RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 GOLIM4O00461 696 aa21.5■■□□□ 1.03
TPM4-206ENST00000587201 USP5P45974 858 aa21.5■■□□□ 1.03
TPM4-206ENST00000587201 RRP1P56182 461 aaKnown RBP21.5■■□□□ 1.03
TPM4-206ENST00000587201 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.5■■□□□ 1.03
TPM4-206ENST00000587201 AFG3L2Q9Y4W6 797 aa21.5■■□□□ 1.03
TPM4-206ENST00000587201 SMARCA5O60264 1052 aaPredicted RBP21.49■■□□□ 1.03
TPM4-206ENST00000587201 MOGSQ13724 837 aa21.49■■□□□ 1.03
TPM4-206ENST00000587201 CCDC84Q86UT8 332 aaPredicted RBP21.49■■□□□ 1.03
TPM4-206ENST00000587201 TRIM34Q9BYJ4 488 aa21.49■■□□□ 1.03
TPM4-206ENST00000587201 BOLA2Q9H3K6 86 aa21.49■■□□□ 1.03
TPM4-206ENST00000587201 EFCC1Q9HA90 598 aa21.49■■□□□ 1.03
TPM4-206ENST00000587201 SAP30BPQ9UHR5 308 aaKnown RBP21.49■■□□□ 1.03
TPM4-206ENST00000587201 PALD1Q9ULE6 856 aa21.49■■□□□ 1.03
TPM4-206ENST00000587201 DOCK1Q14185 1865 aa21.49■■□□□ 1.03
TPM4-206ENST00000587201 A0A0G2JLL6 359 aaPredicted RBP21.48■■□□□ 1.03
TPM4-206ENST00000587201 HLA-DOAP06340 250 aa21.48■■□□□ 1.03
TPM4-206ENST00000587201 CAP2P40123 477 aa21.48■■□□□ 1.03
TPM4-206ENST00000587201 SLC9C2Q5TAH2 1124 aa21.48■■□□□ 1.03
TPM4-206ENST00000587201 GADL1Q6ZQY3 521 aa21.48■■□□□ 1.03
TPM4-206ENST00000587201 FASTKD5Q7L8L6 764 aaKnown RBP21.48■■□□□ 1.03
TPM4-206ENST00000587201 PRRT2Q7Z6L0 340 aaPredicted RBP21.48■■□□□ 1.03
TPM4-206ENST00000587201 FOXP4Q8IVH2 680 aaPredicted RBP21.48■■□□□ 1.03
TPM4-206ENST00000587201 CRACR2BQ8N4Y2 399 aaPredicted RBP21.48■■□□□ 1.03
TPM4-206ENST00000587201 TRIM75PA6NK02 468 aa21.47■■□□□ 1.03
TPM4-206ENST00000587201 PDE6AP16499 860 aa21.47■■□□□ 1.03
TPM4-206ENST00000587201 ATP5JP18859 108 aa21.47■■□□□ 1.03
TPM4-206ENST00000587201 ARHGEF6Q15052 776 aa21.47■■□□□ 1.03
TPM4-206ENST00000587201 SLC4A8Q2Y0W8 1093 aa21.47■■□□□ 1.03
TPM4-206ENST00000587201 EDC3Q96F86 508 aaKnown RBP21.47■■□□□ 1.03
TPM4-206ENST00000587201 DCTPP1Q9H773 170 aa21.47■■□□□ 1.03
TPM4-206ENST00000587201 PAG1Q9NWQ8 432 aa21.47■■□□□ 1.03
TPM4-206ENST00000587201 CDK5RAP2Q96SN8 1893 aa21.46■■□□□ 1.03
TPM4-206ENST00000587201 MAGEB6P1A0A0J9YX57 407 aa21.46■■□□□ 1.03
TPM4-206ENST00000587201 SOX10P56693 466 aa21.46■■□□□ 1.03
TPM4-206ENST00000587201 RRP1BQ14684 758 aaKnown RBP21.46■■□□□ 1.03
TPM4-206ENST00000587201 GPAT2Q6NUI2 795 aa21.46■■□□□ 1.03
TPM4-206ENST00000587201 CPA4Q9UI42 421 aa21.46■■□□□ 1.03
TPM4-206ENST00000587201 PTPN22Q9Y2R2 807 aa21.46■■□□□ 1.03
TPM4-206ENST00000587201 FOCADQ5VW36 1801 aa21.45■■□□□ 1.03
TPM4-206ENST00000587201 RGS19P49795 217 aa21.45■■□□□ 1.02
TPM4-206ENST00000587201 CAP1Q01518 475 aa21.45■■□□□ 1.02
TPM4-206ENST00000587201 KIF22Q14807 665 aa21.45■■□□□ 1.02
TPM4-206ENST00000587201 PARK7Q99497 189 aaKnown RBP21.45■■□□□ 1.02
TPM4-206ENST00000587201 RIOK1Q9BRS2 568 aaKnown RBP21.45■■□□□ 1.02
TPM4-206ENST00000587201 ZNF532Q9HCE3 1301 aa21.45■■□□□ 1.02
TPM4-206ENST00000587201 USP17L5A8MUK1 530 aa21.44■■□□□ 1.02
TPM4-206ENST00000587201 C17orf99Q6UX52 265 aa21.44■■□□□ 1.02
TPM4-206ENST00000587201 METTL16Q86W50 562 aaKnown RBP21.44■■□□□ 1.02
TPM4-206ENST00000587201 HAUS7Q99871 368 aa21.44■■□□□ 1.02
TPM4-206ENST00000587201 TBC1D2Q9BYX2 928 aa21.44■■□□□ 1.02
TPM4-206ENST00000587201 DNAJC18Q9H819 358 aa21.44■■□□□ 1.02
TPM4-206ENST00000587201 SIPA1L1O43166 1804 aa21.43■■□□□ 1.02
TPM4-206ENST00000587201 CYP2C8P10632 490 aa21.43■■□□□ 1.02
TPM4-206ENST00000587201 LACTBP83111 547 aaPredicted RBP21.43■■□□□ 1.02
TPM4-206ENST00000587201 SPP2Q13103 211 aa21.43■■□□□ 1.02
TPM4-206ENST00000587201 ZNF280CQ8ND82 737 aa21.43■■□□□ 1.02
TPM4-206ENST00000587201 AS3MTQ9HBK9 375 aa21.43■■□□□ 1.02
TPM4-206ENST00000587201 PCDHB15Q9Y5E8 787 aa21.43■■□□□ 1.02
TPM4-206ENST00000587201 PHIPQ8WWQ0 1821 aa21.43■■□□□ 1.02
TPM4-206ENST00000587201 TCRBV5S4A2TA0A5A2 114 aa21.42■■□□□ 1.02
TPM4-206ENST00000587201 ECM2O94769 699 aaPredicted RBP21.42■■□□□ 1.02
TPM4-206ENST00000587201 MLLT1Q03111 559 aaPredicted RBP21.42■■□□□ 1.02
TPM4-206ENST00000587201 TTC6Q86TZ1 520 aa21.42■■□□□ 1.02
TPM4-206ENST00000587201 CRNKL1Q9BZJ0 848 aaKnown RBP21.42■■□□□ 1.02
TPM4-206ENST00000587201 ARHGAP39Q9C0H5 1083 aa21.42■■□□□ 1.02
TPM4-206ENST00000587201 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.42■■□□□ 1.02
TPM4-206ENST00000587201 ADGRA2Q96PE1 1338 aa21.41■■□□□ 1.02
TPM4-206ENST00000587201 GDF11O95390 407 aa21.41■■□□□ 1.02
TPM4-206ENST00000587201 ASNSP08243 561 aa21.41■■□□□ 1.02
TPM4-206ENST00000587201 CRBNQ96SW2 442 aa21.41■■□□□ 1.02
TPM4-206ENST00000587201 ECHDC1Q9NTX5 307 aa21.41■■□□□ 1.02
TPM4-206ENST00000587201 AGTPBP1Q9UPW5 1226 aa21.41■■□□□ 1.02
TPM4-206ENST00000587201 SLC45A1Q9Y2W3 748 aa21.41■■□□□ 1.02
TPM4-206ENST00000587201 ATAD5Q96QE3 1844 aa21.41■■□□□ 1.02
TPM4-206ENST00000587201 ADD2P35612 726 aa21.4■■□□□ 1.02
TPM4-206ENST00000587201 LCORLQ8N3X6 602 aa21.4■■□□□ 1.02
TPM4-206ENST00000587201 PROCA1Q8NCQ7 364 aaPredicted RBP21.4■■□□□ 1.02
TPM4-206ENST00000587201 GPATCH3Q96I76 525 aa21.4■■□□□ 1.02
TPM4-206ENST00000587201 SERPINB13Q9UIV8 391 aa21.4■■□□□ 1.02
TPM4-206ENST00000587201 MYH1P12882 1939 aa21.39■■□□□ 1.02
TPM4-206ENST00000587201 POLR3DP05423 398 aaPredicted RBP21.39■■□□□ 1.01
TPM4-206ENST00000587201 HMGCS2P54868 508 aa21.39■■□□□ 1.01
TPM4-206ENST00000587201 JAG1P78504 1218 aa21.39■■□□□ 1.01
TPM4-206ENST00000587201 TREML2Q5T2D2 321 aa21.39■■□□□ 1.01
TPM4-206ENST00000587201 EHD4Q9H223 541 aa21.39■■□□□ 1.01
TPM4-206ENST00000587201 GINM1Q9NU53 330 aa21.39■■□□□ 1.01
TPM4-206ENST00000587201 PTPRFP10586 1907 aa21.39■■□□□ 1.01
TPM4-206ENST00000587201 SHROOM1Q2M3G4 852 aaPredicted RBP21.38■■□□□ 1.01
TPM4-206ENST00000587201 SLFNL1Q499Z3 407 aa21.38■■□□□ 1.01
TPM4-206ENST00000587201 ZSCAN25Q6NSZ9 544 aa21.38■■□□□ 1.01
TPM4-206ENST00000587201 SMCR8Q8TEV9 937 aaPredicted RBP21.38■■□□□ 1.01
TPM4-206ENST00000587201 SDR42E1Q8WUS8 393 aa21.38■■□□□ 1.01
TPM4-206ENST00000587201 WDR18Q9BV38 432 aa21.38■■□□□ 1.01
TPM4-206ENST00000587201 ARMT1Q9H993 441 aa21.38■■□□□ 1.01
TPM4-206ENST00000587201 MCM9Q9NXL9 1143 aa21.38■■□□□ 1.01
TPM4-206ENST00000587201 ZBTB21Q9ULJ3 1066 aa21.38■■□□□ 1.01
TPM4-206ENST00000587201 PTCH2Q9Y6C5 1203 aa21.38■■□□□ 1.01
TPM4-206ENST00000587201 FMNL1O95466 1100 aaPredicted RBP21.37■■□□□ 1.01
TPM4-206ENST00000587201 GNRH1P01148 92 aa21.37■■□□□ 1.01
TPM4-206ENST00000587201 BCRP11274 1271 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms