RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 USP28Q96RU2 1077 aa20.4■□□□□ 0.86
TMCO1-207ENST00000580248 EYA3Q99504 573 aa20.4■□□□□ 0.86
TMCO1-207ENST00000580248 SLC12A7Q9Y666 1083 aa20.4■□□□□ 0.86
TMCO1-207ENST00000580248 MYH13Q9UKX3 1938 aa20.4■□□□□ 0.86
TMCO1-207ENST00000580248 COL1A1P02452 1464 aaPredicted RBP20.39■□□□□ 0.86
TMCO1-207ENST00000580248 ERICH2A1L162 156 aa20.39■□□□□ 0.86
TMCO1-207ENST00000580248 FOSBP53539 338 aa20.39■□□□□ 0.86
TMCO1-207ENST00000580248 PPARAQ07869 468 aa20.39■□□□□ 0.86
TMCO1-207ENST00000580248 ZC3H12CQ9C0D7 883 aaKnown RBP20.39■□□□□ 0.86
TMCO1-207ENST00000580248 STK36Q9NRP7 1315 aa20.39■□□□□ 0.85
TMCO1-207ENST00000580248 GOLGA8AA7E2F4 631 aa20.39■□□□□ 0.85
TMCO1-207ENST00000580248 YEATS4O95619 227 aa20.39■□□□□ 0.85
TMCO1-207ENST00000580248 CAVIN2O95810 425 aa20.39■□□□□ 0.85
TMCO1-207ENST00000580248 MIGA1Q8NAN2 632 aa20.39■□□□□ 0.85
TMCO1-207ENST00000580248 SUPT20HQ8NEM7 779 aa20.39■□□□□ 0.85
TMCO1-207ENST00000580248 WASF1Q92558 559 aa20.39■□□□□ 0.85
TMCO1-207ENST00000580248 RIOK1Q9BRS2 568 aaKnown RBP20.39■□□□□ 0.85
TMCO1-207ENST00000580248 POLR3EQ9NVU0 708 aa20.39■□□□□ 0.85
TMCO1-207ENST00000580248 IQSEC3Q9UPP2 1182 aaPredicted RBP20.39■□□□□ 0.85
TMCO1-207ENST00000580248 MAST2Q6P0Q8 1798 aa20.38■□□□□ 0.85
TMCO1-207ENST00000580248 MSNP26038 577 aaKnown RBP20.38■□□□□ 0.85
TMCO1-207ENST00000580248 GUCY1B3Q02153 619 aa20.38■□□□□ 0.85
TMCO1-207ENST00000580248 NOL7Q9UMY1 257 aaKnown RBP20.38■□□□□ 0.85
TMCO1-207ENST00000580248 RIMBP2O15034 1052 aa20.37■□□□□ 0.85
TMCO1-207ENST00000580248 IARSP41252 1262 aaKnown RBP20.37■□□□□ 0.85
TMCO1-207ENST00000580248 WTAPQ15007 396 aa20.37■□□□□ 0.85
TMCO1-207ENST00000580248 PPP2R5BQ15173 497 aa20.37■□□□□ 0.85
TMCO1-207ENST00000580248 CCDC73Q6ZRK6 1079 aa20.37■□□□□ 0.85
TMCO1-207ENST00000580248 KCNG4Q8TDN1 519 aa20.37■□□□□ 0.85
TMCO1-207ENST00000580248 PSMD1Q99460 953 aa20.37■□□□□ 0.85
TMCO1-207ENST00000580248 SYT17Q9BSW7 474 aa20.37■□□□□ 0.85
TMCO1-207ENST00000580248 ALG1Q9BT22 464 aa20.37■□□□□ 0.85
TMCO1-207ENST00000580248 BCS1LQ9Y276 419 aa20.37■□□□□ 0.85
TMCO1-207ENST00000580248 CCDC196A0A1B0GTZ2 297 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 A0A1W2PQ27 194 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 A0A1W2PQ64 194 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 A0A1W2PQD8 194 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 NR1I2O75469 434 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 TYRO3Q06418 890 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 NTRK3Q16288 839 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 ADGRA1Q86SQ6 560 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 CCAR1Q8IX12 1150 aaKnown RBP20.36■□□□□ 0.85
TMCO1-207ENST00000580248 TDRD7Q8NHU6 1098 aaKnown RBP20.36■□□□□ 0.85
TMCO1-207ENST00000580248 ESR2Q92731 530 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 CD209Q9NNX6 404 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 IL1R1P14778 569 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 CDC27P30260 824 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 KIF23Q02241 960 aaPredicted RBP20.36■□□□□ 0.85
TMCO1-207ENST00000580248 CEBPZQ03701 1054 aaKnown RBP20.36■□□□□ 0.85
TMCO1-207ENST00000580248 MYSM1Q5VVJ2 828 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 SPTY2D1Q68D10 685 aaPredicted RBP20.36■□□□□ 0.85
TMCO1-207ENST00000580248 ADALQ6DHV7 355 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 SASS6Q6UVJ0 657 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 MICU3Q86XE3 530 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 NKX2-3Q8TAU0 364 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 FAM200AQ8TCP9 573 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 COA1Q9GZY4 146 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 TACC3Q9Y6A5 838 aa20.36■□□□□ 0.85
TMCO1-207ENST00000580248 IFNAR1P17181 557 aa20.35■□□□□ 0.85
TMCO1-207ENST00000580248 SSRP1Q08945 709 aaKnown RBP20.35■□□□□ 0.85
TMCO1-207ENST00000580248 TRIM29Q14134 588 aa20.35■□□□□ 0.85
TMCO1-207ENST00000580248 CAMK4Q16566 473 aa20.35■□□□□ 0.85
TMCO1-207ENST00000580248 RAB11FIP4Q86YS3 637 aa20.35■□□□□ 0.85
TMCO1-207ENST00000580248 NSUN4Q96CB9 384 aaKnown RBP20.35■□□□□ 0.85
TMCO1-207ENST00000580248 CCDC88AQ3V6T2 1871 aa20.35■□□□□ 0.85
TMCO1-207ENST00000580248 FMNL1O95466 1100 aaPredicted RBP20.34■□□□□ 0.85
TMCO1-207ENST00000580248 ME1P48163 572 aa20.34■□□□□ 0.85
TMCO1-207ENST00000580248 NT5C2P49902 561 aa20.34■□□□□ 0.85
TMCO1-207ENST00000580248 FAM160A1Q05DH4 1040 aa20.34■□□□□ 0.85
TMCO1-207ENST00000580248 LINC00301Q8NCQ3 95 aa20.34■□□□□ 0.85
TMCO1-207ENST00000580248 INCENPQ9NQS7 918 aa20.34■□□□□ 0.85
TMCO1-207ENST00000580248 TOMM22Q9NS69 142 aa20.34■□□□□ 0.85
TMCO1-207ENST00000580248 FAM217BQ9NTX9 383 aaPredicted RBP20.34■□□□□ 0.85
TMCO1-207ENST00000580248 FGRP09769 529 aa20.33■□□□□ 0.85
TMCO1-207ENST00000580248 STK38Q15208 465 aa20.33■□□□□ 0.85
TMCO1-207ENST00000580248 RRP12Q5JTH9 1297 aaKnown RBP20.33■□□□□ 0.85
TMCO1-207ENST00000580248 UBAC1Q9BSL1 405 aa20.33■□□□□ 0.85
TMCO1-207ENST00000580248 SENP2Q9HC62 589 aa20.33■□□□□ 0.85
TMCO1-207ENST00000580248 MRVI1Q9Y6F6 885 aa20.33■□□□□ 0.85
TMCO1-207ENST00000580248 ECM29Q5VYK3 1845 aa20.33■□□□□ 0.85
TMCO1-207ENST00000580248 PPFIA3O75145 1194 aa20.33■□□□□ 0.84
TMCO1-207ENST00000580248 KIAA2012Q0VF49 1180 aa20.33■□□□□ 0.84
TMCO1-207ENST00000580248 OTUD7BQ6GQQ9 843 aa20.33■□□□□ 0.84
TMCO1-207ENST00000580248 ENGASEQ8NFI3 743 aa20.33■□□□□ 0.84
TMCO1-207ENST00000580248 SDR42E1Q8WUS8 393 aa20.33■□□□□ 0.84
TMCO1-207ENST00000580248 VPS33BQ9H267 617 aa20.33■□□□□ 0.84
TMCO1-207ENST00000580248 MINDY4BA8MYZ0 360 aa20.32■□□□□ 0.84
TMCO1-207ENST00000580248 G3V3G9 751 aa20.32■□□□□ 0.84
TMCO1-207ENST00000580248 SF3A1Q15459 793 aaKnown RBP20.32■□□□□ 0.84
TMCO1-207ENST00000580248 DCAF8Q5TAQ9 597 aa20.32■□□□□ 0.84
TMCO1-207ENST00000580248 KRT40Q6A162 431 aa20.32■□□□□ 0.84
TMCO1-207ENST00000580248 TRIM22Q8IYM9 498 aa20.32■□□□□ 0.84
TMCO1-207ENST00000580248 MRPS27Q92552 414 aaKnown RBP20.32■□□□□ 0.84
TMCO1-207ENST00000580248 CRNKL1Q9BZJ0 848 aaKnown RBP20.32■□□□□ 0.84
TMCO1-207ENST00000580248 ATP8A2Q9NTI2 1148 aa20.32■□□□□ 0.84
TMCO1-207ENST00000580248 USP25Q9UHP3 1055 aa20.32■□□□□ 0.84
TMCO1-207ENST00000580248 PCDHA7Q9UN72 937 aa20.32■□□□□ 0.84
TMCO1-207ENST00000580248 ZKSCAN5Q9Y2L8 839 aa20.32■□□□□ 0.84
TMCO1-207ENST00000580248 SPTLC2O15270 562 aa20.31■□□□□ 0.84
TMCO1-207ENST00000580248 KINO60870 393 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms