RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 FAM155AB1AL88 458 aaPredicted RBP12.52□□□□□ -0.41
TOP3A-212ENST00000582122 TRIM6-TRIM34B2RNG4 842 aa12.52□□□□□ -0.41
TOP3A-212ENST00000582122 MBD4O95243 580 aa12.52□□□□□ -0.41
TOP3A-212ENST00000582122 MFAP1P55081 439 aaKnown RBP12.52□□□□□ -0.41
TOP3A-212ENST00000582122 MOB2Q70IA6 237 aa12.52□□□□□ -0.41
TOP3A-212ENST00000582122 MIGA2Q7L4E1 593 aa12.52□□□□□ -0.41
TOP3A-212ENST00000582122 METTL16Q86W50 562 aaKnown RBP12.52□□□□□ -0.41
TOP3A-212ENST00000582122 MAPKAPK5Q8IW41 473 aa12.52□□□□□ -0.41
TOP3A-212ENST00000582122 ZFPM1Q8IX07 1006 aa12.52□□□□□ -0.41
TOP3A-212ENST00000582122 CRACR2BQ8N4Y2 399 aaPredicted RBP12.52□□□□□ -0.41
TOP3A-212ENST00000582122 CCDC136Q96JN2 1154 aa12.52□□□□□ -0.41
TOP3A-212ENST00000582122 EHD4Q9H223 541 aa12.52□□□□□ -0.41
TOP3A-212ENST00000582122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.52□□□□□ -0.41
TOP3A-212ENST00000582122 PICK1Q9NRD5 415 aa12.52□□□□□ -0.41
TOP3A-212ENST00000582122 POLR3DP05423 398 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-212ENST00000582122 PPATQ06203 517 aa12.51□□□□□ -0.41
TOP3A-212ENST00000582122 VGLL4Q14135 290 aa12.51□□□□□ -0.41
TOP3A-212ENST00000582122 SPRYD7Q5W111 196 aa12.51□□□□□ -0.41
TOP3A-212ENST00000582122 OTUD7BQ6GQQ9 843 aa12.51□□□□□ -0.41
TOP3A-212ENST00000582122 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-212ENST00000582122 SH3BP5LQ7L8J4 393 aa12.51□□□□□ -0.41
TOP3A-212ENST00000582122 WNK4Q96J92 1243 aa12.51□□□□□ -0.41
TOP3A-212ENST00000582122 NACAP1Q9BZK3 213 aa12.51□□□□□ -0.41
TOP3A-212ENST00000582122 HELLSQ9NRZ9 838 aa12.51□□□□□ -0.41
TOP3A-212ENST00000582122 SAGE1Q9NXZ1 904 aa12.51□□□□□ -0.41
TOP3A-212ENST00000582122 SERPINB13Q9UIV8 391 aa12.51□□□□□ -0.41
TOP3A-212ENST00000582122 SPDYE5A6NIY4 337 aa12.5□□□□□ -0.41
TOP3A-212ENST00000582122 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
TOP3A-212ENST00000582122 GTF2A2P52657 109 aa12.5□□□□□ -0.41
TOP3A-212ENST00000582122 KIF23Q02241 960 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-212ENST00000582122 ZMYM1Q5SVZ6 1142 aa12.5□□□□□ -0.41
TOP3A-212ENST00000582122 CDAN1Q8IWY9 1227 aa12.5□□□□□ -0.41
TOP3A-212ENST00000582122 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
TOP3A-212ENST00000582122 LCORLQ8N3X6 602 aa12.5□□□□□ -0.41
TOP3A-212ENST00000582122 STRBPQ96SI9 672 aaKnown RBP12.5□□□□□ -0.41
TOP3A-212ENST00000582122 ARMT1Q9H993 441 aa12.5□□□□□ -0.41
TOP3A-212ENST00000582122 DCP1AQ9NPI6 582 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-212ENST00000582122 MCM9Q9NXL9 1143 aa12.5□□□□□ -0.41
TOP3A-212ENST00000582122 PALD1Q9ULE6 856 aa12.5□□□□□ -0.41
TOP3A-212ENST00000582122 SLC4A4Q9Y6R1 1079 aa12.5□□□□□ -0.41
TOP3A-212ENST00000582122 FOCADQ5VW36 1801 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 PHF20L1A8MW92 1017 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 GPAA1O43292 621 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 ASNSP08243 561 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 TM4SF4P48230 202 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 PPIL2Q13356 520 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 OSBP2Q969R2 916 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 RILPL2Q969X0 211 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 OPTNQ96CV9 577 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 CLMNQ96JQ2 1002 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 PUS7LQ9H0K6 701 aaKnown RBP12.49□□□□□ -0.41
TOP3A-212ENST00000582122 ELP3Q9H9T3 547 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 ZNF287Q9HBT7 754 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 ARPP21Q9UBL0 812 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-212ENST00000582122 SWAP70Q9UH65 585 aa12.49□□□□□ -0.41
TOP3A-212ENST00000582122 CETPP11597 493 aa12.48□□□□□ -0.41
TOP3A-212ENST00000582122 CAP2P40123 477 aa12.48□□□□□ -0.41
TOP3A-212ENST00000582122 SNAPC2Q13487 334 aa12.48□□□□□ -0.41
TOP3A-212ENST00000582122 AS3MTQ9HBK9 375 aa12.48□□□□□ -0.41
TOP3A-212ENST00000582122 ZCCHC17Q9NP64 241 aaKnown RBP12.48□□□□□ -0.41
TOP3A-212ENST00000582122 SAP30BPQ9UHR5 308 aaKnown RBP12.48□□□□□ -0.41
TOP3A-212ENST00000582122 SNCAIPQ9Y6H5 919 aa12.48□□□□□ -0.41
TOP3A-212ENST00000582122 PATL2C9JE40 543 aaKnown RBP12.47□□□□□ -0.41
TOP3A-212ENST00000582122 CXCL11O14625 94 aa12.47□□□□□ -0.41
TOP3A-212ENST00000582122 SLC3A2P08195 630 aaKnown RBP12.47□□□□□ -0.41
TOP3A-212ENST00000582122 INPP5BP32019 993 aa12.47□□□□□ -0.41
TOP3A-212ENST00000582122 MCMDC2Q4G0Z9 681 aa12.47□□□□□ -0.41
TOP3A-212ENST00000582122 SBK1Q52WX2 424 aa12.47□□□□□ -0.41
TOP3A-212ENST00000582122 TTC22Q5TAA0 569 aa12.47□□□□□ -0.41
TOP3A-212ENST00000582122 SDR42E1Q8WUS8 393 aa12.47□□□□□ -0.41
TOP3A-212ENST00000582122 RUFY2Q8WXA3 655 aa12.47□□□□□ -0.41
TOP3A-212ENST00000582122 ZKSCAN4Q969J2 545 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-212ENST00000582122 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
TOP3A-212ENST00000582122 CABP5Q9NP86 173 aa12.47□□□□□ -0.41
TOP3A-212ENST00000582122 DIAPH3Q9NSV4 1193 aa12.47□□□□□ -0.41
TOP3A-212ENST00000582122 PPP4R2Q9NY27 417 aa12.47□□□□□ -0.41
TOP3A-212ENST00000582122 FZD1Q9UP38 647 aa12.47□□□□□ -0.41
TOP3A-212ENST00000582122 TESPA1A2RU30 521 aaPredicted RBP12.46□□□□□ -0.41
TOP3A-212ENST00000582122 APPP05067 770 aa12.46□□□□□ -0.41
TOP3A-212ENST00000582122 PTPRAP18433 802 aa12.46□□□□□ -0.41
TOP3A-212ENST00000582122 SDSP20132 328 aa12.46□□□□□ -0.41
TOP3A-212ENST00000582122 TDO2P48775 406 aa12.46□□□□□ -0.41
TOP3A-212ENST00000582122 C12orf60Q5U649 245 aa12.46□□□□□ -0.41
TOP3A-212ENST00000582122 TATDN1Q6P1N9 297 aa12.46□□□□□ -0.41
TOP3A-212ENST00000582122 FASTKD5Q7L8L6 764 aaKnown RBP12.46□□□□□ -0.41
TOP3A-212ENST00000582122 CCDC17Q96LX7 622 aa12.46□□□□□ -0.41
TOP3A-212ENST00000582122 KCNH4Q9UQ05 1017 aa12.46□□□□□ -0.41
TOP3A-212ENST00000582122 MYH1P12882 1939 aa12.46□□□□□ -0.42
TOP3A-212ENST00000582122 CDK5RAP2Q96SN8 1893 aa12.46□□□□□ -0.42
TOP3A-212ENST00000582122 USP17L5A8MUK1 530 aa12.45□□□□□ -0.42
TOP3A-212ENST00000582122 GSG1L2A8MUP6 293 aa12.45□□□□□ -0.42
TOP3A-212ENST00000582122 USP17L12C9JPN9 530 aa12.45□□□□□ -0.42
TOP3A-212ENST00000582122 USP17L21D6R901 530 aa12.45□□□□□ -0.42
TOP3A-212ENST00000582122 PDE4AP27815 886 aa12.45□□□□□ -0.42
TOP3A-212ENST00000582122 GABPAQ06546 454 aa12.45□□□□□ -0.42
TOP3A-212ENST00000582122 CERKLQ49MI3 558 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-212ENST00000582122 CFHR5Q9BXR6 569 aa12.45□□□□□ -0.42
TOP3A-212ENST00000582122 NAPBQ9H115 298 aa12.45□□□□□ -0.42
TOP3A-212ENST00000582122 OTOFQ9HC10 1997 aa12.44□□□□□ -0.42
TOP3A-212ENST00000582122 M0R2C6 588 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms