RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 LRRFIP1Q32MZ4 808 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 METTL16Q86W50 562 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 MAPKAPK5Q8IW41 473 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 MIGA1Q8NAN2 632 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 BRI3BPQ8WY22 251 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 RIOK1Q9BRS2 568 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 CRNKL1Q9BZJ0 848 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 BCL11AQ9H165 835 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 SIPA1L1O43166 1804 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 NAV1Q8NEY1 1877 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 ZNF532Q9HCE3 1301 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 PHIPQ8WWQ0 1821 aa12.58□□□□□ -0.4
SMARCA4-209ENST00000586122 FKTNO75072 461 aa12.58□□□□□ -0.4
SMARCA4-209ENST00000586122 TBC1D8O95759 1140 aa12.58□□□□□ -0.4
SMARCA4-209ENST00000586122 ADD2P35612 726 aa12.58□□□□□ -0.4
SMARCA4-209ENST00000586122 DYNLL1P63167 89 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-209ENST00000586122 TTC6Q86TZ1 520 aa12.58□□□□□ -0.4
SMARCA4-209ENST00000586122 TRIM34Q9BYJ4 488 aa12.58□□□□□ -0.4
SMARCA4-209ENST00000586122 EHD4Q9H223 541 aa12.58□□□□□ -0.4
SMARCA4-209ENST00000586122 RWDD1Q9H446 243 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-209ENST00000586122 DDX60LQ5H9U9 1706 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-209ENST00000586122 TCRBV5S4A2TA0A5A2 114 aa12.57□□□□□ -0.4
SMARCA4-209ENST00000586122 GLRX3O76003 335 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-209ENST00000586122 PTPRAP18433 802 aa12.57□□□□□ -0.4
SMARCA4-209ENST00000586122 PKN2Q16513 984 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-209ENST00000586122 FASTKD5Q7L8L6 764 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-209ENST00000586122 CTU1Q7Z7A3 348 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-209ENST00000586122 ANKRD23Q86SG2 305 aa12.57□□□□□ -0.4
SMARCA4-209ENST00000586122 CRACR2BQ8N4Y2 399 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-209ENST00000586122 ZNF296Q8WUU4 475 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-209ENST00000586122 PTPN18Q99952 460 aa12.57□□□□□ -0.4
SMARCA4-209ENST00000586122 ZFYVE28Q9HCC9 887 aa12.57□□□□□ -0.4
SMARCA4-209ENST00000586122 ZFYP08048 801 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-209ENST00000586122 ASNSP08243 561 aa12.56□□□□□ -0.4
SMARCA4-209ENST00000586122 CAP2P40123 477 aa12.56□□□□□ -0.4
SMARCA4-209ENST00000586122 CRHR2Q13324 411 aa12.56□□□□□ -0.4
SMARCA4-209ENST00000586122 TAF1CQ15572 869 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-209ENST00000586122 KBTBD3Q8NAB2 608 aa12.56□□□□□ -0.4
SMARCA4-209ENST00000586122 EDC3Q96F86 508 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-209ENST00000586122 ERO1AQ96HE7 468 aa12.56□□□□□ -0.4
SMARCA4-209ENST00000586122 AS3MTQ9HBK9 375 aa12.56□□□□□ -0.4
SMARCA4-209ENST00000586122 SERPINB13Q9UIV8 391 aa12.56□□□□□ -0.4
SMARCA4-209ENST00000586122 PALD1Q9ULE6 856 aa12.56□□□□□ -0.4
SMARCA4-209ENST00000586122 ZHX2Q9Y6X8 837 aa12.56□□□□□ -0.4
SMARCA4-209ENST00000586122 BTBD19C9JJ37 291 aa12.55□□□□□ -0.4
SMARCA4-209ENST00000586122 MX1P20591 662 aa12.55□□□□□ -0.4
SMARCA4-209ENST00000586122 DGKZQ13574 1117 aa12.55□□□□□ -0.4
SMARCA4-209ENST00000586122 ARHGEF6Q15052 776 aa12.55□□□□□ -0.4
SMARCA4-209ENST00000586122 ANKRD45Q5TZF3 282 aa12.55□□□□□ -0.4
SMARCA4-209ENST00000586122 SMC5Q8IY18 1101 aa12.55□□□□□ -0.4
SMARCA4-209ENST00000586122 FAM43AQ8N2R8 423 aa12.55□□□□□ -0.4
SMARCA4-209ENST00000586122 DDRGK1Q96HY6 314 aa12.55□□□□□ -0.4
SMARCA4-209ENST00000586122 ATP8A2Q9NTI2 1148 aa12.55□□□□□ -0.4
SMARCA4-209ENST00000586122 SLC45A1Q9Y2W3 748 aa12.55□□□□□ -0.4
SMARCA4-209ENST00000586122 AFG3L2Q9Y4W6 797 aa12.55□□□□□ -0.4
SMARCA4-209ENST00000586122 SUPT16HQ9Y5B9 1047 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-209ENST00000586122 MYH8P13535 1937 aa12.54□□□□□ -0.4
SMARCA4-209ENST00000586122 A0A0G2JLL6 359 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-209ENST00000586122 USP17L5A8MUK1 530 aa12.54□□□□□ -0.4
SMARCA4-209ENST00000586122 PRRT2Q7Z6L0 340 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-209ENST00000586122 TICAM2Q86XR7 235 aa12.54□□□□□ -0.4
SMARCA4-209ENST00000586122 AMOTL1Q8IY63 956 aa12.54□□□□□ -0.4
SMARCA4-209ENST00000586122 ZNF280CQ8ND82 737 aa12.54□□□□□ -0.4
SMARCA4-209ENST00000586122 ABHD8Q96I13 439 aa12.54□□□□□ -0.4
SMARCA4-209ENST00000586122 PARK7Q99497 189 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-209ENST00000586122 MCOLN1Q9GZU1 580 aa12.54□□□□□ -0.4
SMARCA4-209ENST00000586122 SAP30BPQ9UHR5 308 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-209ENST00000586122 LOC285556D6RIA3 1793 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 BAZ2AQ9UIF9 1905 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 FAM196BA6NMK8 535 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 TLR2O60603 784 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 MBD4O95243 580 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 POLR3DP05423 398 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 SP3Q02447 781 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 LCORLQ8N3X6 602 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 PROCA1Q8NCQ7 364 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 EXOC6Q8TAG9 804 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 PI4K2BQ8TCG2 481 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 APPBP2Q92624 585 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 WDR18Q9BV38 432 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 DNAJC18Q9H819 358 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 DCP1AQ9NPI6 582 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 MCM9Q9NXL9 1143 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 STAP2Q9UGK3 403 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 SALL3Q9BXA9 1300 aa12.53□□□□□ -0.4
SMARCA4-209ENST00000586122 PDHXO00330 501 aa12.52□□□□□ -0.41
SMARCA4-209ENST00000586122 RNF113AO15541 343 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-209ENST00000586122 PABPC4Q13310 644 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMARCA4-209ENST00000586122 MOGSQ13724 837 aa12.52□□□□□ -0.41
SMARCA4-209ENST00000586122 TATDN1Q6P1N9 297 aa12.52□□□□□ -0.41
SMARCA4-209ENST00000586122 R3HDMLQ9H3Y0 253 aa12.52□□□□□ -0.41
SMARCA4-209ENST00000586122 ARMT1Q9H993 441 aa12.52□□□□□ -0.41
SMARCA4-209ENST00000586122 SWAP70Q9UH65 585 aa12.52□□□□□ -0.41
SMARCA4-209ENST00000586122 PNMA3Q9UL41 463 aa12.52□□□□□ -0.41
SMARCA4-209ENST00000586122 TRIM75PA6NK02 468 aa12.51□□□□□ -0.41
SMARCA4-209ENST00000586122 C19orf81C9J6K1 198 aa12.51□□□□□ -0.41
SMARCA4-209ENST00000586122 GNRH1P01148 92 aa12.51□□□□□ -0.41
SMARCA4-209ENST00000586122 SLURP2P0DP57 97 aa12.51□□□□□ -0.41
SMARCA4-209ENST00000586122 GNAT2P19087 354 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms