RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 ZKSCAN1P17029 563 aaPredicted RBP16.22■□□□□ 0.19
ITGB4-209ENST00000583327 NT5C2P49902 561 aa16.22■□□□□ 0.19
ITGB4-209ENST00000583327 CTDSPL2Q05D32 466 aa16.22■□□□□ 0.19
ITGB4-209ENST00000583327 KRT32Q14532 448 aa16.22■□□□□ 0.19
ITGB4-209ENST00000583327 ADCK5Q3MIX3 580 aa16.22■□□□□ 0.19
ITGB4-209ENST00000583327 CDAN1Q8IWY9 1227 aa16.22■□□□□ 0.19
ITGB4-209ENST00000583327 INCENPQ9NQS7 918 aa16.22■□□□□ 0.19
ITGB4-209ENST00000583327 SERPINB13Q9UIV8 391 aa16.22■□□□□ 0.19
ITGB4-209ENST00000583327 ORC4O43929 436 aa16.21■□□□□ 0.19
ITGB4-209ENST00000583327 COL9A3Q14050 684 aaPredicted RBP16.21■□□□□ 0.19
ITGB4-209ENST00000583327 TATDN1Q6P1N9 297 aa16.21■□□□□ 0.19
ITGB4-209ENST00000583327 AMOTL1Q8IY63 956 aa16.21■□□□□ 0.19
ITGB4-209ENST00000583327 NKX2-3Q8TAU0 364 aa16.21■□□□□ 0.19
ITGB4-209ENST00000583327 DCPSQ96C86 337 aaKnown RBP16.21■□□□□ 0.19
ITGB4-209ENST00000583327 DYNLL2Q96FJ2 89 aa16.21■□□□□ 0.19
ITGB4-209ENST00000583327 DNAJC18Q9H819 358 aa16.21■□□□□ 0.19
ITGB4-209ENST00000583327 ZSWIM6Q9HCJ5 1215 aa16.21■□□□□ 0.19
ITGB4-209ENST00000583327 SCAF8Q9UPN6 1271 aaKnown RBP16.21■□□□□ 0.19
ITGB4-209ENST00000583327 SIPA1L1O43166 1804 aa16.21■□□□□ 0.19
ITGB4-209ENST00000583327 MYH1P12882 1939 aa16.21■□□□□ 0.19
ITGB4-209ENST00000583327 HLA-DOAP06340 250 aa16.2■□□□□ 0.18
ITGB4-209ENST00000583327 POTEIP0CG38 1075 aa16.2■□□□□ 0.18
ITGB4-209ENST00000583327 POTEJP0CG39 1038 aa16.2■□□□□ 0.18
ITGB4-209ENST00000583327 CDK8P49336 464 aa16.2■□□□□ 0.18
ITGB4-209ENST00000583327 EXOSC10Q01780 885 aaKnown RBP16.2■□□□□ 0.18
ITGB4-209ENST00000583327 MFSD6Q6ZSS7 791 aa16.2■□□□□ 0.18
ITGB4-209ENST00000583327 IL27Q8NEV9 243 aa16.2■□□□□ 0.18
ITGB4-209ENST00000583327 CSRNP1Q96S65 589 aa16.2■□□□□ 0.18
ITGB4-209ENST00000583327 RNF41Q9H4P4 317 aaPredicted RBP16.2■□□□□ 0.18
ITGB4-209ENST00000583327 SWAP70Q9UH65 585 aa16.2■□□□□ 0.18
ITGB4-209ENST00000583327 HERC5Q9UII4 1024 aaKnown RBP16.2■□□□□ 0.18
ITGB4-209ENST00000583327 LAMB1P07942 1786 aa16.19■□□□□ 0.18
ITGB4-209ENST00000583327 SLC3A2P08195 630 aaKnown RBP16.19■□□□□ 0.18
ITGB4-209ENST00000583327 SLURP2P0DP57 97 aa16.19■□□□□ 0.18
ITGB4-209ENST00000583327 SHMT1P34896 483 aa16.19■□□□□ 0.18
ITGB4-209ENST00000583327 NBPF12Q5TAG4 269 aaPredicted RBP16.19■□□□□ 0.18
ITGB4-209ENST00000583327 CDC37L1Q7L3B6 337 aa16.19■□□□□ 0.18
ITGB4-209ENST00000583327 LDHDQ86WU2 507 aa16.19■□□□□ 0.18
ITGB4-209ENST00000583327 MB21D2Q8IYB1 491 aaPredicted RBP16.19■□□□□ 0.18
ITGB4-209ENST00000583327 NEK1Q96PY6 1258 aa16.19■□□□□ 0.18
ITGB4-209ENST00000583327 CNNM2Q9H8M5 875 aa16.19■□□□□ 0.18
ITGB4-209ENST00000583327 NEDD4P46934 1319 aa16.19■□□□□ 0.18
ITGB4-209ENST00000583327 RASA1P20936 1047 aa16.18■□□□□ 0.18
ITGB4-209ENST00000583327 PDE4BQ07343 736 aa16.18■□□□□ 0.18
ITGB4-209ENST00000583327 SLC4A8Q2Y0W8 1093 aa16.18■□□□□ 0.18
ITGB4-209ENST00000583327 EAPPQ56P03 285 aaPredicted RBP16.18■□□□□ 0.18
ITGB4-209ENST00000583327 SULF1Q8IWU6 871 aa16.18■□□□□ 0.18
ITGB4-209ENST00000583327 ZSCAN29Q8IWY8 852 aaPredicted RBP16.18■□□□□ 0.18
ITGB4-209ENST00000583327 FBXL16Q8N461 479 aa16.18■□□□□ 0.18
ITGB4-209ENST00000583327 SLC44A5Q8NCS7 719 aa16.18■□□□□ 0.18
ITGB4-209ENST00000583327 NCOA7Q8NI08 942 aa16.18■□□□□ 0.18
ITGB4-209ENST00000583327 KRT23Q9C075 422 aa16.18■□□□□ 0.18
ITGB4-209ENST00000583327 ALDH8A1Q9H2A2 487 aaPredicted RBP16.18■□□□□ 0.18
ITGB4-209ENST00000583327 ZSWIM5Q9P217 1185 aa16.18■□□□□ 0.18
ITGB4-209ENST00000583327 PHF20L1A8MW92 1017 aa16.17■□□□□ 0.18
ITGB4-209ENST00000583327 HMGB1P09429 215 aaKnown RBP16.17■□□□□ 0.18
ITGB4-209ENST00000583327 PSMA5P28066 241 aa16.17■□□□□ 0.18
ITGB4-209ENST00000583327 NOVP48745 357 aa16.17■□□□□ 0.18
ITGB4-209ENST00000583327 RUFY3Q7L099 469 aa16.17■□□□□ 0.18
ITGB4-209ENST00000583327 KRT26Q7Z3Y9 468 aa16.17■□□□□ 0.18
ITGB4-209ENST00000583327 USP48Q86UV5 1035 aa16.17■□□□□ 0.18
ITGB4-209ENST00000583327 JAKMIP1Q96N16 626 aaKnown RBP16.17■□□□□ 0.18
ITGB4-209ENST00000583327 MTA3Q9BTC8 594 aa16.17■□□□□ 0.18
ITGB4-209ENST00000583327 ZNF287Q9HBT7 754 aa16.17■□□□□ 0.18
ITGB4-209ENST00000583327 ZNF112Q9UJU3 913 aa16.17■□□□□ 0.18
ITGB4-209ENST00000583327 WDR19Q8NEZ3 1342 aa16.17■□□□□ 0.18
ITGB4-209ENST00000583327 B4E1Z4 1266 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 ADM5C9JUS6 153 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 KIF3CO14782 793 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 ANTXR2P58335 489 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 RRP1BQ14684 758 aaKnown RBP16.16■□□□□ 0.18
ITGB4-209ENST00000583327 SUPT20HL1Q3ZLR7 823 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 PRAMEF18Q5VWM3 479 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 DLK2Q6UY11 383 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 CYB5R4Q7L1T6 521 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 DHX32Q7L7V1 743 aaKnown RBP16.16■□□□□ 0.18
ITGB4-209ENST00000583327 ZNF526Q8TF50 670 aaPredicted RBP16.16■□□□□ 0.18
ITGB4-209ENST00000583327 HOOK2Q96ED9 719 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 CCDC17Q96LX7 622 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 TTC14Q96N46 770 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.16■□□□□ 0.18
ITGB4-209ENST00000583327 AGXT2Q9BYV1 514 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 TSHZ2Q9NRE2 1034 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 TCP11L1Q9NUJ3 509 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 SSC5DA1L4H1 1573 aa16.16■□□□□ 0.18
ITGB4-209ENST00000583327 PRDM1O75626 825 aa16.15■□□□□ 0.18
ITGB4-209ENST00000583327 ITGBL1O95965 494 aaPredicted RBP16.15■□□□□ 0.18
ITGB4-209ENST00000583327 RPS6KB1P23443 525 aa16.15■□□□□ 0.18
ITGB4-209ENST00000583327 TRDNQ13061 729 aa16.15■□□□□ 0.18
ITGB4-209ENST00000583327 RABEP1Q15276 862 aa16.15■□□□□ 0.18
ITGB4-209ENST00000583327 NEDD1Q8NHV4 660 aa16.15■□□□□ 0.18
ITGB4-209ENST00000583327 ESR2Q92731 530 aa16.15■□□□□ 0.18
ITGB4-209ENST00000583327 GLIS2Q9BZE0 524 aaPredicted RBP16.15■□□□□ 0.18
ITGB4-209ENST00000583327 MKNK2Q9HBH9 465 aa16.15■□□□□ 0.18
ITGB4-209ENST00000583327 POLR2AP24928 1970 aaKnown RBP16.15■□□□□ 0.18
ITGB4-209ENST00000583327 IGKV6D-41A0A0C4DH26 115 aa16.14■□□□□ 0.17
ITGB4-209ENST00000583327 FAM196BA6NMK8 535 aa16.14■□□□□ 0.17
ITGB4-209ENST00000583327 CASTP20810 708 aaKnown RBP16.14■□□□□ 0.17
ITGB4-209ENST00000583327 MAP1SQ66K74 1059 aaPredicted RBP16.14■□□□□ 0.17
ITGB4-209ENST00000583327 BLOC1S2Q6QNY1 142 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms