RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 ALDH3A1P30838 453 aa18.31■□□□□ 0.52
ERBB2-214ENST00000583038 ADCY7P51828 1080 aa18.31■□□□□ 0.52
ERBB2-214ENST00000583038 SPATA24Q86W54 205 aa18.31■□□□□ 0.52
ERBB2-214ENST00000583038 AKNAD1Q5T1N1 836 aa18.31■□□□□ 0.52
ERBB2-214ENST00000583038 DNAJC10Q8IXB1 793 aa18.31■□□□□ 0.52
ERBB2-214ENST00000583038 ZNF594Q96JF6 807 aaPredicted RBP18.31■□□□□ 0.52
ERBB2-214ENST00000583038 ORAI2Q96SN7 254 aa18.31■□□□□ 0.52
ERBB2-214ENST00000583038 CBX8Q9HC52 389 aa18.31■□□□□ 0.52
ERBB2-214ENST00000583038 NEURL1BA8MQ27 555 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 MXRA7P84157 204 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 CLUL1Q15846 466 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 MCTP2Q6DN12 878 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 IFT74Q96LB3 600 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 NFE2L3Q9Y4A8 694 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 BIRC3Q13489 604 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 OTUD6BQ8N6M0 293 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 ZNF532Q9HCE3 1301 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 ARHGEF35A5YM69 484 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 CCNT1O60563 726 aaKnown RBP18.3■□□□□ 0.52
ERBB2-214ENST00000583038 TICAM2Q86XR7 235 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 FAM212AQ96EL1 285 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 SELENOSQ9BQE4 189 aa18.3■□□□□ 0.52
ERBB2-214ENST00000583038 SAP30BPQ9UHR5 308 aaKnown RBP18.3■□□□□ 0.52
ERBB2-214ENST00000583038 DISP1Q96F81 1524 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 PDE6BP35913 854 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 TXKP42681 527 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 POSTNQ15063 836 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 RBM26Q5T8P6 1007 aaKnown RBP18.29■□□□□ 0.52
ERBB2-214ENST00000583038 MSL1Q68DK7 614 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 SUPT20HQ8NEM7 779 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 SLC1A4P43007 532 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 INF2Q27J81 1249 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 NOX5Q96PH1 765 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 VPS18Q9P253 973 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 ARPP21Q9UBL0 812 aaPredicted RBP18.29■□□□□ 0.52
ERBB2-214ENST00000583038 SPOPO43791 374 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 ZAP70P43403 619 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 SNX29Q8TEQ0 813 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 SAMD15Q9P1V8 674 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 ZBTB21Q9ULJ3 1066 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 JAG2Q9Y219 1238 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 TMEM2Q9UHN6 1383 aa18.29■□□□□ 0.52
ERBB2-214ENST00000583038 TLDC2A0PJX2 215 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 E7EWF7 191 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 ATP2C2O75185 946 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 GIGYF1O75420 1035 aaPredicted RBP18.28■□□□□ 0.52
ERBB2-214ENST00000583038 PRDM1O75626 825 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 TERF1P54274 439 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 GTF3C6Q969F1 213 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 TSKSQ9UJT2 592 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 SNX16P57768 344 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 FCHSD1Q86WN1 690 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 USP44Q9H0E7 712 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 C8orf74Q6P047 294 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 FAM173BQ6P4H8 233 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 ZNF354CQ86Y25 554 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 LMBRD1Q9NUN5 540 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 DNM3Q9UQ16 869 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.28■□□□□ 0.52
ERBB2-214ENST00000583038 KRT9P35527 623 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 SLC8A3P57103 927 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 ASIC2Q16515 512 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 LIN9Q5TKA1 542 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 ADALQ6DHV7 355 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 CCDC51Q96ER9 411 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 NT5C3AQ9H0P0 336 aa18.28■□□□□ 0.52
ERBB2-214ENST00000583038 SETDB1Q15047 1291 aa18.27■□□□□ 0.52
ERBB2-214ENST00000583038 KDRP35968 1356 aa18.27■□□□□ 0.52
ERBB2-214ENST00000583038 ARID4AP29374 1257 aaPredicted RBP18.27■□□□□ 0.52
ERBB2-214ENST00000583038 HERC4Q5GLZ8 1057 aaPredicted RBP18.27■□□□□ 0.52
ERBB2-214ENST00000583038 MYSM1Q5VVJ2 828 aa18.27■□□□□ 0.52
ERBB2-214ENST00000583038 CCDC63Q8NA47 563 aa18.27■□□□□ 0.52
ERBB2-214ENST00000583038 PICK1Q9NRD5 415 aa18.27■□□□□ 0.52
ERBB2-214ENST00000583038 NKIRAS1Q9NYS0 192 aa18.27■□□□□ 0.52
ERBB2-214ENST00000583038 FAM169AQ9Y6X4 670 aa18.27■□□□□ 0.52
ERBB2-214ENST00000583038 UBL4BQ8N7F7 174 aa18.27■□□□□ 0.52
ERBB2-214ENST00000583038 AATFQ9NY61 560 aaKnown RBP eCLIP18.27■□□□□ 0.52
ERBB2-214ENST00000583038 CLEC11AQ9Y240 323 aa18.27■□□□□ 0.52
ERBB2-214ENST00000583038 ERCC5P28715 1186 aaPredicted RBP18.27■□□□□ 0.51
ERBB2-214ENST00000583038 LMTK3Q96Q04 1460 aa18.27■□□□□ 0.51
ERBB2-214ENST00000583038 REXO1Q8N1G1 1221 aaKnown RBP18.26■□□□□ 0.51
ERBB2-214ENST00000583038 SECISBP2LQ93073 1101 aaKnown RBP18.26■□□□□ 0.51
ERBB2-214ENST00000583038 TMOD4Q9NZQ9 345 aa18.26■□□□□ 0.51
ERBB2-214ENST00000583038 DPP8Q6V1X1 898 aaPredicted RBP18.26■□□□□ 0.51
ERBB2-214ENST00000583038 RAB3IL1Q8TBN0 382 aa18.26■□□□□ 0.51
ERBB2-214ENST00000583038 VTI1AQ96AJ9 217 aa18.26■□□□□ 0.51
ERBB2-214ENST00000583038 MAGEA1P43355 309 aa18.26■□□□□ 0.51
ERBB2-214ENST00000583038 MAP3K9P80192 1104 aa18.26■□□□□ 0.51
ERBB2-214ENST00000583038 MAK16Q9BXY0 300 aaKnown RBP18.26■□□□□ 0.51
ERBB2-214ENST00000583038 FLOT1O75955 427 aa18.26■□□□□ 0.51
ERBB2-214ENST00000583038 BRDTQ58F21 947 aaPredicted RBP18.26■□□□□ 0.51
ERBB2-214ENST00000583038 CDC37L1Q7L3B6 337 aa18.26■□□□□ 0.51
ERBB2-214ENST00000583038 ZHX1Q9UKY1 873 aaPredicted RBP18.26■□□□□ 0.51
ERBB2-214ENST00000583038 HSPA2P54652 639 aa18.25■□□□□ 0.51
ERBB2-214ENST00000583038 CCDC25Q86WR0 208 aa18.25■□□□□ 0.51
ERBB2-214ENST00000583038 STK32BQ9NY57 414 aa18.25■□□□□ 0.51
ERBB2-214ENST00000583038 NDC80O14777 642 aa18.25■□□□□ 0.51
ERBB2-214ENST00000583038 ZEB2O60315 1214 aa18.25■□□□□ 0.51
ERBB2-214ENST00000583038 RPS8P62241 208 aaKnown RBP18.25■□□□□ 0.51
ERBB2-214ENST00000583038 STRN3Q13033 797 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms