RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 SGPL1O95470 568 aa13.13□□□□□ -0.31
CSNK1D-210ENST00000579308 UQCRFS1P1P0C7P4 283 aa13.13□□□□□ -0.31
CSNK1D-210ENST00000579308 CAP2P40123 477 aa13.13□□□□□ -0.31
CSNK1D-210ENST00000579308 SPP2Q13103 211 aa13.13□□□□□ -0.31
CSNK1D-210ENST00000579308 G3BP1Q13283 466 aaKnown RBP eCLIP13.13□□□□□ -0.31
CSNK1D-210ENST00000579308 POLA2Q14181 598 aa13.13□□□□□ -0.31
CSNK1D-210ENST00000579308 GORABQ5T7V8 394 aa13.13□□□□□ -0.31
CSNK1D-210ENST00000579308 PROCA1Q8NCQ7 364 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-210ENST00000579308 ZNF280CQ8ND82 737 aa13.13□□□□□ -0.31
CSNK1D-210ENST00000579308 U2AF1L4Q8WU68 220 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-210ENST00000579308 GPR108Q9NPR9 543 aa13.13□□□□□ -0.31
CSNK1D-210ENST00000579308 RAI14Q9P0K7 980 aa13.13□□□□□ -0.31
CSNK1D-210ENST00000579308 COL2A1P02458 1487 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-210ENST00000579308 ELNP15502 786 aa13.12□□□□□ -0.31
CSNK1D-210ENST00000579308 PPP4CP60510 307 aa13.12□□□□□ -0.31
CSNK1D-210ENST00000579308 SH3D19Q5HYK7 790 aa13.12□□□□□ -0.31
CSNK1D-210ENST00000579308 METTL16Q86W50 562 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-210ENST00000579308 ANKRD13CQ8N6S4 541 aa13.12□□□□□ -0.31
CSNK1D-210ENST00000579308 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-210ENST00000579308 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-210ENST00000579308 DPF3Q92784 378 aa13.12□□□□□ -0.31
CSNK1D-210ENST00000579308 TBC1D2Q9BYX2 928 aa13.12□□□□□ -0.31
CSNK1D-210ENST00000579308 PRO3102Q9H379 93 aa13.12□□□□□ -0.31
CSNK1D-210ENST00000579308 USP17L5A8MUK1 530 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 TNPO2O14787 897 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 INHAP05111 366 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 CAPN2P17655 700 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 ATP8B2P98198 1209 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 FAM110CQ1W6H9 321 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 TEX11Q8IYF3 940 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 SSH3Q8TE77 659 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 FRAT1Q92837 279 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 CLUAP1Q96AJ1 413 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 PAK6Q9NQU5 681 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 LRP2BPQ9P2M1 347 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 PI4KBQ9UBF8 816 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 HERC5Q9UII4 1024 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 GJD2Q9UKL4 321 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 MYH2Q9UKX2 1941 aa13.11□□□□□ -0.31
CSNK1D-210ENST00000579308 MYH13Q9UKX3 1938 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 CYP2E1P05181 493 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 GCLCP48506 637 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 HMGCS2P54868 508 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 JAG1P78504 1218 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 TNNI3KQ59H18 835 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 COA7Q96BR5 231 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 ZNF512BQ96KM6 892 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 HTATIP2Q9BUP3 242 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 WDR18Q9BV38 432 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 DHX36Q9H2U1 1008 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 SNRKQ9NRH2 765 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 FPGT-TNNI3KV9GXZ4 949 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 TRIOBPQ9H2D6 2365 aa13.1□□□□□ -0.31
CSNK1D-210ENST00000579308 IGSF3O75054 1194 aa13.09□□□□□ -0.31
CSNK1D-210ENST00000579308 FARP2O94887 1054 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-210ENST00000579308 BAG3O95817 575 aa13.09□□□□□ -0.31
CSNK1D-210ENST00000579308 NAA16Q6N069 864 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-210ENST00000579308 POTEHQ6S545 545 aa13.09□□□□□ -0.31
CSNK1D-210ENST00000579308 ADGRA1Q86SQ6 560 aa13.09□□□□□ -0.31
CSNK1D-210ENST00000579308 FOXP4Q8IVH2 680 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-210ENST00000579308 DBNDD2Q9BQY9 259 aa13.09□□□□□ -0.31
CSNK1D-210ENST00000579308 ASCC2Q9H1I8 757 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-210ENST00000579308 DNAJC18Q9H819 358 aa13.09□□□□□ -0.31
CSNK1D-210ENST00000579308 NOP58Q9Y2X3 529 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-210ENST00000579308 AK9Q5TCS8 1911 aa13.09□□□□□ -0.31
CSNK1D-210ENST00000579308 ZBTB7BO15156 539 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-210ENST00000579308 TFRCP02786 760 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-210ENST00000579308 PLCG2P16885 1265 aa13.08□□□□□ -0.32
CSNK1D-210ENST00000579308 HOXA7P31268 230 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-210ENST00000579308 BACE1P56817 501 aa13.08□□□□□ -0.32
CSNK1D-210ENST00000579308 PABPC4Q13310 644 aaKnown RBP eCLIP13.08□□□□□ -0.32
CSNK1D-210ENST00000579308 CCDC158Q5M9N0 1113 aa13.08□□□□□ -0.32
CSNK1D-210ENST00000579308 ZKSCAN2Q63HK3 967 aa13.08□□□□□ -0.32
CSNK1D-210ENST00000579308 TGFBRAP1Q8WUH2 860 aa13.08□□□□□ -0.32
CSNK1D-210ENST00000579308 DEFB118Q96PH6 123 aa13.08□□□□□ -0.32
CSNK1D-210ENST00000579308 AATFQ9NY61 560 aaKnown RBP eCLIP13.08□□□□□ -0.32
CSNK1D-210ENST00000579308 MORF4L1Q9UBU8 362 aa13.08□□□□□ -0.32
CSNK1D-210ENST00000579308 DOCK2Q92608 1830 aa13.07□□□□□ -0.32
CSNK1D-210ENST00000579308 TTC39AQ5SRH9 613 aa13.07□□□□□ -0.32
CSNK1D-210ENST00000579308 AS3MTQ9HBK9 375 aa13.07□□□□□ -0.32
CSNK1D-210ENST00000579308 PIH1D3Q9NQM4 214 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-210ENST00000579308 GINM1Q9NU53 330 aa13.07□□□□□ -0.32
CSNK1D-210ENST00000579308 PALD1Q9ULE6 856 aa13.07□□□□□ -0.32
CSNK1D-210ENST00000579308 NR2E3Q9Y5X4 410 aa13.07□□□□□ -0.32
CSNK1D-210ENST00000579308 LAMA3Q16787 3333 aa13.07□□□□□ -0.32
CSNK1D-210ENST00000579308 FLT1P17948 1338 aa13.07□□□□□ -0.32
CSNK1D-210ENST00000579308 PHIPQ8WWQ0 1821 aa13.06□□□□□ -0.32
CSNK1D-210ENST00000579308 SURF6O75683 361 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-210ENST00000579308 ASNSP08243 561 aa13.06□□□□□ -0.32
CSNK1D-210ENST00000579308 ZAP70P43403 619 aa13.06□□□□□ -0.32
CSNK1D-210ENST00000579308 MTMR2Q13614 643 aa13.06□□□□□ -0.32
CSNK1D-210ENST00000579308 SHROOM1Q2M3G4 852 aaPredicted RBP13.06□□□□□ -0.32
CSNK1D-210ENST00000579308 MAPKAPK5Q8IW41 473 aa13.06□□□□□ -0.32
CSNK1D-210ENST00000579308 P2RX7Q99572 595 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-210ENST00000579308 NOL10Q9BSC4 688 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms