RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 MSCO60682 206 aa16.1■□□□□ 0.17
SMARCA4-211ENST00000586921 CTNND1O60716 968 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-211ENST00000586921 RGS2P41220 211 aa16.1■□□□□ 0.17
SMARCA4-211ENST00000586921 TRIM60Q495X7 471 aa16.1■□□□□ 0.17
SMARCA4-211ENST00000586921 CDC42EP5Q6NZY7 148 aa16.1■□□□□ 0.17
SMARCA4-211ENST00000586921 CCDC84Q86UT8 332 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-211ENST00000586921 LPAR1Q92633 364 aa16.1■□□□□ 0.17
SMARCA4-211ENST00000586921 APBA2Q99767 749 aa16.1■□□□□ 0.17
SMARCA4-211ENST00000586921 FAM198AQ9UFP1 575 aa16.1■□□□□ 0.17
SMARCA4-211ENST00000586921 DDX20Q9UHI6 824 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-211ENST00000586921 LOC285556D6RIA3 1793 aa16.1■□□□□ 0.17
SMARCA4-211ENST00000586921 TRIM43BA6NCK2 446 aa16.09■□□□□ 0.17
SMARCA4-211ENST00000586921 IGFBP4P22692 258 aa16.09■□□□□ 0.17
SMARCA4-211ENST00000586921 EPHB4P54760 987 aa16.09■□□□□ 0.17
SMARCA4-211ENST00000586921 AAK1Q2M2I8 961 aa16.09■□□□□ 0.17
SMARCA4-211ENST00000586921 CCDC57Q2TAC2 916 aa16.09■□□□□ 0.17
SMARCA4-211ENST00000586921 SLC39A5Q6ZMH5 540 aa16.09■□□□□ 0.17
SMARCA4-211ENST00000586921 SH3RF1Q7Z6J0 888 aa16.09■□□□□ 0.17
SMARCA4-211ENST00000586921 FBXO33Q7Z6M2 555 aa16.09■□□□□ 0.17
SMARCA4-211ENST00000586921 CCDC146Q8IYE0 955 aa16.09■□□□□ 0.17
SMARCA4-211ENST00000586921 TRIM43Q96BQ3 446 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-211ENST00000586921 CHD9Q3L8U1 2897 aa16.09■□□□□ 0.17
SMARCA4-211ENST00000586921 GPR37L1O60883 481 aa16.08■□□□□ 0.16
SMARCA4-211ENST00000586921 CNGA1P29973 690 aa16.08■□□□□ 0.16
SMARCA4-211ENST00000586921 FOXO4P98177 505 aa16.08■□□□□ 0.16
SMARCA4-211ENST00000586921 CAVIN4Q5BKX8 364 aa16.08■□□□□ 0.16
SMARCA4-211ENST00000586921 ZFPM1Q8IX07 1006 aa16.08■□□□□ 0.16
SMARCA4-211ENST00000586921 USP6NLQ92738 828 aa16.08■□□□□ 0.16
SMARCA4-211ENST00000586921 DAGLAQ9Y4D2 1042 aa16.08■□□□□ 0.16
SMARCA4-211ENST00000586921 FAM86C2PA6NEL3 165 aa16.07■□□□□ 0.16
SMARCA4-211ENST00000586921 MAPK4P31152 587 aa16.07■□□□□ 0.16
SMARCA4-211ENST00000586921 HMGCS2P54868 508 aa16.07■□□□□ 0.16
SMARCA4-211ENST00000586921 ADGRE1Q14246 886 aa16.07■□□□□ 0.16
SMARCA4-211ENST00000586921 MFSD14CQ5VZR4 134 aa16.07■□□□□ 0.16
SMARCA4-211ENST00000586921 CCAR1Q8IX12 1150 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-211ENST00000586921 GPRC5AQ8NFJ5 357 aa16.07■□□□□ 0.16
SMARCA4-211ENST00000586921 REV3LO60673 3130 aa16.06■□□□□ 0.16
SMARCA4-211ENST00000586921 KBTBD13C9JR72 458 aa16.06■□□□□ 0.16
SMARCA4-211ENST00000586921 KCNQ1P51787 676 aa16.06■□□□□ 0.16
SMARCA4-211ENST00000586921 IRX3P78415 501 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-211ENST00000586921 TFF2Q03403 129 aa16.06■□□□□ 0.16
SMARCA4-211ENST00000586921 SPP2Q13103 211 aa16.06■□□□□ 0.16
SMARCA4-211ENST00000586921 SNX17Q15036 470 aa16.06■□□□□ 0.16
SMARCA4-211ENST00000586921 GJC2Q5T442 439 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-211ENST00000586921 LMBR1LQ6UX01 489 aa16.06■□□□□ 0.16
SMARCA4-211ENST00000586921 ZSCAN29Q8IWY8 852 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-211ENST00000586921 C8orf58Q8NAV2 365 aa16.06■□□□□ 0.16
SMARCA4-211ENST00000586921 C11orf16Q9NQ32 467 aa16.06■□□□□ 0.16
SMARCA4-211ENST00000586921 ZNF853P0CG23 659 aa16.05■□□□□ 0.16
SMARCA4-211ENST00000586921 ITGB8P26012 769 aa16.05■□□□□ 0.16
SMARCA4-211ENST00000586921 FPGSQ05932 587 aa16.05■□□□□ 0.16
SMARCA4-211ENST00000586921 MORN1Q5T089 497 aa16.05■□□□□ 0.16
SMARCA4-211ENST00000586921 GPR142Q7Z601 462 aa16.05■□□□□ 0.16
SMARCA4-211ENST00000586921 ARRDC4Q8NCT1 418 aa16.05■□□□□ 0.16
SMARCA4-211ENST00000586921 STK31Q9BXU1 1019 aa16.05■□□□□ 0.16
SMARCA4-211ENST00000586921 TXNRD2Q9NNW7 524 aa16.05■□□□□ 0.16
SMARCA4-211ENST00000586921 USP40Q9NVE5 1235 aa16.05■□□□□ 0.16
SMARCA4-211ENST00000586921 UTYO14607 1347 aa16.04■□□□□ 0.16
SMARCA4-211ENST00000586921 MYBBP1AQ9BQG0 1328 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-211ENST00000586921 PEX10O60683 326 aa16.04■□□□□ 0.16
SMARCA4-211ENST00000586921 DIXDC1Q155Q3 683 aa16.04■□□□□ 0.16
SMARCA4-211ENST00000586921 CCDC129Q6ZRS4 1044 aa16.04■□□□□ 0.16
SMARCA4-211ENST00000586921 ZNF280CQ8ND82 737 aa16.04■□□□□ 0.16
SMARCA4-211ENST00000586921 IFT57Q9NWB7 429 aa16.04■□□□□ 0.16
SMARCA4-211ENST00000586921 TACC3Q9Y6A5 838 aa16.04■□□□□ 0.16
SMARCA4-211ENST00000586921 CHD7Q9P2D1 2997 aa16.03■□□□□ 0.16
SMARCA4-211ENST00000586921 SLURP2P0DP57 97 aa16.03■□□□□ 0.16
SMARCA4-211ENST00000586921 RAG1P15918 1043 aa16.03■□□□□ 0.16
SMARCA4-211ENST00000586921 PBX2P40425 430 aa16.03■□□□□ 0.16
SMARCA4-211ENST00000586921 RGS3P49796 1198 aa16.03■□□□□ 0.16
SMARCA4-211ENST00000586921 MAP3K10Q02779 954 aa16.03■□□□□ 0.16
SMARCA4-211ENST00000586921 PLEKHH3Q7Z736 793 aa16.03■□□□□ 0.16
SMARCA4-211ENST00000586921 LINS1Q8NG48 757 aa16.03■□□□□ 0.16
SMARCA4-211ENST00000586921 PBX4Q9BYU1 374 aa16.03■□□□□ 0.16
SMARCA4-211ENST00000586921 CWC22Q9HCG8 908 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-211ENST00000586921 PLXNA1Q9UIW2 1896 aa16.03■□□□□ 0.16
SMARCA4-211ENST00000586921 ENTPD3O75355 529 aa16.02■□□□□ 0.16
SMARCA4-211ENST00000586921 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-211ENST00000586921 GNAI1P63096 354 aa16.02■□□□□ 0.16
SMARCA4-211ENST00000586921 TLE2Q04725 743 aa16.02■□□□□ 0.16
SMARCA4-211ENST00000586921 MAP2K5Q13163 448 aa16.02■□□□□ 0.16
SMARCA4-211ENST00000586921 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.16
SMARCA4-211ENST00000586921 PORCNQ9H237 461 aa16.02■□□□□ 0.16
SMARCA4-211ENST00000586921 FLRT1Q9NZU1 646 aa16.02■□□□□ 0.16
SMARCA4-211ENST00000586921 MROH5Q6ZUA9 1318 aa16.01■□□□□ 0.15
SMARCA4-211ENST00000586921 SMIM22K7EJ46 135 aa16.01■□□□□ 0.15
SMARCA4-211ENST00000586921 CLTBP09497 229 aa16.01■□□□□ 0.15
SMARCA4-211ENST00000586921 HERVK_113P62684 666 aa16.01■□□□□ 0.15
SMARCA4-211ENST00000586921 ERVK-9P63128 1117 aa16.01■□□□□ 0.15
SMARCA4-211ENST00000586921 ERVK-24P63145 666 aa16.01■□□□□ 0.15
SMARCA4-211ENST00000586921 C1orf53Q5VUE5 145 aa16.01■□□□□ 0.15
SMARCA4-211ENST00000586921 G2E3Q7L622 706 aa16.01■□□□□ 0.15
SMARCA4-211ENST00000586921 SH3BP5LQ7L8J4 393 aa16.01■□□□□ 0.15
SMARCA4-211ENST00000586921 RUNDC1Q96C34 613 aa16.01■□□□□ 0.15
SMARCA4-211ENST00000586921 TBC1D2Q9BYX2 928 aa16.01■□□□□ 0.15
SMARCA4-211ENST00000586921 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-211ENST00000586921 ADCYAP1R1P41586 468 aa16■□□□□ 0.15
SMARCA4-211ENST00000586921 NHLH1Q02575 133 aa16■□□□□ 0.15
SMARCA4-211ENST00000586921 SKIV2LQ15477 1246 aaKnown RBP16■□□□□ 0.15
SMARCA4-211ENST00000586921 EPHA10Q5JZY3 1008 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms