RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 SERPINB13Q9UIV8 391 aa16.21■□□□□ 0.19
VMP1-203ENST00000586245 RBM8AQ9Y5S9 174 aaKnown RBP16.21■□□□□ 0.19
VMP1-203ENST00000586245 BAZ2AQ9UIF9 1905 aaKnown RBP16.2■□□□□ 0.18
VMP1-203ENST00000586245 PPP1R12BO60237 982 aaPredicted RBP16.2■□□□□ 0.18
VMP1-203ENST00000586245 TBC1D12O60347 775 aa16.2■□□□□ 0.18
VMP1-203ENST00000586245 CELF2O95319 508 aaKnown RBP16.2■□□□□ 0.18
VMP1-203ENST00000586245 FMR1Q06787 632 aaKnown RBP eCLIP16.2■□□□□ 0.18
VMP1-203ENST00000586245 TTLL12Q14166 644 aaPredicted RBP16.2■□□□□ 0.18
VMP1-203ENST00000586245 MIGA2Q7L4E1 593 aa16.2■□□□□ 0.18
VMP1-203ENST00000586245 ZNF341Q9BYN7 854 aa16.2■□□□□ 0.18
VMP1-203ENST00000586245 SWAP70Q9UH65 585 aa16.2■□□□□ 0.18
VMP1-203ENST00000586245 TAOK2Q9UL54 1235 aa16.2■□□□□ 0.18
VMP1-203ENST00000586245 EPB41L2O43491 1005 aaKnown RBP16.19■□□□□ 0.18
VMP1-203ENST00000586245 HAND2P61296 217 aa16.19■□□□□ 0.18
VMP1-203ENST00000586245 PRKG1Q13976 671 aa16.19■□□□□ 0.18
VMP1-203ENST00000586245 ARMC9Q7Z3E5 817 aa16.19■□□□□ 0.18
VMP1-203ENST00000586245 METTL16Q86W50 562 aaKnown RBP16.19■□□□□ 0.18
VMP1-203ENST00000586245 STK11IPQ8N1F8 1099 aa16.19■□□□□ 0.18
VMP1-203ENST00000586245 ZNF287Q9HBT7 754 aa16.19■□□□□ 0.18
VMP1-203ENST00000586245 ANAPC4Q9UJX5 808 aa16.19■□□□□ 0.18
VMP1-203ENST00000586245 PASKQ96RG2 1323 aa16.19■□□□□ 0.18
VMP1-203ENST00000586245 SSC5DA1L4H1 1573 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 ROBO3Q96MS0 1386 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 MAP3K10Q02779 954 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 EVX2Q03828 476 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 CTDSPL2Q05D32 466 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 GABPAQ06546 454 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 PDE4BQ07343 736 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 RNF20Q5VTR2 975 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 C16orf86Q6ZW13 317 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 C2orf69Q8N8R5 385 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 DYNLL2Q96FJ2 89 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 MKNK2Q9HBH9 465 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 LAMB1P07942 1786 aa16.18■□□□□ 0.18
VMP1-203ENST00000586245 FAM196BA6NMK8 535 aa16.17■□□□□ 0.18
VMP1-203ENST00000586245 MCCP23508 829 aa16.17■□□□□ 0.18
VMP1-203ENST00000586245 IREB2P48200 963 aaKnown RBP16.17■□□□□ 0.18
VMP1-203ENST00000586245 CDK8P49336 464 aa16.17■□□□□ 0.18
VMP1-203ENST00000586245 FKBP1BP68106 108 aa16.17■□□□□ 0.18
VMP1-203ENST00000586245 RNF41Q9H4P4 317 aaPredicted RBP16.17■□□□□ 0.18
VMP1-203ENST00000586245 GBA2Q9HCG7 927 aaPredicted RBP16.17■□□□□ 0.18
VMP1-203ENST00000586245 ANGEL1Q9UNK9 670 aaKnown RBP16.17■□□□□ 0.18
VMP1-203ENST00000586245 SMIM22K7EJ46 135 aa16.16■□□□□ 0.18
VMP1-203ENST00000586245 USP2O75604 605 aaPredicted RBP16.16■□□□□ 0.18
VMP1-203ENST00000586245 SLURP2P0DP57 97 aa16.16■□□□□ 0.18
VMP1-203ENST00000586245 CREB3L3Q68CJ9 461 aa16.16■□□□□ 0.18
VMP1-203ENST00000586245 SLC44A5Q8NCS7 719 aa16.16■□□□□ 0.18
VMP1-203ENST00000586245 STAG1Q8WVM7 1258 aa16.16■□□□□ 0.18
VMP1-203ENST00000586245 WRNIP1Q96S55 665 aa16.16■□□□□ 0.18
VMP1-203ENST00000586245 USP26Q9BXU7 913 aa16.16■□□□□ 0.18
VMP1-203ENST00000586245 DNAJC18Q9H819 358 aa16.16■□□□□ 0.18
VMP1-203ENST00000586245 TOMM22Q9NS69 142 aa16.16■□□□□ 0.18
VMP1-203ENST00000586245 SIPA1L1O43166 1804 aa16.15■□□□□ 0.18
VMP1-203ENST00000586245 SLC27A2O14975 620 aa16.15■□□□□ 0.18
VMP1-203ENST00000586245 SEC24BO95487 1268 aa16.15■□□□□ 0.18
VMP1-203ENST00000586245 CYP21A2P08686 494 aa16.15■□□□□ 0.18
VMP1-203ENST00000586245 PCP11498 1178 aaKnown RBP16.15■□□□□ 0.18
VMP1-203ENST00000586245 ZKSCAN1P17029 563 aaPredicted RBP16.15■□□□□ 0.18
VMP1-203ENST00000586245 NECTIN1Q15223 517 aa16.15■□□□□ 0.18
VMP1-203ENST00000586245 CERKLQ49MI3 558 aaPredicted RBP16.15■□□□□ 0.18
VMP1-203ENST00000586245 AKNAD1Q5T1N1 836 aa16.15■□□□□ 0.18
VMP1-203ENST00000586245 CST9Q5W186 159 aa16.15■□□□□ 0.18
VMP1-203ENST00000586245 TATDN1Q6P1N9 297 aa16.15■□□□□ 0.18
VMP1-203ENST00000586245 MFSD6Q6ZSS7 791 aa16.15■□□□□ 0.18
VMP1-203ENST00000586245 ZNF444Q8N0Y2 327 aaPredicted RBP16.15■□□□□ 0.18
VMP1-203ENST00000586245 KLRG1Q96E93 195 aa16.15■□□□□ 0.18
VMP1-203ENST00000586245 UPF2Q9HAU5 1272 aaKnown RBP16.15■□□□□ 0.18
VMP1-203ENST00000586245 ZNF112Q9UJU3 913 aa16.15■□□□□ 0.18
VMP1-203ENST00000586245 FZD1Q9UP38 647 aa16.15■□□□□ 0.18
VMP1-203ENST00000586245 PAPPA2Q9BXP8 1791 aa16.14■□□□□ 0.17
VMP1-203ENST00000586245 SHMT1P34896 483 aa16.14■□□□□ 0.17
VMP1-203ENST00000586245 MAP3K9P80192 1104 aa16.14■□□□□ 0.17
VMP1-203ENST00000586245 TRDNQ13061 729 aa16.14■□□□□ 0.17
VMP1-203ENST00000586245 MAP3K11Q16584 847 aa16.14■□□□□ 0.17
VMP1-203ENST00000586245 MOB2Q70IA6 237 aa16.14■□□□□ 0.17
VMP1-203ENST00000586245 TBC1D10CQ8IV04 446 aa16.14■□□□□ 0.17
VMP1-203ENST00000586245 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.14■□□□□ 0.17
VMP1-203ENST00000586245 CNNM2Q9H8M5 875 aa16.14■□□□□ 0.17
VMP1-203ENST00000586245 CSADQ9Y600 493 aa16.14■□□□□ 0.17
VMP1-203ENST00000586245 TRPM7Q96QT4 1865 aa16.14■□□□□ 0.17
VMP1-203ENST00000586245 LAMA4Q16363 1823 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 TMEM88BA6NKF7 163 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 PHF20L1A8MW92 1017 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 UBE2Q2LH0YL09 131 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 ORC4O43929 436 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 CTNND1O60716 968 aaKnown RBP16.13■□□□□ 0.17
VMP1-203ENST00000586245 PRDM1O75626 825 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 INPP5BP32019 993 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 HSPA4P34932 840 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 RRP12Q5JTH9 1297 aaKnown RBP16.13■□□□□ 0.17
VMP1-203ENST00000586245 ANKRD13AQ8IZ07 590 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 CCDC17Q96LX7 622 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 BACH2Q9BYV9 841 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 NBPF3Q9H094 633 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 CABP5Q9NP86 173 aa16.13■□□□□ 0.17
VMP1-203ENST00000586245 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.13■□□□□ 0.17
VMP1-203ENST00000586245 UNCXA6NJT0 531 aa16.12■□□□□ 0.17
VMP1-203ENST00000586245 E7EWF7 191 aa16.12■□□□□ 0.17
VMP1-203ENST00000586245 MPHOSPH10O00566 681 aaKnown RBP16.12■□□□□ 0.17
VMP1-203ENST00000586245 GDF11O95390 407 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms