RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 PASKQ96RG2 1323 aa9.76□□□□□ -0.85
SMAD4-204ENST00000586253 MYH2Q9UKX2 1941 aa9.76□□□□□ -0.85
SMAD4-204ENST00000586253 RBM5P52756 815 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMAD4-204ENST00000586253 GSTO1P78417 241 aa9.75□□□□□ -0.85
SMAD4-204ENST00000586253 NUCB1Q02818 461 aa9.75□□□□□ -0.85
SMAD4-204ENST00000586253 ANGEL2Q5VTE6 544 aaKnown RBP9.75□□□□□ -0.85
SMAD4-204ENST00000586253 PPP1R18Q6NYC8 613 aa9.75□□□□□ -0.85
SMAD4-204ENST00000586253 Q6ZNB5 142 aa9.75□□□□□ -0.85
SMAD4-204ENST00000586253 DZIP1Q86YF9 867 aaKnown RBP9.75□□□□□ -0.85
SMAD4-204ENST00000586253 APOBEC3FQ8IUX4 373 aaKnown RBP9.75□□□□□ -0.85
SMAD4-204ENST00000586253 SULF1Q8IWU6 871 aa9.75□□□□□ -0.85
SMAD4-204ENST00000586253 NSUN4Q96CB9 384 aaKnown RBP9.75□□□□□ -0.85
SMAD4-204ENST00000586253 HAUS7Q99871 368 aa9.75□□□□□ -0.85
SMAD4-204ENST00000586253 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
SMAD4-204ENST00000586253 SNRKQ9NRH2 765 aa9.75□□□□□ -0.85
SMAD4-204ENST00000586253 LRP2BPQ9P2M1 347 aa9.75□□□□□ -0.85
SMAD4-204ENST00000586253 POLR2AP24928 1970 aaKnown RBP9.75□□□□□ -0.85
SMAD4-204ENST00000586253 GAKO14976 1311 aa9.75□□□□□ -0.85
SMAD4-204ENST00000586253 SALL3Q9BXA9 1300 aa9.75□□□□□ -0.85
SMAD4-204ENST00000586253 ERC2O15083 957 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 GLRX3O76003 335 aaKnown RBP9.74□□□□□ -0.85
SMAD4-204ENST00000586253 LDHCP07864 332 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 MX1P20591 662 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 MECOMQ03112 1051 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 DIXDC1Q155Q3 683 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 FKBP1CQ5VVH2 108 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 ERICH6BQ5W0A0 696 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 APOBEC3HQ6NTF7 200 aaKnown RBP9.74□□□□□ -0.85
SMAD4-204ENST00000586253 TBC1D9Q6ZT07 1266 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 KRT26Q7Z3Y9 468 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 CHD1LQ86WJ1 897 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 BCL11AQ9H165 835 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 RAI14Q9P0K7 980 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 DAGLAQ9Y4D2 1042 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 PCDHAC2Q9Y5I4 1007 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 PPP2R3BQ9Y5P8 575 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 MROH7-TTC4A0A0A0MT08 1334 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 ASTN2O75129 1339 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-204ENST00000586253 TRPM7Q96QT4 1865 aa9.74□□□□□ -0.85
SMAD4-204ENST00000586253 MYO5AQ9Y4I1 1855 aaKnown RBP9.73□□□□□ -0.85
SMAD4-204ENST00000586253 GPR75-ASB3A0A0A6YYF3 556 aa9.73□□□□□ -0.85
SMAD4-204ENST00000586253 MAP4K4O95819 1239 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-204ENST00000586253 MAP3K12Q12852 859 aa9.73□□□□□ -0.85
SMAD4-204ENST00000586253 TNFAIP1Q13829 316 aa9.73□□□□□ -0.85
SMAD4-204ENST00000586253 PADI6Q6TGC4 694 aa9.73□□□□□ -0.85
SMAD4-204ENST00000586253 CERS3Q8IU89 383 aa9.73□□□□□ -0.85
SMAD4-204ENST00000586253 ZNF384Q8TF68 577 aa9.73□□□□□ -0.85
SMAD4-204ENST00000586253 DNAJC2Q99543 621 aaKnown RBP9.73□□□□□ -0.85
SMAD4-204ENST00000586253 GLIS2Q9BZE0 524 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-204ENST00000586253 BOLA2Q9H3K6 86 aa9.73□□□□□ -0.85
SMAD4-204ENST00000586253 PIH1D3Q9NQM4 214 aaKnown RBP9.73□□□□□ -0.85
SMAD4-204ENST00000586253 PAG1Q9NWQ8 432 aa9.73□□□□□ -0.85
SMAD4-204ENST00000586253 STAP2Q9UGK3 403 aa9.73□□□□□ -0.85
SMAD4-204ENST00000586253 AOX1Q06278 1338 aa9.73□□□□□ -0.85
SMAD4-204ENST00000586253 GOLIM4O00461 696 aa9.72□□□□□ -0.85
SMAD4-204ENST00000586253 IDH1O75874 414 aaKnown RBP9.72□□□□□ -0.85
SMAD4-204ENST00000586253 HSPA6P17066 643 aa9.72□□□□□ -0.85
SMAD4-204ENST00000586253 B4GALNT3Q6L9W6 998 aa9.72□□□□□ -0.85
SMAD4-204ENST00000586253 NAA16Q6N069 864 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-204ENST00000586253 USP48Q86UV5 1035 aa9.72□□□□□ -0.85
SMAD4-204ENST00000586253 NKX2-3Q8TAU0 364 aa9.72□□□□□ -0.85
SMAD4-204ENST00000586253 PI4K2BQ8TCG2 481 aa9.72□□□□□ -0.85
SMAD4-204ENST00000586253 OTUD7AQ8TE49 926 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-204ENST00000586253 PRKD2Q9BZL6 878 aa9.72□□□□□ -0.85
SMAD4-204ENST00000586253 LNPKQ9C0E8 428 aa9.72□□□□□ -0.85
SMAD4-204ENST00000586253 ANTXR1Q9H6X2 564 aa9.72□□□□□ -0.85
SMAD4-204ENST00000586253 TDRD3Q9H7E2 651 aaKnown RBP9.72□□□□□ -0.85
SMAD4-204ENST00000586253 TMOD2Q9NZR1 351 aa9.72□□□□□ -0.85
SMAD4-204ENST00000586253 ZNF70Q9UC06 446 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-204ENST00000586253 NDUFB9Q9Y6M9 179 aa9.72□□□□□ -0.85
SMAD4-204ENST00000586253 CLRN2A0PK11 232 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 ADM5C9JUS6 153 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 TRAF5O00463 557 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 BAG3O95817 575 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 TNNI2P48788 182 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 PDE1AP54750 535 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 SWT1Q5T5J6 900 aaKnown RBP9.71□□□□□ -0.86
SMAD4-204ENST00000586253 CDC42EP5Q6NZY7 148 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 CENPQQ7L2Z9 268 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-204ENST00000586253 FAM83AQ86UY5 434 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMAD4-204ENST00000586253 DEFB129Q9H1M3 183 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 OSBPL3Q9H4L5 887 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 VEZTQ9HBM0 779 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 MYH7P12883 1935 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 RFX7Q2KHR2 1363 aa9.71□□□□□ -0.86
SMAD4-204ENST00000586253 RPAP1Q9BWH6 1393 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-204ENST00000586253 TMEM88BA6NKF7 163 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 PDE6AP16499 860 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 BTDP43251 543 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 FKBP1BP68106 108 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 LAPTM4AQ15012 233 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 LRRFIP1Q32MZ4 808 aaKnown RBP9.7□□□□□ -0.86
SMAD4-204ENST00000586253 SLC9C2Q5TAH2 1124 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 TSHZ3Q63HK5 1081 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 ZSCAN25Q6NSZ9 544 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 TICAM2Q86XR7 235 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 PLEKHM2Q8IWE5 1019 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 MAGEB6Q8N7X4 407 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 KBTBD3Q8NAB2 608 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms