RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PDE6AP16499 860 aa23.67■■□□□ 1.38
SREBF1-220ENST00000581707 EDC3Q96F86 508 aaKnown RBP23.67■■□□□ 1.38
SREBF1-220ENST00000581707 CRBNQ96SW2 442 aa23.67■■□□□ 1.38
SREBF1-220ENST00000581707 PAG1Q9NWQ8 432 aa23.67■■□□□ 1.38
SREBF1-220ENST00000581707 HERC5Q9UII4 1024 aaKnown RBP23.67■■□□□ 1.38
SREBF1-220ENST00000581707 HAUS7Q99871 368 aa23.66■■□□□ 1.38
SREBF1-220ENST00000581707 SAP30BPQ9UHR5 308 aaKnown RBP23.66■■□□□ 1.38
SREBF1-220ENST00000581707 PALD1Q9ULE6 856 aa23.66■■□□□ 1.38
SREBF1-220ENST00000581707 AFG3L2Q9Y4W6 797 aa23.66■■□□□ 1.38
SREBF1-220ENST00000581707 USP5P45974 858 aa23.65■■□□□ 1.38
SREBF1-220ENST00000581707 SP3Q02447 781 aa23.65■■□□□ 1.38
SREBF1-220ENST00000581707 FOXP4Q8IVH2 680 aaPredicted RBP23.65■■□□□ 1.38
SREBF1-220ENST00000581707 ERO1AQ96HE7 468 aa23.65■■□□□ 1.38
SREBF1-220ENST00000581707 MAGEB6P1A0A0J9YX57 407 aa23.64■■□□□ 1.37
SREBF1-220ENST00000581707 ANKRD23Q86SG2 305 aa23.64■■□□□ 1.37
SREBF1-220ENST00000581707 RIOK1Q9BRS2 568 aaKnown RBP23.64■■□□□ 1.37
SREBF1-220ENST00000581707 SIPA1L1O43166 1804 aa23.63■■□□□ 1.37
SREBF1-220ENST00000581707 ZNF532Q9HCE3 1301 aa23.63■■□□□ 1.37
SREBF1-220ENST00000581707 MYH1P12882 1939 aa23.63■■□□□ 1.37
SREBF1-220ENST00000581707 CAP2P40123 477 aa23.63■■□□□ 1.37
SREBF1-220ENST00000581707 MOGSQ13724 837 aa23.63■■□□□ 1.37
SREBF1-220ENST00000581707 METTL16Q86W50 562 aaKnown RBP23.63■■□□□ 1.37
SREBF1-220ENST00000581707 CRACR2BQ8N4Y2 399 aaPredicted RBP23.63■■□□□ 1.37
SREBF1-220ENST00000581707 TRIM34Q9BYJ4 488 aa23.63■■□□□ 1.37
SREBF1-220ENST00000581707 ECHDC1Q9NTX5 307 aa23.63■■□□□ 1.37
SREBF1-220ENST00000581707 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.63■■□□□ 1.37
SREBF1-220ENST00000581707 PHIPQ8WWQ0 1821 aa23.63■■□□□ 1.37
SREBF1-220ENST00000581707 TCRBV5S4A2TA0A5A2 114 aa23.62■■□□□ 1.37
SREBF1-220ENST00000581707 PDHXO00330 501 aa23.62■■□□□ 1.37
SREBF1-220ENST00000581707 TLR2O60603 784 aa23.62■■□□□ 1.37
SREBF1-220ENST00000581707 HLA-DOAP06340 250 aa23.62■■□□□ 1.37
SREBF1-220ENST00000581707 RRP1BQ14684 758 aaKnown RBP23.62■■□□□ 1.37
SREBF1-220ENST00000581707 FASTKD5Q7L8L6 764 aaKnown RBP23.62■■□□□ 1.37
SREBF1-220ENST00000581707 CD99L2Q8TCZ2 262 aa23.62■■□□□ 1.37
SREBF1-220ENST00000581707 ATAD5Q96QE3 1844 aa23.61■■□□□ 1.37
SREBF1-220ENST00000581707 A0A0G2JLL6 359 aaPredicted RBP23.61■■□□□ 1.37
SREBF1-220ENST00000581707 TRIM75PA6NK02 468 aa23.61■■□□□ 1.37
SREBF1-220ENST00000581707 FBXO46Q6PJ61 603 aaPredicted RBP23.61■■□□□ 1.37
SREBF1-220ENST00000581707 PRRT2Q7Z6L0 340 aaPredicted RBP23.61■■□□□ 1.37
SREBF1-220ENST00000581707 CCDC84Q86UT8 332 aaPredicted RBP23.61■■□□□ 1.37
SREBF1-220ENST00000581707 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.61■■□□□ 1.375e-7■■■■□ 20
SREBF1-220ENST00000581707 TRIM17Q9Y577 477 aa23.61■■□□□ 1.37
SREBF1-220ENST00000581707 SLC4A8Q2Y0W8 1093 aa23.6■■□□□ 1.37
SREBF1-220ENST00000581707 GPAT2Q6NUI2 795 aa23.6■■□□□ 1.37
SREBF1-220ENST00000581707 OTOP1Q7RTM1 612 aa23.6■■□□□ 1.37
SREBF1-220ENST00000581707 GPATCH3Q96I76 525 aa23.6■■□□□ 1.37
SREBF1-220ENST00000581707 CRNKL1Q9BZJ0 848 aaKnown RBP23.6■■□□□ 1.37
SREBF1-220ENST00000581707 DNAJC18Q9H819 358 aa23.6■■□□□ 1.37
SREBF1-220ENST00000581707 HPS5Q9UPZ3 1129 aa23.6■■□□□ 1.37
SREBF1-220ENST00000581707 PTPRFP10586 1907 aa23.59■■□□□ 1.37
SREBF1-220ENST00000581707 ADD2P35612 726 aa23.59■■□□□ 1.37
SREBF1-220ENST00000581707 GADL1Q6ZQY3 521 aa23.59■■□□□ 1.37
SREBF1-220ENST00000581707 USP17L5A8MUK1 530 aa23.58■■□□□ 1.37
SREBF1-220ENST00000581707 TTC6Q86TZ1 520 aa23.58■■□□□ 1.37
SREBF1-220ENST00000581707 TBC1D2Q9BYX2 928 aa23.58■■□□□ 1.37
SREBF1-220ENST00000581707 EFCC1Q9HA90 598 aa23.58■■□□□ 1.37
SREBF1-220ENST00000581707 MYH7P12883 1935 aa23.57■■□□□ 1.36
SREBF1-220ENST00000581707 SPP2Q13103 211 aa23.57■■□□□ 1.36
SREBF1-220ENST00000581707 ARHGEF6Q15052 776 aa23.57■■□□□ 1.36
SREBF1-220ENST00000581707 SLFNL1Q499Z3 407 aa23.57■■□□□ 1.36
SREBF1-220ENST00000581707 ZNF280CQ8ND82 737 aa23.57■■□□□ 1.36
SREBF1-220ENST00000581707 ASNSP08243 561 aa23.56■■□□□ 1.36
SREBF1-220ENST00000581707 CAP1Q01518 475 aa23.56■■□□□ 1.36
SREBF1-220ENST00000581707 TSHZ3Q63HK5 1081 aa23.56■■□□□ 1.36
SREBF1-220ENST00000581707 C17orf99Q6UX52 265 aa23.56■■□□□ 1.36
SREBF1-220ENST00000581707 LCORLQ8N3X6 602 aa23.56■■□□□ 1.36
SREBF1-220ENST00000581707 PARK7Q99497 189 aaKnown RBP23.56■■□□□ 1.36
SREBF1-220ENST00000581707 EHD4Q9H223 541 aa23.56■■□□□ 1.36
SREBF1-220ENST00000581707 CPA4Q9UI42 421 aa23.56■■□□□ 1.36
SREBF1-220ENST00000581707 SERPINB13Q9UIV8 391 aa23.56■■□□□ 1.36
SREBF1-220ENST00000581707 POLR3DP05423 398 aaPredicted RBP23.55■■□□□ 1.36
SREBF1-220ENST00000581707 AAMPQ13685 434 aa23.55■■□□□ 1.36
SREBF1-220ENST00000581707 UBE3CQ15386 1083 aa23.55■■□□□ 1.36
SREBF1-220ENST00000581707 ZSCAN25Q6NSZ9 544 aa23.55■■□□□ 1.36
SREBF1-220ENST00000581707 ARMT1Q9H993 441 aa23.55■■□□□ 1.36
SREBF1-220ENST00000581707 AS3MTQ9HBK9 375 aa23.55■■□□□ 1.36
SREBF1-220ENST00000581707 GINM1Q9NU53 330 aa23.55■■□□□ 1.36
SREBF1-220ENST00000581707 SLC45A1Q9Y2W3 748 aa23.55■■□□□ 1.36
SREBF1-220ENST00000581707 MBD4O95243 580 aa23.54■■□□□ 1.36
SREBF1-220ENST00000581707 GDF11O95390 407 aa23.54■■□□□ 1.36
SREBF1-220ENST00000581707 CHGBP05060 677 aa23.54■■□□□ 1.36
SREBF1-220ENST00000581707 CYP2C8P10632 490 aa23.54■■□□□ 1.36
SREBF1-220ENST00000581707 PLCD1P51178 756 aa23.54■■□□□ 1.36
SREBF1-220ENST00000581707 JAG1P78504 1218 aa23.54■■□□□ 1.36
SREBF1-220ENST00000581707 LACTBP83111 547 aaPredicted RBP23.54■■□□□ 1.36
SREBF1-220ENST00000581707 HDAC1Q13547 482 aaPredicted RBP23.54■■□□□ 1.36
SREBF1-220ENST00000581707 KIF22Q14807 665 aa23.54■■□□□ 1.36
SREBF1-220ENST00000581707 SDR42E1Q8WUS8 393 aa23.54■■□□□ 1.36
SREBF1-220ENST00000581707 WDR18Q9BV38 432 aa23.54■■□□□ 1.36
SREBF1-220ENST00000581707 MCM9Q9NXL9 1143 aa23.54■■□□□ 1.36
SREBF1-220ENST00000581707 ADGRA2Q96PE1 1338 aa23.54■■□□□ 1.36
SREBF1-220ENST00000581707 NAV1Q8NEY1 1877 aa23.53■■□□□ 1.36
SREBF1-220ENST00000581707 SHROOM1Q2M3G4 852 aaPredicted RBP23.53■■□□□ 1.36
SREBF1-220ENST00000581707 TATDN1Q6P1N9 297 aa23.53■■□□□ 1.36
SREBF1-220ENST00000581707 PROCA1Q8NCQ7 364 aaPredicted RBP23.53■■□□□ 1.36
SREBF1-220ENST00000581707 DCP1AQ9NPI6 582 aaPredicted RBP23.53■■□□□ 1.36
SREBF1-220ENST00000581707 ZBTB47Q9UFB7 747 aaPredicted RBP23.53■■□□□ 1.36
SREBF1-220ENST00000581707 AGTPBP1Q9UPW5 1226 aa23.53■■□□□ 1.36
SREBF1-220ENST00000581707 PTPN22Q9Y2R2 807 aa23.53■■□□□ 1.36
SREBF1-220ENST00000581707 HMGCS2P54868 508 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms