RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 MCM9Q9NXL9 1143 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 A0A1B0GUL6 1792 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 TTC41PQ6P2S7 1318 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 GPR25O00155 361 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 IGF2BP3O00425 579 aaKnown RBP eCLIP7.89□□□□□ -1.15
TRAF4-213ENST00000578917 CXCL11O14625 94 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 FKTNO75072 461 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 MBD4O95243 580 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 SLURP2P0DP57 97 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 PTPRAP18433 802 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 ADD2P35612 726 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 CAP2P40123 477 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 ARHGEF6Q15052 776 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 UBE3CQ15386 1083 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 NOL9Q5SY16 702 aaKnown RBP7.89□□□□□ -1.15
TRAF4-213ENST00000578917 ZNF296Q8WUU4 475 aaPredicted RBP7.89□□□□□ -1.15
TRAF4-213ENST00000578917 PTPN18Q99952 460 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 FSD1Q9BTV5 496 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 LNPKQ9C0E8 428 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 SLC4A4Q9Y6R1 1079 aa7.89□□□□□ -1.15
TRAF4-213ENST00000578917 TCRBV5S4A2TA0A5A2 114 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 TESPA1A2RU30 521 aaPredicted RBP7.88□□□□□ -1.15
TRAF4-213ENST00000578917 CCDC85CA6NKD9 419 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 USP17L5A8MUK1 530 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 TRIM6-TRIM34B2RNG4 842 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 BTBD19C9JJ37 291 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 PDHXO00330 501 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 MPHOSPH10O00566 681 aaKnown RBP7.88□□□□□ -1.15
TRAF4-213ENST00000578917 RNF113AO15541 343 aaKnown RBP7.88□□□□□ -1.15
TRAF4-213ENST00000578917 IGHDP01880 384 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 ZFYP08048 801 aaPredicted RBP7.88□□□□□ -1.15
TRAF4-213ENST00000578917 ASNSP08243 561 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 MAP3K10Q02779 954 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 SPP2Q13103 211 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 CRHR2Q13324 411 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 KIF22Q14807 665 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 SLFNL1Q499Z3 407 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 CERKLQ49MI3 558 aaPredicted RBP7.88□□□□□ -1.15
TRAF4-213ENST00000578917 FAM43AQ8N2R8 423 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 LCORLQ8N3X6 602 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 KBTBD3Q8NAB2 608 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 OTUD7AQ8TE49 926 aaPredicted RBP7.88□□□□□ -1.15
TRAF4-213ENST00000578917 SDR42E1Q8WUS8 393 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 RIOK1Q9BRS2 568 aaKnown RBP7.88□□□□□ -1.15
TRAF4-213ENST00000578917 R3HDMLQ9H3Y0 253 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 AS3MTQ9HBK9 375 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 CABP5Q9NP86 173 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 SERPINB13Q9UIV8 391 aa7.88□□□□□ -1.15
TRAF4-213ENST00000578917 ATRNL1Q5VV63 1379 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 PRKAB2O43741 272 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 ECM2O94769 699 aaPredicted RBP7.87□□□□□ -1.15
TRAF4-213ENST00000578917 GDF11O95390 407 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 PLCD1P51178 756 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 SP3Q02447 781 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 RAB3GAP1Q15042 981 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 CTU1Q7Z7A3 348 aaKnown RBP7.87□□□□□ -1.15
TRAF4-213ENST00000578917 ANKRD23Q86SG2 305 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 CCDC84Q86UT8 332 aaPredicted RBP7.87□□□□□ -1.15
TRAF4-213ENST00000578917 CHD1LQ86WJ1 897 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 ZNF280CQ8ND82 737 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 SMCR8Q8TEV9 937 aaPredicted RBP7.87□□□□□ -1.15
TRAF4-213ENST00000578917 RILPL2Q969X0 211 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 ERO1AQ96HE7 468 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 MCOLN1Q9GZU1 580 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 DCP1AQ9NPI6 582 aaPredicted RBP7.87□□□□□ -1.15
TRAF4-213ENST00000578917 ATP8A2Q9NTI2 1148 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 TMOD4Q9NZQ9 345 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 KCNH4Q9UQ05 1017 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 AFG3L2Q9Y4W6 797 aa7.87□□□□□ -1.15
TRAF4-213ENST00000578917 MINDY4BA8MYZ0 360 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 USP17L12C9JPN9 530 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 USP17L21D6R901 530 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 GH2P01242 217 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 CHGBP05060 677 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 GNAT2P19087 354 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 PDE1AP54750 535 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 NUCB1Q02818 461 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 PABPC4Q13310 644 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRAF4-213ENST00000578917 PKN2Q16513 984 aaKnown RBP7.86□□□□□ -1.15
TRAF4-213ENST00000578917 ABCB5Q2M3G0 1257 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 NOM1Q5C9Z4 860 aaKnown RBP7.86□□□□□ -1.15
TRAF4-213ENST00000578917 SMC5Q8IY18 1101 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 PI4K2BQ8TCG2 481 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 APPBP2Q92624 585 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 EVI5LQ96CN4 794 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 ABHD8Q96I13 439 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 PARK7Q99497 189 aaKnown RBP7.86□□□□□ -1.15
TRAF4-213ENST00000578917 FEZ1Q99689 392 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 CFHR5Q9BXR6 569 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 TBC1D2Q9BYX2 928 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 NACAP1Q9BZK3 213 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 PUS7LQ9H0K6 701 aaKnown RBP7.86□□□□□ -1.15
TRAF4-213ENST00000578917 ZCCHC17Q9NP64 241 aaKnown RBP7.86□□□□□ -1.15
TRAF4-213ENST00000578917 GINM1Q9NU53 330 aa7.86□□□□□ -1.15
TRAF4-213ENST00000578917 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.86□□□□□ -1.15
TRAF4-213ENST00000578917 RFX7Q2KHR2 1363 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 ZNF646O15015 1829 aaPredicted RBP7.85□□□□□ -1.15
TRAF4-213ENST00000578917 A0A0G2JLL6 359 aaPredicted RBP7.85□□□□□ -1.15
TRAF4-213ENST00000578917 USP17L10C9JJH3 530 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 TLR2O60603 784 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms