RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 OSBPP22059 807 aa25.01■■□□□ 1.59
TOP3A-219ENST00000584887 CEP85Q6P2H3 762 aa25.01■■□□□ 1.59
TOP3A-219ENST00000584887 RAET1EQ8TD07 263 aa25.01■■□□□ 1.59
TOP3A-219ENST00000584887 PIH1D3Q9NQM4 214 aaKnown RBP25.01■■□□□ 1.59
TOP3A-219ENST00000584887 SRRDQ9UH36 339 aa25.01■■□□□ 1.59
TOP3A-219ENST00000584887 COL2A1P02458 1487 aaPredicted RBP25.01■■□□□ 1.59
TOP3A-219ENST00000584887 MAPKAPK5Q8IW41 473 aa25■■□□□ 1.59
TOP3A-219ENST00000584887 SMCR8Q8TEV9 937 aaPredicted RBP25■■□□□ 1.59
TOP3A-219ENST00000584887 EXOC6BQ9Y2D4 811 aa25■■□□□ 1.59
TOP3A-219ENST00000584887 MYPNQ86TC9 1320 aa25■■□□□ 1.59
TOP3A-219ENST00000584887 PTPRFP10586 1907 aa24.99■■□□□ 1.59
TOP3A-219ENST00000584887 BCRP11274 1271 aa24.99■■□□□ 1.59
TOP3A-219ENST00000584887 FCGRTP55899 365 aa24.99■■□□□ 1.59
TOP3A-219ENST00000584887 ADGRA1Q86SQ6 560 aa24.99■■□□□ 1.59
TOP3A-219ENST00000584887 TGFBRAP1Q8WUH2 860 aa24.99■■□□□ 1.59
TOP3A-219ENST00000584887 EAF2Q96CJ1 260 aaPredicted RBP24.99■■□□□ 1.59
TOP3A-219ENST00000584887 ZNF512BQ96KM6 892 aaPredicted RBP24.98■■□□□ 1.59
TOP3A-219ENST00000584887 PHIPQ8WWQ0 1821 aa24.98■■□□□ 1.59
TOP3A-219ENST00000584887 IDH1O75874 414 aaKnown RBP24.97■■□□□ 1.59
TOP3A-219ENST00000584887 CYP7A1P22680 504 aa24.97■■□□□ 1.59
TOP3A-219ENST00000584887 SPP2Q13103 211 aa24.97■■□□□ 1.59
TOP3A-219ENST00000584887 AACSQ86V21 672 aa24.97■■□□□ 1.59
TOP3A-219ENST00000584887 TRIM34Q9BYJ4 488 aa24.97■■□□□ 1.59
TOP3A-219ENST00000584887 PI4KBQ9UBF8 816 aa24.97■■□□□ 1.59
TOP3A-219ENST00000584887 BIN2Q9UBW5 565 aaPredicted RBP24.97■■□□□ 1.59
TOP3A-219ENST00000584887 HERC5Q9UII4 1024 aaKnown RBP24.97■■□□□ 1.59
TOP3A-219ENST00000584887 AGTPBP1Q9UPW5 1226 aa24.97■■□□□ 1.59
TOP3A-219ENST00000584887 SLC45A1Q9Y2W3 748 aa24.97■■□□□ 1.59
TOP3A-219ENST00000584887 MYO5AQ9Y4I1 1855 aaKnown RBP24.96■■□□□ 1.59
TOP3A-219ENST00000584887 FLT1P17948 1338 aa24.96■■□□□ 1.59
TOP3A-219ENST00000584887 CAP2P40123 477 aa24.96■■□□□ 1.59
TOP3A-219ENST00000584887 PRKCZQ05513 592 aa24.96■■□□□ 1.59
TOP3A-219ENST00000584887 RRP1BQ14684 758 aaKnown RBP24.96■■□□□ 1.59
TOP3A-219ENST00000584887 TREML2Q5T2D2 321 aa24.96■■□□□ 1.59
TOP3A-219ENST00000584887 ERC1Q8IUD2 1116 aa24.96■■□□□ 1.59
TOP3A-219ENST00000584887 CRACR2BQ8N4Y2 399 aaPredicted RBP24.96■■□□□ 1.59
TOP3A-219ENST00000584887 ZNF280CQ8ND82 737 aa24.96■■□□□ 1.59
TOP3A-219ENST00000584887 DHX36Q9H2U1 1008 aaKnown RBP24.96■■□□□ 1.59
TOP3A-219ENST00000584887 SAP30BPQ9UHR5 308 aaKnown RBP24.96■■□□□ 1.59
TOP3A-219ENST00000584887 NDUFB9Q9Y6M9 179 aa24.96■■□□□ 1.59
TOP3A-219ENST00000584887 GRK4P32298 578 aa24.95■■□□□ 1.58
TOP3A-219ENST00000584887 HMGCS2P54868 508 aa24.95■■□□□ 1.58
TOP3A-219ENST00000584887 PPP4CP60510 307 aa24.95■■□□□ 1.58
TOP3A-219ENST00000584887 BCL11AQ9H165 835 aa24.95■■□□□ 1.58
TOP3A-219ENST00000584887 ATAD5Q96QE3 1844 aa24.94■■□□□ 1.58
TOP3A-219ENST00000584887 USP17L5A8MUK1 530 aa24.94■■□□□ 1.58
TOP3A-219ENST00000584887 APBB1O00213 710 aa24.94■■□□□ 1.58
TOP3A-219ENST00000584887 MS4A1P11836 297 aa24.94■■□□□ 1.58
TOP3A-219ENST00000584887 DYNLL1P63167 89 aaKnown RBP24.94■■□□□ 1.58
TOP3A-219ENST00000584887 MTFR1Q15390 333 aa24.94■■□□□ 1.58
TOP3A-219ENST00000584887 PNMA3Q9UL41 463 aa24.94■■□□□ 1.58
TOP3A-219ENST00000584887 PALD1Q9ULE6 856 aa24.94■■□□□ 1.58
TOP3A-219ENST00000584887 ANKRD13CQ8N6S4 541 aa24.93■■□□□ 1.58
TOP3A-219ENST00000584887 MIGA1Q8NAN2 632 aa24.93■■□□□ 1.58
TOP3A-219ENST00000584887 PROCA1Q8NCQ7 364 aaPredicted RBP24.93■■□□□ 1.58
TOP3A-219ENST00000584887 IL1RAPL2Q9NP60 686 aa24.93■■□□□ 1.58
TOP3A-219ENST00000584887 MAGEB6Q8N7X4 407 aa24.92■■□□□ 1.58
TOP3A-219ENST00000584887 TBC1D2Q9BYX2 928 aa24.92■■□□□ 1.58
TOP3A-219ENST00000584887 AS3MTQ9HBK9 375 aa24.92■■□□□ 1.58
TOP3A-219ENST00000584887 GABRQQ9UN88 632 aa24.92■■□□□ 1.58
TOP3A-219ENST00000584887 MGAMO43451 1857 aa24.92■■□□□ 1.58
TOP3A-219ENST00000584887 TNPO2O14787 897 aaKnown RBP24.91■■□□□ 1.58
TOP3A-219ENST00000584887 HLA-DOAP06340 250 aa24.91■■□□□ 1.58
TOP3A-219ENST00000584887 HSP90AB4PQ58FF6 505 aa24.91■■□□□ 1.58
TOP3A-219ENST00000584887 TAOK2Q9UL54 1235 aa24.91■■□□□ 1.58
TOP3A-219ENST00000584887 CDK5RAP2Q96SN8 1893 aa24.91■■□□□ 1.58
TOP3A-219ENST00000584887 SIPA1L1O43166 1804 aa24.91■■□□□ 1.58
TOP3A-219ENST00000584887 CENPFP49454 3210 aa24.9■■□□□ 1.58
TOP3A-219ENST00000584887 GDF11O95390 407 aa24.9■■□□□ 1.58
TOP3A-219ENST00000584887 USP5P45974 858 aa24.9■■□□□ 1.58
TOP3A-219ENST00000584887 ANTXR1Q9H6X2 564 aa24.9■■□□□ 1.58
TOP3A-219ENST00000584887 DNAJC18Q9H819 358 aa24.9■■□□□ 1.58
TOP3A-219ENST00000584887 COG6Q9Y2V7 657 aa24.9■■□□□ 1.58
TOP3A-219ENST00000584887 IGSF3O75054 1194 aa24.89■■□□□ 1.58
TOP3A-219ENST00000584887 ASNSP08243 561 aa24.89■■□□□ 1.58
TOP3A-219ENST00000584887 UBXN2AP68543 259 aa24.89■■□□□ 1.58
TOP3A-219ENST00000584887 MAP3K12Q12852 859 aa24.89■■□□□ 1.58
TOP3A-219ENST00000584887 PABPC4Q13310 644 aaKnown RBP eCLIP24.89■■□□□ 1.58
TOP3A-219ENST00000584887 MTMR2Q13614 643 aa24.89■■□□□ 1.58
TOP3A-219ENST00000584887 FOXP4Q8IVH2 680 aaPredicted RBP24.89■■□□□ 1.58
TOP3A-219ENST00000584887 RHPN1Q8TCX5 695 aa24.89■■□□□ 1.58
TOP3A-219ENST00000584887 CCL5P13501 91 aa24.88■■□□□ 1.57
TOP3A-219ENST00000584887 FLT3LGP49771 235 aa24.88■■□□□ 1.57
TOP3A-219ENST00000584887 SHROOM1Q2M3G4 852 aaPredicted RBP24.88■■□□□ 1.57
TOP3A-219ENST00000584887 SLAIN1Q8ND83 568 aa24.88■■□□□ 1.57
TOP3A-219ENST00000584887 RNF208Q9H0X6 261 aa24.88■■□□□ 1.57
TOP3A-219ENST00000584887 TMOD4Q9NZQ9 345 aa24.88■■□□□ 1.57
TOP3A-219ENST00000584887 FOCADQ5VW36 1801 aa24.88■■□□□ 1.57
TOP3A-219ENST00000584887 LOC285556D6RIA3 1793 aa24.88■■□□□ 1.57
TOP3A-219ENST00000584887 ADCY3O60266 1144 aa24.87■■□□□ 1.57
TOP3A-219ENST00000584887 HMMRO75330 724 aa24.87■■□□□ 1.57
TOP3A-219ENST00000584887 ELNP15502 786 aa24.87■■□□□ 1.57
TOP3A-219ENST00000584887 JAG1P78504 1218 aa24.87■■□□□ 1.57
TOP3A-219ENST00000584887 COA7Q96BR5 231 aa24.87■■□□□ 1.57
TOP3A-219ENST00000584887 ASCC2Q9H1I8 757 aaPredicted RBP24.87■■□□□ 1.57
TOP3A-219ENST00000584887 DDX19BQ9UMR2 479 aa24.87■■□□□ 1.57
TOP3A-219ENST00000584887 IRX3P78415 501 aaPredicted RBP24.86■■□□□ 1.57
TOP3A-219ENST00000584887 FAM110CQ1W6H9 321 aa24.86■■□□□ 1.57
TOP3A-219ENST00000584887 WDR18Q9BV38 432 aa24.86■■□□□ 1.57
TOP3A-219ENST00000584887 ZBTB21Q9ULJ3 1066 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms