RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 SERPINA10Q9UK55 444 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 PHF8Q9UPP1 1060 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 CACNA1SQ13698 1873 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 NECTIN1Q15223 517 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 SEPT14Q6ZU15 432 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 CHST3Q7LGC8 479 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 GSDMBQ8TAX9 411 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 MRPS27Q92552 414 aaKnown RBP4.79□□□□□ -1.64
RTTN-206ENST00000581161 MRFAP1L1Q96HT8 127 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 ZMAT2Q96NC0 199 aaKnown RBP4.79□□□□□ -1.64
RTTN-206ENST00000581161 MYD88Q99836 296 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 ZSCAN16Q9H4T2 348 aaPredicted RBP4.79□□□□□ -1.64
RTTN-206ENST00000581161 A0A1B0GVL5 298 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 MXRA7P84157 204 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 FAM160A1Q05DH4 1040 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 TOB2Q14106 344 aaPredicted RBP4.79□□□□□ -1.64
RTTN-206ENST00000581161 INAQ16352 499 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 PRR16Q569H4 304 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 GOLPH3LQ9H4A5 285 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 SUDS3Q9H7L9 328 aaPredicted RBP4.79□□□□□ -1.64
RTTN-206ENST00000581161 TACC3Q9Y6A5 838 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 U3KPZ7 1027 aaPredicted RBP4.79□□□□□ -1.64
RTTN-206ENST00000581161 EIF4A1P60842 406 aaKnown RBP4.79□□□□□ -1.64
RTTN-206ENST00000581161 PDCLQ13371 301 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 PTPN21Q16825 1174 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 PLEKHO1Q53GL0 409 aaPredicted RBP4.79□□□□□ -1.64
RTTN-206ENST00000581161 CCDC158Q5M9N0 1113 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 FBF1Q8TES7 1133 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 CARMIL3Q8ND23 1372 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 FOCADQ5VW36 1801 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 PYGLP06737 847 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 IFFO1Q0D2I5 559 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 TERF2Q15554 542 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 WASHC4Q2M389 1173 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 PROSER3Q2NL68 480 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 HSP90AA4PQ58FG1 418 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 KSR2Q6VAB6 950 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 CCDC170Q8IYT3 715 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 GABPB2Q8TAK5 448 aaPredicted RBP4.79□□□□□ -1.64
RTTN-206ENST00000581161 AGXT2Q9BYV1 514 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 NFKBIL1Q9UBC1 381 aaPredicted RBP4.79□□□□□ -1.64
RTTN-206ENST00000581161 MYH14Q7Z406 1995 aaKnown RBP4.79□□□□□ -1.64
RTTN-206ENST00000581161 CDK5RAP2Q96SN8 1893 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 TAF1LQ8IZX4 1826 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 PRAMEF22A3QJZ6 481 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 ALDH1L1O75891 902 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 ZRANB2O95218 330 aaKnown RBP eCLIP4.79□□□□□ -1.64
RTTN-206ENST00000581161 TFCP2Q12800 502 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 CALCOCO1Q9P1Z2 691 aa4.79□□□□□ -1.64
RTTN-206ENST00000581161 MYH7P12883 1935 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 HSF2BPO75031 334 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 CDC25BP30305 580 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 RFC1P35251 1148 aaPredicted RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 RESTQ13127 1097 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 ZSCAN29Q8IWY8 852 aaPredicted RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 ACRBPQ8NEB7 543 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 LRRC59Q96AG4 307 aaKnown RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 CAPZA3Q96KX2 299 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 IFT74Q96LB3 600 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 USP28Q96RU2 1077 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 TSG101Q99816 390 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 SEC31AO94979 1220 aaKnown RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 MCM3P25205 808 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 GOLGA8FQ08AF8 430 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 GOLGA8DPQ0D2H9 430 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 CPLX4Q7Z7G2 160 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 CTAGE6Q86UF2 777 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 HVCN1Q96D96 273 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 XPO4Q9C0E2 1151 aaKnown RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 C19orf44Q9H6X5 657 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 BZW2Q9Y6E2 419 aaKnown RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 SNED1Q8TER0 1413 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 FAM13AO94988 1023 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 LMOD1P29536 600 aaPredicted RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 KRT83P78385 493 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 MSANTD4Q8NCY6 345 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 PPP1R13BQ96KQ4 1090 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 RABGAP1Q9Y3P9 1069 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.78□□□□□ -1.64
RTTN-206ENST00000581161 HNRNPCL2B2RXH8 293 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 CBFA2T2O43439 604 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 HNRNPCL1O60812 293 aaKnown RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 ZFYP08048 801 aaPredicted RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 ARID4AP29374 1257 aaPredicted RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 RAP1GDS1P52306 607 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 SCRN1Q12765 414 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 RBM43Q6ZSC3 357 aaKnown RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 EP400NLQ6ZTU2 488 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 FBXL16Q8N461 479 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 ZNF287Q9HBT7 754 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 MED23Q9ULK4 1368 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 PALM3A6NDB9 673 aaPredicted RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 MAFGO15525 162 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 USO1O60763 962 aaKnown RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 RFX5P48382 616 aaPredicted RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 HAND2P61296 217 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 ACBD5Q5T8D3 534 aaPredicted RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 IQCA1Q86XH1 822 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 AFAP1L2Q8N4X5 818 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 FAM107BQ9H098 131 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms