RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CYP27A1Q02318 531 aa6.3□□□□□ -1.4
VAPA-206ENST00000583475 LMNB2Q03252 620 aa6.3□□□□□ -1.4
VAPA-206ENST00000583475 TSNAXIP1Q2TAA8 658 aa6.3□□□□□ -1.4
VAPA-206ENST00000583475 ERMP1Q7Z2K6 904 aa6.3□□□□□ -1.4
VAPA-206ENST00000583475 CCDC84Q86UT8 332 aaPredicted RBP6.3□□□□□ -1.4
VAPA-206ENST00000583475 RHOVQ96L33 236 aa6.3□□□□□ -1.4
VAPA-206ENST00000583475 WNT10AQ9GZT5 417 aa6.3□□□□□ -1.4
VAPA-206ENST00000583475 COPRSQ9NQ92 184 aa6.3□□□□□ -1.4
VAPA-206ENST00000583475 PICK1Q9NRD5 415 aa6.3□□□□□ -1.4
VAPA-206ENST00000583475 PRAMEF27A3QJZ7 478 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 FAM221AA4D161 298 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 MINDY4BA8MYZ0 360 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 CYP26A1O43174 497 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 LEFTY1O75610 366 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 FAM87AP0C7U9 286 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 GRIK1P39086 918 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 BNC2Q6ZN30 1099 aaPredicted RBP6.29□□□□□ -1.4
VAPA-206ENST00000583475 DTX1Q86Y01 620 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 RGS22Q8NE09 1264 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 ZNF507Q8TCN5 953 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 DUSP23Q9BVJ7 150 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 BACH2Q9BYV9 841 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 FBRSQ9HAH7 460 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 PCMTD2Q9NV79 361 aa6.29□□□□□ -1.4
VAPA-206ENST00000583475 ADAMTS4O75173 837 aa6.28□□□□□ -1.4
VAPA-206ENST00000583475 F13A1P00488 732 aa6.28□□□□□ -1.4
VAPA-206ENST00000583475 SPINK2P20155 84 aa6.28□□□□□ -1.4
VAPA-206ENST00000583475 GARTP22102 1010 aa6.28□□□□□ -1.4
VAPA-206ENST00000583475 RPL6Q02878 288 aaKnown RBP6.28□□□□□ -1.4
VAPA-206ENST00000583475 PWP1Q13610 501 aa6.28□□□□□ -1.4
VAPA-206ENST00000583475 MSMPQ1L6U9 139 aa6.28□□□□□ -1.4
VAPA-206ENST00000583475 CYP27C1Q4G0S4 372 aa6.28□□□□□ -1.4
VAPA-206ENST00000583475 CDC37L1Q7L3B6 337 aa6.28□□□□□ -1.4
VAPA-206ENST00000583475 FAM214BQ7L5A3 538 aa6.28□□□□□ -1.4
VAPA-206ENST00000583475 KCT2Q8NC54 265 aa6.28□□□□□ -1.4
VAPA-206ENST00000583475 KBTBD4Q9NVX7 518 aa6.28□□□□□ -1.4
VAPA-206ENST00000583475 TACC3Q9Y6A5 838 aa6.28□□□□□ -1.4
VAPA-206ENST00000583475 CILPO75339 1184 aa6.27□□□□□ -1.41
VAPA-206ENST00000583475 GRK4P32298 578 aa6.27□□□□□ -1.41
VAPA-206ENST00000583475 SLBPQ14493 270 aaKnown RBP eCLIP6.27□□□□□ -1.41
VAPA-206ENST00000583475 NKG7Q16617 165 aa6.27□□□□□ -1.41
VAPA-206ENST00000583475 TMEM87AQ8NBN3 555 aa6.27□□□□□ -1.41
VAPA-206ENST00000583475 GATAD2BQ8WXI9 593 aa6.27□□□□□ -1.41
VAPA-206ENST00000583475 BCL11AQ9H165 835 aa6.27□□□□□ -1.41
VAPA-206ENST00000583475 CAP2P40123 477 aa6.26□□□□□ -1.41
VAPA-206ENST00000583475 ETF1P62495 437 aaKnown RBP6.26□□□□□ -1.41
VAPA-206ENST00000583475 FAM160A1Q05DH4 1040 aa6.26□□□□□ -1.41
VAPA-206ENST00000583475 FBXL19Q6PCT2 694 aa6.26□□□□□ -1.41
VAPA-206ENST00000583475 HID1Q8IV36 788 aa6.26□□□□□ -1.41
VAPA-206ENST00000583475 TOP6BLQ8N6T0 577 aa6.26□□□□□ -1.41
VAPA-206ENST00000583475 LRRC4CQ9HCJ2 640 aa6.26□□□□□ -1.41
VAPA-206ENST00000583475 PRDM10Q9NQV6 1147 aa6.26□□□□□ -1.41
VAPA-206ENST00000583475 ZC3H7BQ9UGR2 993 aaKnown RBP6.26□□□□□ -1.41
VAPA-206ENST00000583475 GGT7Q9UJ14 662 aa6.26□□□□□ -1.41
VAPA-206ENST00000583475 GREM1O60565 184 aa6.25□□□□□ -1.41
VAPA-206ENST00000583475 LRIG2O94898 1065 aa6.25□□□□□ -1.41
VAPA-206ENST00000583475 ARMCX6Q7L4S7 300 aa6.25□□□□□ -1.41
VAPA-206ENST00000583475 HS2ST1Q7LGA3 356 aa6.25□□□□□ -1.41
VAPA-206ENST00000583475 GOLM1Q8NBJ4 401 aa6.25□□□□□ -1.41
VAPA-206ENST00000583475 HEXIM2Q96MH2 286 aaKnown RBP6.25□□□□□ -1.41
VAPA-206ENST00000583475 FOXQ1Q9C009 403 aa6.25□□□□□ -1.41
VAPA-206ENST00000583475 KCNQ5Q9NR82 932 aa6.25□□□□□ -1.41
VAPA-206ENST00000583475 U3KQE9 123 aa6.25□□□□□ -1.41
VAPA-206ENST00000583475 EOMESO95936 686 aa6.24□□□□□ -1.41
VAPA-206ENST00000583475 VAMP1P23763 118 aa6.24□□□□□ -1.41
VAPA-206ENST00000583475 EIF4A3P38919 411 aaKnown RBP6.24□□□□□ -1.41
VAPA-206ENST00000583475 TJP2Q9UDY2 1190 aa6.24□□□□□ -1.41
VAPA-206ENST00000583475 CORINQ9Y5Q5 1042 aa6.24□□□□□ -1.41
VAPA-206ENST00000583475 SLITRK5O94991 958 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 CST3P01034 146 aaPredicted RBP6.23□□□□□ -1.41
VAPA-206ENST00000583475 PRNPP04156 253 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 PGRP06401 933 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 OXCT1P55809 520 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 SNAP47Q5SQN1 464 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 FAM196AQ6ZSG2 479 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 NBPF11Q86T75 865 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 MRPL41Q8IXM3 137 aaKnown RBP6.23□□□□□ -1.41
VAPA-206ENST00000583475 FAM181AQ8N9Y4 354 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 FBXO27Q8NI29 283 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 RIN3Q8TB24 985 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 ZNF296Q8WUU4 475 aaPredicted RBP6.23□□□□□ -1.41
VAPA-206ENST00000583475 ACSF2Q96CM8 615 aaPredicted RBP6.23□□□□□ -1.41
VAPA-206ENST00000583475 ADAMTS1Q9UHI8 967 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 CNTNAP4Q9C0A0 1308 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 PRR36Q9H6K5 1346 aa6.23□□□□□ -1.41
VAPA-206ENST00000583475 ROBO2Q9HCK4 1378 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 UNCXA6NJT0 531 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 IGF2BP3O00425 579 aaKnown RBP eCLIP6.22□□□□□ -1.41
VAPA-206ENST00000583475 BPNT1O95861 308 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 WNT11O96014 354 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 ZNF76P36508 570 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 FANCCQ00597 558 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 PDE4BQ07343 736 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 PRAMEF13Q5VWM6 474 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 DIEXFQ68CQ4 756 aaKnown RBP6.22□□□□□ -1.41
VAPA-206ENST00000583475 SLC6A19Q695T7 634 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 NFXL1Q6ZNB6 911 aa6.22□□□□□ -1.41
VAPA-206ENST00000583475 MCATQ8IVS2 390 aaKnown RBP6.22□□□□□ -1.41
VAPA-206ENST00000583475 PLD6Q8N2A8 252 aaKnown RBP6.22□□□□□ -1.41
VAPA-206ENST00000583475 MFSD2AQ8NA29 543 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms