RNA–Protein interactions for RNA: ENST00000585025.1

AC004253.2-201, humanhuman

TSL 3 BASIC

Gene AC004253.2, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004253.2-201ENST00000585025 RFX7Q2KHR2 1363 aa11.1□□□□□ -0.63
AC004253.2-201ENST00000585025 COL2A1P02458 1487 aaPredicted RBP11.1□□□□□ -0.63
AC004253.2-201ENST00000585025 TCRBV5S4A2TA0A5A2 114 aa11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 M0R2C6 588 aa11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 CHGBP05060 677 aa11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 HSPA1AP0DMV8 641 aaKnown RBP11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 HSPA1BP0DMV9 641 aaKnown RBP11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 INPP5BP32019 993 aa11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 MFAP1P55081 439 aaKnown RBP11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 KIF23Q02241 960 aaPredicted RBP11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 WNK4Q96J92 1243 aa11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 RIOK1Q9BRS2 568 aaKnown RBP11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 NAPBQ9H115 298 aa11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 CABP5Q9NP86 173 aa11.09□□□□□ -0.63
AC004253.2-201ENST00000585025 ATRNL1Q5VV63 1379 aa11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 MINDY4BA8MYZ0 360 aa11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 PRKAB2O43741 272 aa11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 NPM3O75607 178 aaKnown RBP11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 GDF11O95390 407 aa11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 MAP2K2P36507 400 aa11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 MAP3K11Q16584 847 aa11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 TTC22Q5TAA0 569 aa11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 OTUD7BQ6GQQ9 843 aa11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 CWC27Q6UX04 472 aaKnown RBP11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 ATP8A2Q9NTI2 1148 aa11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 ARPP21Q9UBL0 812 aaPredicted RBP11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 SERPINB13Q9UIV8 391 aa11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 DDX60LQ5H9U9 1706 aaKnown RBP11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 THSD7BQ9C0I4 1608 aa11.08□□□□□ -0.64
AC004253.2-201ENST00000585025 MANSC4A6NHS7 340 aaPredicted RBP11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 UNCXA6NJT0 531 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 SLC3A2P08195 630 aaKnown RBP11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 ZBTB48P10074 688 aaPredicted RBP11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 NMIQ13287 307 aaPredicted RBP11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 RAB3GAP1Q15042 981 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 SPRYD7Q5W111 196 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 CASC1Q6TDU7 716 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 CCDC129Q6ZRS4 1044 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 SH3BP5LQ7L8J4 393 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 ERO1BQ86YB8 467 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 SCYL3Q8IZE3 742 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 DNAJC5GQ8N7S2 189 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 OSBP2Q969R2 916 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 SEC62Q99442 399 aaKnown RBP11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 FEZ1Q99689 392 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 AS3MTQ9HBK9 375 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 DCP1AQ9NPI6 582 aaPredicted RBP11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 TOMM22Q9NS69 142 aa11.07□□□□□ -0.64
AC004253.2-201ENST00000585025 CCL15-CCL14A0A0B4J2E2 113 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 TRIM75PA6NK02 468 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 RAD21O60216 631 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 SLURP2P0DP57 97 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 SDSP20132 328 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 GTF2A2P52657 109 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 SNAPC2Q13487 334 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 CCL15Q16663 113 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 CERKLQ49MI3 558 aaPredicted RBP11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 MCMDC2Q4G0Z9 681 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 ZMYM1Q5SVZ6 1142 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 LDLRAD1Q5T700 205 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 GADL1Q6ZQY3 521 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 FOXP4Q8IVH2 680 aaPredicted RBP11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 REM2Q8IYK8 340 aaPredicted RBP11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 RUFY2Q8WXA3 655 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 CNKSR2Q8WXI2 1034 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 MKNK2Q9HBH9 465 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 ZNF287Q9HBT7 754 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 HELLSQ9NRZ9 838 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 TSKSQ9UJT2 592 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 SNCAIPQ9Y6H5 919 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 ZHX2Q9Y6X8 837 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 SIPA1L1O43166 1804 aa11.06□□□□□ -0.64
AC004253.2-201ENST00000585025 A0A0D9SFI3 127 aa11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 SPDYE5A6NIY4 337 aa11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 USP17L12C9JPN9 530 aa11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 USP17L21D6R901 530 aa11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 CTNND1O60716 968 aaKnown RBP11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 CYP2D6P10635 497 aa11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 GSPT1P15170 499 aaKnown RBP11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 ATP2B2Q01814 1243 aa11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 ABCB5Q2M3G0 1257 aa11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 FAM227BQ96M60 508 aa11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 STRBPQ96SI9 672 aaKnown RBP11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 SWAP70Q9UH65 585 aa11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 ISY1Q9ULR0 285 aaKnown RBP11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 CCDC171Q6TFL3 1326 aa11.05□□□□□ -0.64
AC004253.2-201ENST00000585025 CYP2D7A0A087X1C5 515 aa11.04□□□□□ -0.64
AC004253.2-201ENST00000585025 FAM155AB1AL88 458 aaPredicted RBP11.04□□□□□ -0.64
AC004253.2-201ENST00000585025 PATL2C9JE40 543 aaKnown RBP11.04□□□□□ -0.64
AC004253.2-201ENST00000585025 CA12O43570 354 aa11.04□□□□□ -0.64
AC004253.2-201ENST00000585025 TBC1D12O60347 775 aa11.04□□□□□ -0.64
AC004253.2-201ENST00000585025 TRPA1O75762 1119 aa11.04□□□□□ -0.64
AC004253.2-201ENST00000585025 ASNSP08243 561 aa11.04□□□□□ -0.64
AC004253.2-201ENST00000585025 CETPP11597 493 aa11.04□□□□□ -0.64
AC004253.2-201ENST00000585025 PLCD1P51178 756 aa11.04□□□□□ -0.64
AC004253.2-201ENST00000585025 PPATQ06203 517 aa11.04□□□□□ -0.64
AC004253.2-201ENST00000585025 PPIL2Q13356 520 aa11.04□□□□□ -0.64
AC004253.2-201ENST00000585025 ZYXQ15942 572 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms