RNA–Protein interactions for RNA: ENST00000585223.1

DDX5-233, Transcript of DEAD-box helicase 5, human

TSL 2

Gene DDX5, Length 699 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX5-233	ENST00000585223	WRNIP1	Q96S55	665 aa		13.41	□□□□□ -0.26
DDX5-233	ENST00000585223	HELLS	Q9NRZ9	838 aa		13.41	□□□□□ -0.26
DDX5-233	ENST00000585223	MCM9	Q9NXL9	1143 aa		13.41	□□□□□ -0.26
DDX5-233	ENST00000585223	IREB2	P48200	963 aa	Known RBP	13.4	□□□□□ -0.26
DDX5-233	ENST00000585223	RRP1B	Q14684	758 aa	Known RBP	13.4	□□□□□ -0.26
DDX5-233	ENST00000585223	DEFB115	Q30KQ5	88 aa		13.4	□□□□□ -0.26
DDX5-233	ENST00000585223	RGMB	Q6NW40	437 aa		13.4	□□□□□ -0.26
DDX5-233	ENST00000585223	CWC27	Q6UX04	472 aa	Known RBP	13.4	□□□□□ -0.26
DDX5-233	ENST00000585223	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.4	□□□□□ -0.26
DDX5-233	ENST00000585223	RASAL3	Q86YV0	1011 aa		13.4	□□□□□ -0.26
DDX5-233	ENST00000585223	KLRG1	Q96E93	195 aa		13.4	□□□□□ -0.26
DDX5-233	ENST00000585223	CAPNS2	Q96L46	248 aa		13.4	□□□□□ -0.26
DDX5-233	ENST00000585223	ELP3	Q9H9T3	547 aa		13.4	□□□□□ -0.26
DDX5-233	ENST00000585223	CCDC171	Q6TFL3	1326 aa		13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	POLR3D	P05423	398 aa	Predicted RBP	13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	HLA-DOA	P06340	250 aa		13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	CHML	P26374	656 aa		13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	VEGFB	P49765	207 aa		13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	PLCD1	P51178	756 aa		13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	VGLL4	Q14135	290 aa		13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	MCMDC2	Q4G0Z9	681 aa		13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	HOOK2	Q96ED9	719 aa		13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	DHX36	Q9H2U1	1008 aa	Known RBP	13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	ATP8A2	Q9NTI2	1148 aa		13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	SNCAIP	Q9Y6H5	919 aa		13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	MYH8	P13535	1937 aa		13.39	□□□□□ -0.27
DDX5-233	ENST00000585223	PHF20L1	A8MW92	1017 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	FAM155A	B1AL88	458 aa	Predicted RBP	13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	USP17L12	C9JPN9	530 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	USP17L21	D6R901	530 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	AOC2	O75106	756 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	APP	P05067	770 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	SLC10A3	P09131	477 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	GJA5	P36382	358 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	TDO2	P48775	406 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	ZNF157	P51786	506 aa	Predicted RBP	13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	MAP3K9	P80192	1104 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	MKRN3	Q13064	507 aa	Known RBP	13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	BMP2KL	Q5H9B9	411 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	CTR9	Q6PD62	1173 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	CCDC84	Q86UT8	332 aa	Predicted RBP	13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	ANKRD13A	Q8IZ07	590 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	DNAJC5G	Q8N7S2	189 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	SLC44A5	Q8NCS7	719 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	DYNLL2	Q96FJ2	89 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	ZIC5	Q96T25	663 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	PI4KB	Q9UBF8	816 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	ZNF112	Q9UJU3	913 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	LAMA4	Q16363	1823 aa		13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	WDR33	Q9C0J8	1336 aa	Known RBP	13.38	□□□□□ -0.27
DDX5-233	ENST00000585223	PHIP	Q8WWQ0	1821 aa		13.37	□□□□□ -0.27
DDX5-233	ENST00000585223	HIP1	O00291	1037 aa		13.37	□□□□□ -0.27
DDX5-233	ENST00000585223	TBC1D12	O60347	775 aa		13.37	□□□□□ -0.27
DDX5-233	ENST00000585223	GNAT2	P19087	354 aa		13.37	□□□□□ -0.27
DDX5-233	ENST00000585223	JAG1	P78504	1218 aa		13.37	□□□□□ -0.27
DDX5-233	ENST00000585223	MAP3K10	Q02779	954 aa		13.37	□□□□□ -0.27
DDX5-233	ENST00000585223	TTC6	Q86TZ1	520 aa		13.37	□□□□□ -0.27
DDX5-233	ENST00000585223	TICAM2	Q86XR7	235 aa		13.37	□□□□□ -0.27
DDX5-233	ENST00000585223	IFNL3	Q8IZI9	196 aa		13.37	□□□□□ -0.27
DDX5-233	ENST00000585223	STK11IP	Q8N1F8	1099 aa		13.37	□□□□□ -0.27
DDX5-233	ENST00000585223	HHIPL1	Q96JK4	782 aa		13.37	□□□□□ -0.27
DDX5-233	ENST00000585223	PATL2	C9JE40	543 aa	Known RBP	13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	GDF11	O95390	407 aa		13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	SHMT1	P34896	483 aa		13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	C1QBP	Q07021	282 aa	Known RBP	13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	NOL9	Q5SY16	702 aa	Known RBP	13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	C12orf60	Q5U649	245 aa		13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	METTL16	Q86W50	562 aa	Known RBP	13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	DDRGK1	Q96HY6	314 aa		13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	WNK4	Q96J92	1243 aa		13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	TRIM34	Q9BYJ4	488 aa		13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	NAPB	Q9H115	298 aa		13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	EHD4	Q9H223	541 aa		13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	HERC5	Q9UII4	1024 aa	Known RBP	13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	SERPINB13	Q9UIV8	391 aa		13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	CSAD	Q9Y600	493 aa		13.36	□□□□□ -0.27
DDX5-233	ENST00000585223	ROBO3	Q96MS0	1386 aa		13.35	□□□□□ -0.27
DDX5-233	ENST00000585223	MINDY4B	A8MYZ0	360 aa		13.35	□□□□□ -0.27
DDX5-233	ENST00000585223	HSPD1	P10809	573 aa	Known RBP	13.35	□□□□□ -0.27
DDX5-233	ENST00000585223	ECE1	P42892	770 aa		13.35	□□□□□ -0.27
DDX5-233	ENST00000585223	GABPA	Q06546	454 aa		13.35	□□□□□ -0.27
DDX5-233	ENST00000585223	GIMAP6	Q6P9H5	292 aa		13.35	□□□□□ -0.27
DDX5-233	ENST00000585223	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.35	□□□□□ -0.27
DDX5-233	ENST00000585223	SCYL3	Q8IZE3	742 aa		13.35	□□□□□ -0.27
DDX5-233	ENST00000585223	OPTN	Q96CV9	577 aa		13.35	□□□□□ -0.27
DDX5-233	ENST00000585223	SLC10A4	Q96EP9	437 aa		13.35	□□□□□ -0.27
DDX5-233	ENST00000585223	OTUD5	Q96G74	571 aa		13.35	□□□□□ -0.27
DDX5-233	ENST00000585223	RAD50	Q92878	1312 aa		13.35	□□□□□ -0.27
DDX5-233	ENST00000585223	SPDYE5	A6NIY4	337 aa		13.34	□□□□□ -0.27
DDX5-233	ENST00000585223	SBK1	Q52WX2	424 aa		13.34	□□□□□ -0.27
DDX5-233	ENST00000585223	SPRYD7	Q5W111	196 aa		13.34	□□□□□ -0.27
DDX5-233	ENST00000585223	NACAP1	Q9BZK3	213 aa		13.34	□□□□□ -0.27
DDX5-233	ENST00000585223	GTF3C3	Q9Y5Q9	886 aa		13.34	□□□□□ -0.27
DDX5-233	ENST00000585223	SGSM2	O43147	1006 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms