RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 HMX1Q9NP08 348 aaPredicted RBP7.89□□□□□ -1.15
TVP23B-210ENST00000582288 MUC3AQ02505 3323 aa7.89□□□□□ -1.15
TVP23B-210ENST00000582288 PLIN1O60240 522 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 ECM2O94769 699 aaPredicted RBP7.88□□□□□ -1.15
TVP23B-210ENST00000582288 MAP3K10Q02779 954 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 FKBP5Q13451 457 aaPredicted RBP7.88□□□□□ -1.15
TVP23B-210ENST00000582288 GRIK5Q16478 980 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 FAM110CQ1W6H9 321 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 TWISTNBQ3B726 338 aaPredicted RBP7.88□□□□□ -1.15
TVP23B-210ENST00000582288 G2E3Q7L622 706 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 VPS37DQ86XT2 251 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 SCYL3Q8IZE3 742 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 SMCR8Q8TEV9 937 aaPredicted RBP7.88□□□□□ -1.15
TVP23B-210ENST00000582288 SYMPKQ92797 1274 aaKnown RBP7.88□□□□□ -1.15
TVP23B-210ENST00000582288 GUCD1Q96NT3 240 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 FBXO3Q9UK99 471 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 PNMA3Q9UL41 463 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 ZMYND8Q9ULU4 1186 aaPredicted RBP7.88□□□□□ -1.15
TVP23B-210ENST00000582288 LHX6Q9UPM6 363 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 CHMP3Q9Y3E7 222 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 AFG3L2Q9Y4W6 797 aa7.88□□□□□ -1.15
TVP23B-210ENST00000582288 PHF20L1A8MW92 1017 aa7.87□□□□□ -1.15
TVP23B-210ENST00000582288 APAF1O14727 1248 aa7.87□□□□□ -1.15
TVP23B-210ENST00000582288 HRO43593 1189 aa7.87□□□□□ -1.15
TVP23B-210ENST00000582288 FRAT2O75474 233 aaPredicted RBP7.87□□□□□ -1.15
TVP23B-210ENST00000582288 COL6A1P12109 1028 aa7.87□□□□□ -1.15
TVP23B-210ENST00000582288 PTPRAP18433 802 aa7.87□□□□□ -1.15
TVP23B-210ENST00000582288 GCLCP48506 637 aaPredicted RBP7.87□□□□□ -1.15
TVP23B-210ENST00000582288 BEND3Q5T5X7 828 aa7.87□□□□□ -1.15
TVP23B-210ENST00000582288 MAP3K21Q5TCX8 1036 aa7.87□□□□□ -1.15
TVP23B-210ENST00000582288 ZNF594Q96JF6 807 aaPredicted RBP7.87□□□□□ -1.15
TVP23B-210ENST00000582288 PICK1Q9NRD5 415 aa7.87□□□□□ -1.15
TVP23B-210ENST00000582288 AGTPBP1Q9UPW5 1226 aa7.87□□□□□ -1.15
TVP23B-210ENST00000582288 ZHX2Q9Y6X8 837 aa7.87□□□□□ -1.15
TVP23B-210ENST00000582288 ATRNL1Q5VV63 1379 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 DNAH12Q6ZR08 3092 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 GRM8O00222 908 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 ENTPD3O75355 529 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 PDE8BO95263 885 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 XRCC5P13010 732 aaKnown RBP7.86□□□□□ -1.15
TVP23B-210ENST00000582288 SYN1P17600 705 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 CCDC27Q2M243 656 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 EPHA10Q5JZY3 1008 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 ZNF697Q5TEC3 545 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 TRMT44Q8IYL2 757 aaKnown RBP7.86□□□□□ -1.15
TVP23B-210ENST00000582288 PROCA1Q8NCQ7 364 aaPredicted RBP7.86□□□□□ -1.15
TVP23B-210ENST00000582288 WDR66Q8TBY9 1149 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 TBC1D2Q9BYX2 928 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 GJD2Q9UKL4 321 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 DDX60LQ5H9U9 1706 aaKnown RBP7.86□□□□□ -1.15
TVP23B-210ENST00000582288 CACNA1FO60840 1977 aa7.86□□□□□ -1.15
TVP23B-210ENST00000582288 PFASO15067 1338 aa7.85□□□□□ -1.15
TVP23B-210ENST00000582288 IL16Q14005 1332 aa7.85□□□□□ -1.15
TVP23B-210ENST00000582288 CTNND1O60716 968 aaKnown RBP7.85□□□□□ -1.15
TVP23B-210ENST00000582288 ALDH1L1O75891 902 aa7.85□□□□□ -1.15
TVP23B-210ENST00000582288 CHAF1AQ13111 956 aaPredicted RBP7.85□□□□□ -1.15
TVP23B-210ENST00000582288 PABPC4Q13310 644 aaKnown RBP eCLIP7.85□□□□□ -1.15
TVP23B-210ENST00000582288 CDC42EP5Q6NZY7 148 aa7.85□□□□□ -1.15
TVP23B-210ENST00000582288 GADL1Q6ZQY3 521 aa7.85□□□□□ -1.15
TVP23B-210ENST00000582288 ANKRD13CQ8N6S4 541 aa7.85□□□□□ -1.15
TVP23B-210ENST00000582288 VGLL2Q8N8G2 317 aa7.85□□□□□ -1.15
TVP23B-210ENST00000582288 IDI2Q9BXS1 227 aa7.85□□□□□ -1.15
TVP23B-210ENST00000582288 FAM198AQ9UFP1 575 aa7.85□□□□□ -1.15
TVP23B-210ENST00000582288 TCP10Q12799 353 aa7.84□□□□□ -1.15
TVP23B-210ENST00000582288 NFIAQ12857 509 aa7.84□□□□□ -1.15
TVP23B-210ENST00000582288 RABL6Q3YEC7 729 aaPredicted RBP7.84□□□□□ -1.15
TVP23B-210ENST00000582288 SOCS4Q8WXH5 440 aa7.84□□□□□ -1.15
TVP23B-210ENST00000582288 TSR2Q969E8 191 aaKnown RBP7.84□□□□□ -1.15
TVP23B-210ENST00000582288 LBHD1Q9BQE6 289 aaPredicted RBP7.84□□□□□ -1.15
TVP23B-210ENST00000582288 C9orf78Q9NZ63 289 aaPredicted RBP7.84□□□□□ -1.15
TVP23B-210ENST00000582288 MORF4L1Q9UBU8 362 aa7.84□□□□□ -1.15
TVP23B-210ENST00000582288 DAGLAQ9Y4D2 1042 aa7.84□□□□□ -1.15
TVP23B-210ENST00000582288 LRRFIP2Q9Y608 721 aaKnown RBP7.84□□□□□ -1.15
TVP23B-210ENST00000582288 UTYO14607 1347 aa7.83□□□□□ -1.16
TVP23B-210ENST00000582288 SALL1Q9NSC2 1324 aa7.83□□□□□ -1.16
TVP23B-210ENST00000582288 TMEM265A0A087WTH1 108 aa7.83□□□□□ -1.16
TVP23B-210ENST00000582288 TBC1D12O60347 775 aa7.83□□□□□ -1.16
TVP23B-210ENST00000582288 IFIT1P09914 478 aaKnown RBP7.83□□□□□ -1.16
TVP23B-210ENST00000582288 FGFR2P21802 821 aa7.83□□□□□ -1.16
TVP23B-210ENST00000582288 PUM3Q15397 648 aaKnown RBP7.83□□□□□ -1.16
TVP23B-210ENST00000582288 METTL24Q5JXM2 366 aa7.83□□□□□ -1.16
TVP23B-210ENST00000582288 MAFAQ8NHW3 353 aaPredicted RBP7.83□□□□□ -1.16
TVP23B-210ENST00000582288 TRIB2Q92519 343 aa7.83□□□□□ -1.16
TVP23B-210ENST00000582288 CDX2Q99626 313 aaPredicted RBP7.83□□□□□ -1.16
TVP23B-210ENST00000582288 PUS3Q9BZE2 481 aaKnown RBP7.83□□□□□ -1.16
TVP23B-210ENST00000582288 USP40Q9NVE5 1235 aa7.83□□□□□ -1.16
TVP23B-210ENST00000582288 TAOK2Q9UL54 1235 aa7.83□□□□□ -1.16
TVP23B-210ENST00000582288 IQSEC3Q9UPP2 1182 aaPredicted RBP7.83□□□□□ -1.16
TVP23B-210ENST00000582288 CDH23Q9H251 3354 aa7.83□□□□□ -1.16
TVP23B-210ENST00000582288 DOCK2Q92608 1830 aa7.82□□□□□ -1.16
TVP23B-210ENST00000582288 PTPRFP10586 1907 aa7.82□□□□□ -1.16
TVP23B-210ENST00000582288 VAMP4O75379 141 aa7.82□□□□□ -1.16
TVP23B-210ENST00000582288 COL9A1P20849 921 aa7.82□□□□□ -1.16
TVP23B-210ENST00000582288 PTPN5P54829 565 aa7.82□□□□□ -1.16
TVP23B-210ENST00000582288 SMAD3P84022 425 aaKnown RBP7.82□□□□□ -1.16
TVP23B-210ENST00000582288 MDM2Q00987 491 aaPredicted RBP7.82□□□□□ -1.16
TVP23B-210ENST00000582288 DOCK1Q14185 1865 aa7.82□□□□□ -1.16
TVP23B-210ENST00000582288 LRRC26Q2I0M4 334 aa7.82□□□□□ -1.16
TVP23B-210ENST00000582288 KAZALD1Q96I82 304 aa7.82□□□□□ -1.16
TVP23B-210ENST00000582288 NUDT12Q9BQG2 462 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms