RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 WRNIP1Q96S55 665 aa19.75■□□□□ 0.75
RNF43-206ENST00000582293 DHX36Q9H2U1 1008 aaKnown RBP19.75■□□□□ 0.75
RNF43-206ENST00000582293 EPB41L4AQ9HCS5 686 aaPredicted RBP19.75■□□□□ 0.75
RNF43-206ENST00000582293 SNCAIPQ9Y6H5 919 aa19.75■□□□□ 0.75
RNF43-206ENST00000582293 SLC4A4Q9Y6R1 1079 aa19.75■□□□□ 0.75
RNF43-206ENST00000582293 UNCXA6NJT0 531 aa19.74■□□□□ 0.75
RNF43-206ENST00000582293 GSG1L2A8MUP6 293 aa19.74■□□□□ 0.75
RNF43-206ENST00000582293 CYP2D6P10635 497 aa19.74■□□□□ 0.75
RNF43-206ENST00000582293 GJA5P36382 358 aa19.74■□□□□ 0.75
RNF43-206ENST00000582293 NMIQ13287 307 aaPredicted RBP19.74■□□□□ 0.75
RNF43-206ENST00000582293 PAXIP1Q6ZW49 1069 aaPredicted RBP19.74■□□□□ 0.75
RNF43-206ENST00000582293 JMYQ8N9B5 988 aa19.74■□□□□ 0.75
RNF43-206ENST00000582293 CNKSR2Q8WXI2 1034 aa19.74■□□□□ 0.75
RNF43-206ENST00000582293 PI4KBQ9UBF8 816 aa19.74■□□□□ 0.75
RNF43-206ENST00000582293 LAMB1P07942 1786 aa19.73■□□□□ 0.75
RNF43-206ENST00000582293 GRM1Q13255 1194 aa19.73■□□□□ 0.75
RNF43-206ENST00000582293 ELP3Q9H9T3 547 aa19.73■□□□□ 0.75
RNF43-206ENST00000582293 ATP8A2Q9NTI2 1148 aa19.73■□□□□ 0.75
RNF43-206ENST00000582293 ECE1P42892 770 aa19.72■□□□□ 0.75
RNF43-206ENST00000582293 GABPAQ06546 454 aa19.72■□□□□ 0.75
RNF43-206ENST00000582293 ZNF589Q86UQ0 364 aaPredicted RBP19.72■□□□□ 0.75
RNF43-206ENST00000582293 CCDC102AQ96A19 550 aa19.72■□□□□ 0.75
RNF43-206ENST00000582293 IL25Q9H293 177 aa19.72■□□□□ 0.75
RNF43-206ENST00000582293 HELLSQ9NRZ9 838 aa19.72■□□□□ 0.75
RNF43-206ENST00000582293 MCM9Q9NXL9 1143 aa19.72■□□□□ 0.75
RNF43-206ENST00000582293 CYP2D7A0A087X1C5 515 aa19.71■□□□□ 0.75
RNF43-206ENST00000582293 JAG1P78504 1218 aa19.71■□□□□ 0.75
RNF43-206ENST00000582293 NOL9Q5SY16 702 aaKnown RBP19.71■□□□□ 0.75
RNF43-206ENST00000582293 VPS53Q5VIR6 699 aa19.71■□□□□ 0.75
RNF43-206ENST00000582293 CTR9Q6PD62 1173 aa19.71■□□□□ 0.75
RNF43-206ENST00000582293 SLC10A4Q96EP9 437 aa19.71■□□□□ 0.75
RNF43-206ENST00000582293 WNK4Q96J92 1243 aa19.71■□□□□ 0.75
RNF43-206ENST00000582293 EHD4Q9H223 541 aa19.71■□□□□ 0.75
RNF43-206ENST00000582293 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.71■□□□□ 0.75
RNF43-206ENST00000582293 HERC5Q9UII4 1024 aaKnown RBP19.71■□□□□ 0.75
RNF43-206ENST00000582293 DOCK1Q14185 1865 aa19.71■□□□□ 0.75
RNF43-206ENST00000582293 SHROOM1Q2M3G4 852 aaPredicted RBP19.7■□□□□ 0.74
RNF43-206ENST00000582293 MCMDC2Q4G0Z9 681 aa19.7■□□□□ 0.74
RNF43-206ENST00000582293 SPRYD7Q5W111 196 aa19.7■□□□□ 0.74
RNF43-206ENST00000582293 FOXP4Q8IVH2 680 aaPredicted RBP19.7■□□□□ 0.74
RNF43-206ENST00000582293 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.7■□□□□ 0.74
RNF43-206ENST00000582293 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.7■□□□□ 0.74
RNF43-206ENST00000582293 SPDYE5A6NIY4 337 aa19.69■□□□□ 0.74
RNF43-206ENST00000582293 PATL2C9JE40 543 aaKnown RBP19.69■□□□□ 0.74
RNF43-206ENST00000582293 USP17L12C9JPN9 530 aa19.69■□□□□ 0.74
RNF43-206ENST00000582293 USP17L21D6R901 530 aa19.69■□□□□ 0.74
RNF43-206ENST00000582293 HLA-DOAP06340 250 aa19.69■□□□□ 0.74
RNF43-206ENST00000582293 GNAT2P19087 354 aa19.69■□□□□ 0.74
RNF43-206ENST00000582293 MKRN3Q13064 507 aaKnown RBP19.69■□□□□ 0.74
RNF43-206ENST00000582293 C12orf60Q5U649 245 aa19.69■□□□□ 0.74
RNF43-206ENST00000582293 TTC6Q86TZ1 520 aa19.69■□□□□ 0.74
RNF43-206ENST00000582293 OPTNQ96CV9 577 aa19.69■□□□□ 0.74
RNF43-206ENST00000582293 PHIPQ8WWQ0 1821 aa19.69■□□□□ 0.74
RNF43-206ENST00000582293 ATAD5Q96QE3 1844 aa19.69■□□□□ 0.74
RNF43-206ENST00000582293 PCNTO95613 3336 aa19.69■□□□□ 0.74
RNF43-206ENST00000582293 POLR3DP05423 398 aaPredicted RBP19.68■□□□□ 0.74
RNF43-206ENST00000582293 SHMT1P34896 483 aa19.68■□□□□ 0.74
RNF43-206ENST00000582293 MAP2K2P36507 400 aa19.68■□□□□ 0.74
RNF43-206ENST00000582293 KIF23Q02241 960 aaPredicted RBP19.68■□□□□ 0.74
RNF43-206ENST00000582293 NOGQ13253 232 aa19.68■□□□□ 0.74
RNF43-206ENST00000582293 SBK1Q52WX2 424 aa19.68■□□□□ 0.74
RNF43-206ENST00000582293 TATDN1Q6P1N9 297 aa19.68■□□□□ 0.74
RNF43-206ENST00000582293 GIMAP6Q6P9H5 292 aa19.68■□□□□ 0.74
RNF43-206ENST00000582293 CWC27Q6UX04 472 aaKnown RBP19.68■□□□□ 0.74
RNF43-206ENST00000582293 SCYL3Q8IZE3 742 aa19.68■□□□□ 0.74
RNF43-206ENST00000582293 IFNL3Q8IZI9 196 aa19.68■□□□□ 0.74
RNF43-206ENST00000582293 SERPINB13Q9UIV8 391 aa19.68■□□□□ 0.74
RNF43-206ENST00000582293 CSADQ9Y600 493 aa19.68■□□□□ 0.74
RNF43-206ENST00000582293 CTNND1O60716 968 aaKnown RBP19.67■□□□□ 0.74
RNF43-206ENST00000582293 CHMLP26374 656 aa19.67■□□□□ 0.74
RNF43-206ENST00000582293 SLC44A5Q8NCS7 719 aa19.67■□□□□ 0.74
RNF43-206ENST00000582293 DYNLL2Q96FJ2 89 aa19.67■□□□□ 0.74
RNF43-206ENST00000582293 ZBTB48P10074 688 aaPredicted RBP19.66■□□□□ 0.74
RNF43-206ENST00000582293 CAP2P40123 477 aa19.66■□□□□ 0.74
RNF43-206ENST00000582293 BMP2KLQ5H9B9 411 aa19.66■□□□□ 0.74
RNF43-206ENST00000582293 CCDC84Q86UT8 332 aaPredicted RBP19.66■□□□□ 0.74
RNF43-206ENST00000582293 ERO1BQ86YB8 467 aa19.66■□□□□ 0.74
RNF43-206ENST00000582293 CRACR2BQ8N4Y2 399 aaPredicted RBP19.66■□□□□ 0.74
RNF43-206ENST00000582293 OTUD5Q96G74 571 aa19.66■□□□□ 0.74
RNF43-206ENST00000582293 DIAPH3Q9NSV4 1193 aa19.66■□□□□ 0.74
RNF43-206ENST00000582293 CCDC171Q6TFL3 1326 aa19.66■□□□□ 0.74
RNF43-206ENST00000582293 HIP1O00291 1037 aa19.65■□□□□ 0.74
RNF43-206ENST00000582293 HSPD1P10809 573 aaKnown RBP19.65■□□□□ 0.74
RNF43-206ENST00000582293 PTPRAP18433 802 aa19.65■□□□□ 0.74
RNF43-206ENST00000582293 MS4A4AQ96JQ5 239 aa19.65■□□□□ 0.74
RNF43-206ENST00000582293 ARPP21Q9UBL0 812 aaPredicted RBP19.65■□□□□ 0.74
RNF43-206ENST00000582293 ROBO3Q96MS0 1386 aa19.65■□□□□ 0.74
RNF43-206ENST00000582293 IRF6O14896 467 aa19.64■□□□□ 0.73
RNF43-206ENST00000582293 GDF11O95390 407 aa19.64■□□□□ 0.73
RNF43-206ENST00000582293 APPP05067 770 aa19.64■□□□□ 0.73
RNF43-206ENST00000582293 WBP1LQ9NX94 342 aa19.64■□□□□ 0.73
RNF43-206ENST00000582293 TDO2P48775 406 aa19.63■□□□□ 0.73
RNF43-206ENST00000582293 PPATQ06203 517 aa19.63■□□□□ 0.73
RNF43-206ENST00000582293 PPIL2Q13356 520 aa19.63■□□□□ 0.73
RNF43-206ENST00000582293 ALX1Q15699 326 aa19.63■□□□□ 0.73
RNF43-206ENST00000582293 C16orf86Q6ZW13 317 aa19.63■□□□□ 0.73
RNF43-206ENST00000582293 TACC3Q9Y6A5 838 aa19.63■□□□□ 0.73
RNF43-206ENST00000582293 MINDY4BA8MYZ0 360 aa19.62■□□□□ 0.73
RNF43-206ENST00000582293 GUCY1A2P33402 732 aa19.62■□□□□ 0.73
RNF43-206ENST00000582293 TM4SF4P48230 202 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms