ 0.57
PRKCSH-204ENST00000587290 TRIOBPQ9H2D6 2365 aa18.64■□□□□ 0.57
PRKCSH-204ENST00000587290 ZBTB7BO15156 539 aaPredicted RBP18.63■□□□□ 0.57
PRKCSH-204ENST00000587290 FLT3LGP49771 235 aa18.63■□□□□ 0.57
PRKCSH-204ENST00000587290 ZNF280CQ8ND82 737 aa18.63■□□□□ 0.57
PRKCSH-204ENST00000587290 PANK1Q8TE04 598 aa18.63■□□□□ 0.57
PRKCSH-204ENST00000587290 EAF2Q96CJ1 260 aaPredicted RBP18.63■□□□□ 0.57
PRKCSH-204ENST00000587290 RNF208Q9H0X6 261 aa18.63■□□□□ 0.57
PRKCSH-204ENST00000587290 UNC93B1Q9H1C4 597 aa18.63■□□□□ 0.57
PRKCSH-204ENST00000587290 SAP30BPQ9UHR5 308 aaKnown RBP18.63■□□□□ 0.57
PRKCSH-204ENST00000587290 SLC45A1Q9Y2W3 748 aa18.63■□□□□ 0.57
PRKCSH-204ENST00000587290 FLT1P17948 1338 aa18.63■□□□□ 0.57
PRKCSH-204ENST00000587290 PLXNB2O15031 1838 aa18.63■□□□□ 0.57
PRKCSH-204ENST00000587290 TNPO2O14787 897 aaKnown RBP18.62■□□□□ 0.57
PRKCSH-204ENST00000587290 PEX10O60683 326 aa18.62■□□□□ 0.57
PRKCSH-204ENST00000587290 GCC1Q96CN9 775 aa18.62■□□□□ 0.57
PRKCSH-204ENST00000587290 PALD1Q9ULE6 856 aa18.62■□□□□ 0.57
PRKCSH-204ENST00000587290 H0YGN5 161 aa18.61■□□□□ 0.57
PRKCSH-204ENST00000587290 ADCY3O60266 1144 aa18.61■□□□□ 0.57
PRKCSH-204ENST00000587290 GDF11O95390 407 aa18.61■□□□□ 0.57
PRKCSH-204ENST00000587290 MAP4K4O95819 1239 aaPredicted RBP18.61■□□□□ 0.57
PRKCSH-204ENST00000587290 CEP85Q6P2H3 762 aa18.61■□□□□ 0.57
PRKCSH-204ENST00000587290 MIGA1Q8NAN2 632 aa18.61■□□□□ 0.57
PRKCSH-204ENST00000587290 SLAIN1Q8ND83 568 aa18.61■□□□□ 0.57
PRKCSH-204ENST00000587290 EXOC6BQ9Y2D4 811 aa18.61■□□□□ 0.57
PRKCSH-204ENST00000587290 NOP58Q9Y2X3 529 aaKnown RBP18.61■□□□□ 0.57
PRKCSH-204ENST00000587290 USP17L5A8MUK1 530 aa18.6■□□□□ 0.57
PRKCSH-204ENST00000587290 BAG3O95817 575 aa18.6■□□□□ 0.57
PRKCSH-204ENST00000587290 INHAP05111 366 aa18.6■□□□□ 0.57
PRKCSH-204ENST00000587290 PPP4CP60510 307 aa18.6■□□□□ 0.57
PRKCSH-204ENST00000587290 MTMR2Q13614 643 aa18.6■□□□□ 0.57
PRKCSH-204ENST00000587290 PROCA1Q8NCQ7 364 aaPredicted RBP18.6■□□□□ 0.57
PRKCSH-204ENST00000587290 ANTXR1Q9H6X2 564 aa18.6■□□□□ 0.57
PRKCSH-204ENST00000587290 PI4KBQ9UBF8 816 aa18.6■□□□□ 0.57
PRKCSH-204ENST00000587290 HERC5Q9UII4 1024 aaKnown RBP18.6■□□□□ 0.57
PRKCSH-204ENST00000587290 COLQQ9Y215 455 aaPredicted RBP18.6■□□□□ 0.57
PRKCSH-204ENST00000587290 ALPK3Q96L96 1907 aa18.6■□□□□ 0.57
PRKCSH-204ENST00000587290 NAV1Q8NEY1 1877 aa18.59■□□□□ 0.57
PRKCSH-204ENST00000587290 IDH1O75874 414 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-204ENST00000587290 GJB1P08034 283 aa18.59■□□□□ 0.57
PRKCSH-204ENST00000587290 CYP7A1P22680 504 aa18.59■□□□□ 0.57
PRKCSH-204ENST00000587290 GJA8P48165 433 aa18.59■□□□□ 0.57
PRKCSH-204ENST00000587290 UBXN2AP68543 259 aa18.59■□□□□ 0.57
PRKCSH-204ENST00000587290 DIEXFQ68CQ4 756 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-204ENST00000587290 ASCC2Q9H1I8 757 aaPredicted RBP18.59■□□□□ 0.57
PRKCSH-204ENST00000587290 PNMA3Q9UL41 463 aa18.59■□□□□ 0.57
PRKCSH-204ENST00000587290 RANBP2P49792 3224 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-204ENST00000587290 DDX60LQ5H9U9 1706 aaKnown RBP18.58■□□□□ 0.57
PRKCSH-204ENST00000587290 PLCG2P16885 1265 aa18.58■□□□□ 0.56
PRKCSH-204ENST00000587290 FAM110CQ1W6H9 321 aa18.58■□□□□ 0.56
PRKCSH-204ENST00000587290 CRACR2BQ8N4Y2 399 aaPredicted RBP18.58■□□□□ 0.56
PRKCSH-204ENST00000587290 U2AF1L4Q8WU68 220 aaKnown RBP18.58■□□□□ 0.56
PRKCSH-204ENST00000587290 ZNF512BQ96KM6 892 aaPredicted RBP18.58■□□□□ 0.56
PRKCSH-204ENST00000587290 BCL11AQ9H165 835 aa18.58■□□□□ 0.56
PRKCSH-204ENST00000587290 UBE2Q1Q7Z7E8 422 aa18.57■□□□□ 0.56
PRKCSH-204ENST00000587290 AACSQ86V21 672 aa18.57■□□□□ 0.56
PRKCSH-204ENST00000587290 MAGEB6Q8N7X4 407 aa18.57■□□□□ 0.56
PRKCSH-204ENST00000587290 DHX36Q9H2U1 1008 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-204ENST00000587290 IL1RAPL2Q9NP60 686 aa18.57■□□□□ 0.56
PRKCSH-204ENST00000587290 SZT2Q5T011 3432 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms