RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 HMX1Q9NP08 348 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-217ENST00000580654 SLC45A1Q9Y2W3 748 aa9.82□□□□□ -0.84
SMARCE1-217ENST00000580654 DOCK1Q14185 1865 aa9.82□□□□□ -0.84
SMARCE1-217ENST00000580654 DNAH12Q6ZR08 3092 aa9.81□□□□□ -0.84
SMARCE1-217ENST00000580654 ATRNL1Q5VV63 1379 aa9.81□□□□□ -0.84
SMARCE1-217ENST00000580654 IFIT5Q13325 482 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-217ENST00000580654 TJAP1Q5JTD0 557 aa9.81□□□□□ -0.84
SMARCE1-217ENST00000580654 CCDC30Q5VVM6 783 aa9.81□□□□□ -0.84
SMARCE1-217ENST00000580654 FAM151AQ8WW52 585 aa9.81□□□□□ -0.84
SMARCE1-217ENST00000580654 TRIB2Q92519 343 aa9.81□□□□□ -0.84
SMARCE1-217ENST00000580654 TMOD2Q9NZR1 351 aa9.81□□□□□ -0.84
SMARCE1-217ENST00000580654 IQSEC3Q9UPP2 1182 aaPredicted RBP9.81□□□□□ -0.84
SMARCE1-217ENST00000580654 AFG3L2Q9Y4W6 797 aa9.81□□□□□ -0.84
SMARCE1-217ENST00000580654 ARIH1Q9Y4X5 557 aaPredicted RBP9.81□□□□□ -0.84
SMARCE1-217ENST00000580654 LOC285556D6RIA3 1793 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 TMEM265A0A087WTH1 108 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 PHF20L1A8MW92 1017 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 FOSL2P15408 326 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 PTPRAP18433 802 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 NFIAQ12857 509 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 CHAF1AQ13111 956 aaPredicted RBP9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 UBE4AQ14139 1066 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 SHHQ15465 462 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 EPHA10Q5JZY3 1008 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 GADL1Q6ZQY3 521 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 FASTKD5Q7L8L6 764 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 RUNDC1Q96C34 613 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 MRIQ9BWK5 157 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 ZHX2Q9Y6X8 837 aa9.8□□□□□ -0.84
SMARCE1-217ENST00000580654 SLURP2P0DP57 97 aa9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 VASPP50552 380 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 TCP10Q12799 353 aa9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 MAP3K12Q12852 859 aa9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 FAM110CQ1W6H9 321 aa9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 C9orf50Q5SZB4 431 aa9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 TREML2Q5T2D2 321 aa9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 LDHAL6AQ6ZMR3 332 aa9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 FBXO33Q7Z6M2 555 aa9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 ZFPM1Q8IX07 1006 aa9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 SCYL3Q8IZE3 742 aa9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 SMCR8Q8TEV9 937 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 IFT57Q9NWB7 429 aa9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 FAM198AQ9UFP1 575 aa9.79□□□□□ -0.84
SMARCE1-217ENST00000580654 MYH13Q9UKX3 1938 aa9.78□□□□□ -0.84
SMARCE1-217ENST00000580654 ZNF316A6NFI3 1004 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-217ENST00000580654 HHIPL2Q6UWX4 724 aa9.78□□□□□ -0.84
SMARCE1-217ENST00000580654 LMBR1LQ6UX01 489 aa9.78□□□□□ -0.84
SMARCE1-217ENST00000580654 CCDC84Q86UT8 332 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-217ENST00000580654 PUS3Q9BZE2 481 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-217ENST00000580654 AGTPBP1Q9UPW5 1226 aa9.78□□□□□ -0.84
SMARCE1-217ENST00000580654 CHMP3Q9Y3E7 222 aa9.78□□□□□ -0.84
SMARCE1-217ENST00000580654 RLFQ13129 1914 aa9.78□□□□□ -0.84
SMARCE1-217ENST00000580654 GNAI1P63096 354 aa9.77□□□□□ -0.85
SMARCE1-217ENST00000580654 ARSIQ5FYB1 569 aa9.77□□□□□ -0.85
SMARCE1-217ENST00000580654 CDC42EP5Q6NZY7 148 aa9.77□□□□□ -0.85
SMARCE1-217ENST00000580654 TBC1D22AQ8WUA7 517 aa9.77□□□□□ -0.85
SMARCE1-217ENST00000580654 LBHD1Q9BQE6 289 aaPredicted RBP9.77□□□□□ -0.85
SMARCE1-217ENST00000580654 CNNM1Q9NRU3 951 aa9.77□□□□□ -0.85
SMARCE1-217ENST00000580654 TRIM75PA6NK02 468 aa9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 CYP2B6P20813 491 aa9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 CCND3P30281 292 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 SMAD3P84022 425 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 CACNB2Q08289 660 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 LINS1Q8NG48 757 aa9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 CCER1Q8TC90 406 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 SNX27Q96L92 541 aa9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 MYH16Q9H6N6 1097 aa9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 HCSTQ9UBK5 93 aa9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 DAGLAQ9Y4D2 1042 aa9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 ATAD5Q96QE3 1844 aa9.76□□□□□ -0.85
SMARCE1-217ENST00000580654 PEX10O60683 326 aa9.75□□□□□ -0.85
SMARCE1-217ENST00000580654 MAP3K10Q02779 954 aa9.75□□□□□ -0.85
SMARCE1-217ENST00000580654 GRIN2CQ14957 1233 aa9.75□□□□□ -0.85
SMARCE1-217ENST00000580654 CCDC57Q2TAC2 916 aa9.75□□□□□ -0.85
SMARCE1-217ENST00000580654 SH3BP5LQ7L8J4 393 aa9.75□□□□□ -0.85
SMARCE1-217ENST00000580654 DNAAF4Q8WXU2 420 aa9.75□□□□□ -0.85
SMARCE1-217ENST00000580654 PICK1Q9NRD5 415 aa9.75□□□□□ -0.85
SMARCE1-217ENST00000580654 ADAMTS8Q9UP79 889 aa9.75□□□□□ -0.85
SMARCE1-217ENST00000580654 MAST3O60307 1309 aa9.75□□□□□ -0.85
SMARCE1-217ENST00000580654 CACNA1FO60840 1977 aa9.74□□□□□ -0.85
SMARCE1-217ENST00000580654 PBX2P40425 430 aa9.74□□□□□ -0.85
SMARCE1-217ENST00000580654 FLIIQ13045 1269 aa9.74□□□□□ -0.85
SMARCE1-217ENST00000580654 DIXDC1Q155Q3 683 aa9.74□□□□□ -0.85
SMARCE1-217ENST00000580654 CCL14Q16627 93 aa9.74□□□□□ -0.85
SMARCE1-217ENST00000580654 TAF7LQ5H9L4 462 aa9.74□□□□□ -0.85
SMARCE1-217ENST00000580654 USP6NLQ92738 828 aa9.74□□□□□ -0.85
SMARCE1-217ENST00000580654 SENP6Q9GZR1 1112 aaPredicted RBP9.74□□□□□ -0.85
SMARCE1-217ENST00000580654 SUGT1Q9Y2Z0 365 aa9.74□□□□□ -0.85
SMARCE1-217ENST00000580654 RFX7Q2KHR2 1363 aa9.74□□□□□ -0.85
SMARCE1-217ENST00000580654 CACNA1AO00555 2505 aa9.74□□□□□ -0.85
SMARCE1-217ENST00000580654 XRCC5P13010 732 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-217ENST00000580654 GCLCP48506 637 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-217ENST00000580654 RTP1P59025 263 aa9.73□□□□□ -0.85
SMARCE1-217ENST00000580654 VPS37DQ86XT2 251 aa9.73□□□□□ -0.85
SMARCE1-217ENST00000580654 VGLL2Q8N8G2 317 aa9.73□□□□□ -0.85
SMARCE1-217ENST00000580654 PROCA1Q8NCQ7 364 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-217ENST00000580654 ADAMTS19Q8TE59 1207 aa9.73□□□□□ -0.85
SMARCE1-217ENST00000580654 STK31Q9BXU1 1019 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms